Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq146 91.5 2e-13 >seq146 Length=8840894 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| ||||||| ||||| ||||| || || || | ||| | ||| | | Sbjct 7957751 ATGCAAATCTTTGTAAAGACCCTAACTGGCAAGACCATCACCCTGGAGGTGGAACCCAGC 7957810 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 |||| | ||| |||| || || || ||||| || || || ||||| || || Sbjct 7957811 AATACCAAAAAGAATGTAAAGGCCAAGATCCAGGATAAGGAGGGCATCCCACCCGACCAG 7957870 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||||| || ||||||||||| || | || ||| | | ||| | | || || Sbjct 7957871 CAGAGGCTCATCTTTGCAGGAAAGCAGCTGGAAGATGGCCACACACTTTCTCACTACAAC 7957930 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || ||||| |||||| |||| || || | | | | |||||||||| Sbjct 7957931 ATCCAGAAAGAGTCAACTCTGCACTTCGTCCTTCATCTGAGAGGTGGTAT 7957980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755373202022400