Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq5 129 1e-24 seq9 127 5e-24 seq8 116 9e-21 seq1 111 4e-19 seq4 104 6e-17 seq17 98.7 2e-15 seq37 93.3 1e-13 seq24 89.7 1e-12 seq32 87.8 4e-12 seq43 84.2 5e-11 seq26 84.2 5e-11 >seq5 Length=88520344 Score = 129 bits (142), Expect = 1e-24 Identities = 156/208 (75%), Gaps = 6/208 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || || ||||| || || |||||||| |||||||| || ||| Sbjct 1010855 CAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTTGAGGTGGA--GCCCAGCG 1010798 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||| |||||| || || || ||||| || || || || |||||||||| Sbjct 1010797 ACACCATCGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATTCCCCCGGACCAGC 1010738 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || || || || || |||||||| || ||||| | ||||| | || || ||| Sbjct 1010737 AGCATCTGATTTTTGCTGGTAAACAGCTGGAGGATGGCTGCACTCTCTCGGACTACAACA 1010678 Query 178102 TC-CAAAAAGAATCAACACTGCATCTTG 178128 || || ||||| || || ||||| |||| Sbjct 1010677 TCACAGAAAGAGTCCACCCTGCA-CTTG 1010651 Score = 127 bits (140), Expect = 5e-24 Identities = 154/207 (74%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA--AGCTCAG 177981 || || || ||||| || || || || || || |||||||| |||||||| ||| | Sbjct 40362829 CACATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTGGAGCCAGC---G 40362773 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||| |||||| || || || ||||| || || || || |||||||||| Sbjct 40362772 ACACCATCGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATTCCCCCGGACCAGC 40362713 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || || || || || |||||||| || ||||| | ||||| | || || ||| Sbjct 40362712 AGCGTCTGATTTTTGCTGGTAAACAGCTGGAGGATGGCCGCACTCTCTCGGACTACAACA 40362653 Query 178102 TCCAAAAAGAATCAACACTGCATCTTG 178128 |||| ||||| | || ||||| |||| Sbjct 40362652 TCCAGAAAGAGCCCACCCTGCA-CTTG 40362627 >seq9 Length=72894145 Score = 127 bits (140), Expect = 5e-24 Identities = 155/208 (75%), Gaps = 9/208 (4%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 ||||| ||||| || || || || || ||| | |||||||| |||||||| || ||| Sbjct 50765880 CAAATCTTCGTAAAGACCCTGACTGGGAAAGCCATCACCCTGGAGGTGGA--GCCCAGCG 50765937 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 | ||||||||||| || || ||||| ||||| || || || ||||| || ||||||| Sbjct 50765938 ATACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCC-CCTGACCAGC 50765996 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| || || || ||||| |||||||| | |||||| | ||||| ||| Sbjct 50765997 AGAGGCTCATCTTTGCGGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACA 50766056 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 ||| ||| || || ||||| ||||| Sbjct 50766057 TCC----AGAGTCGACCCTGCACCTTGT 50766080 >seq8 Length=79101790 Score = 116 bits (128), Expect = 9e-21 Identities = 152/207 (73%), Gaps = 5/207 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || || || | || || |||||||| ||||| || || ||| Sbjct 4905553 CAGATCTTTGTGAAGACCCTGACGGCCAAGACCATCACCCTTGAGGTTGA--GCCCAGCG 4905496 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||| |||||| || || || ||||| || || || || |||||||||| Sbjct 4905495 ACACCATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATTCCCCCGGACCAGC 4905436 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || || || || || |||||||| || ||||| | ||||| || || ||| Sbjct 4905435 AGCGTCTGATTTTTGCTGGTAAACAGCTGGAGGATGGCCGCACTCTCTTGGACTACAACA 4905376 Query 178102 TCCAAAAAGAATCAACACTGCATCTTG 178128 |||| ||||| || || ||||| |||| Sbjct 4905375 TCCAGAAAGAGTCCACCCTGCA-CTTG 4905350 >seq1 Length=111700974 Score = 111 bits (122), Expect = 4e-19 Identities = 153/207 (74%), Gaps = 9/207 (4%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || || |||| || || |||||||| |||| ||| || ||| Sbjct 26898672 CACATCTTTGTGAAGACCCTGGCAGGCAAGACCATCACCCTTGAGGGGGA--GCCCAGCG 26898615 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||| |||||| || || || ||||| || || || || || |||||| Sbjct 26898614 ACACCATCGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATTCC-CCCAACCAGC 26898556 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || || || || || |||||||| || ||||| | ||||| | ||||| ||| Sbjct 26898555 AGCGTCTGATTTTTGCTGGGAAACAGCTGGAGGATGGCCGCACTCT--CGGATTACAACA 26898498 Query 178102 TCCAAAAAGAATCAACACTGCATCTTG 178128 ||| | |||| || || ||||| |||| Sbjct 26898497 TCC-AGAAGAGTCGACCCTGCA-CTTG 26898473 >seq4 Length=91125384 Score = 104 bits (114), Expect = 6e-17 Identities = 154/217 (71%), Gaps = 5/217 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCC----TCGAGGTGGAAAGCTC 177979 || || | |||||| || ||||| || || || ||||| | || |||| || ||| Sbjct 26030302 CAGATCTCCGTGAAGACCCTCACGGGGAAGACCATCACTCAGTCTCAAGGTCAAACCCTC 26030361 Query 177980 AGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCA 178039 || || | ||||| || ||| ||||| ||||||||||| ||||| ||| | || || Sbjct 26030362 GGATACGACAGAGAATGTGAAAGCCAAGATCCAGGACAAAGAGGGAATTCCTTCCGAGCA 26030421 Query 178040 GCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAA 178099 ||| | || |||| || || || ||||| ||||||||| | ||| | || || || | Sbjct 26030422 GCAGAGGCTGGTCTTTGCTGGCAAGCAGCTGGAAGATGGATGTACT-TGGCTGACTACAG 26030480 Query 178100 CGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136 | | || || | ||| || || |||||||| ||||| Sbjct 26030481 CATTCAGAAGGCATCCACTCTTCATCTTGTGCTGAGA 26030517 >seq17 Length=52410456 Score = 98.7 bits (108), Expect = 2e-15 Identities = 146/201 (73%), Gaps = 7/201 (3%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG--ACACCA 177987 || ||||| || || ||||| ||| ||||| || |||||||| || ||| || ||| Sbjct 40316406 TTTGTGAAGACCCTGACAGGCAAACTCATCACTCTTGAGGTGGA--GCCCAGCTACGCCA 40316349 Query 177988 TCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGAC 178047 |||||| |||||| || || || ||| | || || || || |||||||||||| | | Sbjct 40316348 TCGAGACTGTCAAAGCCAAAATCCAAGACCAGGAGGGCATTCC-CCGGACCAGCAATGTC 40316290 Query 178048 TTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAA 178107 | | || || || |||||||| || ||||| | ||||| | || || ||| ||| | Sbjct 40316289 TGCTTTTTGCTGGTAAACAGCTGGAGGATGGCCGCACTCTCTCGGACTACAACATCC-AG 40316231 Query 178108 AAGAATCAACACTGCATCTTG 178128 |||| || || ||||| |||| Sbjct 40316230 AAGAGTCCACCCTGCA-CTTG 40316211 >seq37 Length=21497228 Score = 93.3 bits (102), Expect = 1e-13 Identities = 103/135 (76%), Gaps = 7/135 (5%) Strand=Plus/Minus Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969 |||| || |||| |||| |||||||| || | || || ||||| |||||||| |||| Sbjct 17634919 AGGTAAAGATGC---AAATCTTCGTGAAGACCTTGACTGGGAAAACCATCACCCTGGAGG 17634863 Query 177970 TGGAAAGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027 |||| || ||| | |||||||||||||| || ||||| ||||| || || || || Sbjct 17634862 TGGA--GCCCAGCGATACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAGGGCAT 17634805 Query 178028 CCCTCCGGACCAGCA 178042 ||| || |||||||| Sbjct 17634804 CCCCCCTGACCAGCA 17634790 >seq24 Length=44670279 Score = 89.7 bits (98), Expect = 1e-12 Identities = 150/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || | |||||| || || | || || || ||| | |||||||| || ||| || Sbjct 27084141 CAGATCTCCGTGAAGACCCTTAAGGGGAAGACCATCCCTCTCGAGGTCGAGCCCTCGGAT 27084082 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | || ||||| || || |||||||||||| ||| |||||| |||| || ||||| Sbjct 27084081 AAGATAGAGAATGTGAAGGCCAAGATTCAGGAC-AAGGAGGAATTTCTCCCGATGAGCAA 27084023 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||| || || || ||||| ||||||||| | || || | || || ||| | Sbjct 27084022 CGGCTGGTCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCTGACTACAACATT 27083963 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 | | || || || || | |||||| | ||||| Sbjct 27083962 C---AGGAGTCCACTCTTCCTCTTGTGCTAAGACT 27083931 >seq32 Length=28911305 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/203 (70%), Gaps = 11/203 (5%) Strand=Plus/Plus Query 177933 GTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA--AGCTCAGACACCATCG 177990 ||||| || || ||||| || || ||||||| |||| || ||| |||||||||| Sbjct 25037127 GTGAAGACCCTGACAGGCAAGACCGTCACCCTTGAGGCTGAGCCAGC---GACACCATCG 25037183 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCC-----CTCCGGACCAGCAACG 178045 ||| |||||| || || || ||||| || || |||| | || ||||||| || Sbjct 25037184 AGACTGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCCCCTCCCCCCACCAGCAGCG 25037243 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || || | || || || ||||| || ||||| | ||||| | || || ||| |||| Sbjct 25037244 TCTGATTTCTGCTGGTAAGCAGCTGGAGGATGGCCGCACTCTCTCGGACTACAACATCCA 25037303 Query 178106 AAAAGAATCAACACTGCATCTTG 178128 ||||| || || ||||| |||| Sbjct 25037304 GAAAGAGTCCACCCTGCA-CTTG 25037325 >seq43 Length=18053166 Score = 84.2 bits (92), Expect = 5e-11 Identities = 84/108 (78%), Gaps = 1/108 (1%) Strand=Plus/Plus Query 177927 ATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACC 177986 || || ||||| || || | || ||||| |||||||||||||| || | ||||||| Sbjct 1007724 ATCTTTGTGAAGACCCTGAGGGGCAAAACCATCACCCTCGAGGTTGAGCCCAGAGACACC 1007783 Query 177987 ATCGAGAACGTCAAA-CAAAAGATTCAGGACAAAGAAGGAATCCCTCC 178033 ||| |||| | |||| | ||| ||||| ||||||||||| ||||| || Sbjct 1007784 ATCAAGAATGGCAAAGCTAAAAATTCAAGACAAAGAAGGCATCCCCCC 1007831 >seq26 Length=39178583 Score = 84.2 bits (92), Expect = 5e-11 Identities = 140/198 (71%), Gaps = 6/198 (3%) Strand=Plus/Plus Query 177933 GTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG--ACACCATCG 177990 ||||| | || ||||| || || |||||||| |||| || || ||| |||||| | Sbjct 13898404 GTGAAGCCCCTGACAGGCAAGACCATCACCCTTGAGGCTGA--GCCCAGCGACACCACTG 13898461 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 |||| || ||| || || || ||||| || || || || ||||||||||| | || | Sbjct 13898462 AGAATGTGAAAGCTAAAATCCAAGACAAGGAGGGCATTCCCCCGGACCAGCAGCCTCTGA 13898521 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 | || || || |||||| | || ||||| ||||| || || ||| |||| |||| Sbjct 13898522 TTTTTGCTGGTAAACAGTTGGAGGATGGCCACACTCTCTTGGACTACAACATCCAGAAAG 13898581 Query 178111 AATCAACACTGCATCTTG 178128 || || ||||| |||| Sbjct 13898582 GGTCCAC-CTGCA-CTTG 13898597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203601617583988