Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq316 86.0 4e-12 >seq316 Length=2809289 Score = 86.0 bits (94), Expect = 4e-12 Identities = 119/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 |||| || |||||||| | || | || | ||||| |||||||| ||||||||||| Sbjct 1685917 GTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCAATGTTGAAAGGCACCCCC 1685976 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCA-TCACACACATA 97235 || ||||| || |||| || || || | ||||||||| || | ||| |||| ||| || Sbjct 1685977 AGGCCCATGTCTCCTGACCTCTGGTACAGCTGACAGGAGAGTTCACCATTCAC-CACGTA 1686035 Query 97236 AAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAA 97279 ||||| | | |||| ||||| |||| ||||| | |||| Sbjct 1686036 GAACTGGCAAAGGGCATGGCAGGGTGGCAGGGCCATCTGAGGAA 1686079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346746942661760