Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq44 84.2 2e-11 >seq44 Length=20396770 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/206 (69%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 28968 ATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCAGAGACG 29027 || ||||| ||||| | ||||| || ||||| || | || |||||| |||| || Sbjct 12728792 ATTTTCATAAAAACCCTCACGGGGAAGACCATCACAATC-AAGTTGAACCCTCAGACACA 12728850 Query 29028 GTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGA 29087 | | || | ||| || || ||||| ||||| | || ||||| |||||| Sbjct 12728851 ATCGTGAATGTCAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCTGATCAGCAAAGA 12728910 Query 29088 CTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAG 29147 || |||||||| || || |||||||||||| | || || | |||||||| || || Sbjct 12728911 CTCATCTTTGCTGGAAAGCAACTGGAAGATGGGCAGACCCTGTCTGATTACAACATCCAA 12728970 Query 29148 AAGGAATCTACTCTTCACATGGTGTT 29173 ||||| || ||||||||| | || || Sbjct 12728971 AAGGAGTCCACTCTTCACCTTGTATT 12728996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428290228015040