Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq316 89.7 4e-13 >seq316 Length=2809289 Score = 89.7 bits (98), Expect = 4e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 18999 TGTCAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGAT 19058 || ||||| ||||| | || |||||| | ||||| || | |||||||| || || || Sbjct 1686044 TGCCAGTTCTACGTGGTGAATGGTGAACTCTCCTGTCAGCTGTACCAGAGGTCAGGAGAC 1685985 Query 19059 ATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCG 19118 |||||||| ||||| || ||||||||||| | || || || || |||||||| | || Sbjct 1685984 ATGGGCCTGGGGGTGCCTTTCAACATTGCCAGCTACGCCCTGCTCACCTACATGATCGCA 1685925 Query 19119 CATGTTACAGGACTTAA 19135 || | ||||| || || Sbjct 1685924 CACATCACAGGCCTAAA 1685908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399461309002560