Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq61 369 5e-97 seq80 340 2e-88 seq76 268 1e-66 seq94 212 8e-50 seq11 172 7e-38 seq1060 141 1e-28 seq47 116 5e-21 seq223 114 2e-20 seq44 109 7e-19 seq202 102 1e-16 seq86 95.1 2e-14 seq8 93.3 5e-14 >seq61 Length=17507673 Score = 369 bits (408), Expect = 5e-97 Identities = 396/521 (76%), Gaps = 6/521 (1%) Strand=Plus/Minus Query 188142 TCGCCACCATGGTCA-CACCGAGCCTCTG----CGTGCTCCTCCATCGAGGACGACTTCA 188196 ||||| |||||| || | | || ||||| | | ||| || |||||||| ||||||| Sbjct 8865694 TCGCCGCCATGGCCAGCTCAGACCCTCTCTACCCATCCTCGTCGATCGAGGATGACTTCA 8865635 Query 188197 ACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCACATACGAATGGCATTTCTAAGAAAAG 188256 |||||| ||||| ||||| || |||||||||||||| |||||||| ||||||||||| | Sbjct 8865634 ACTATGGCAGCTGCGTGGCCTCGGCCAGCGTGCACATCCGAATGGCTTTTCTAAGAAAGG 8865575 Query 188257 TCTACGGTATCCTTG-TCTACAATTTCCTTTAACAACGGCAACAGCTGCAGTATTTTTAT 188315 | || | | | || ||| ||| ||| || || || | ||| | | || ||||||| Sbjct 8865574 TTTATAGCACCTTTTCTCTGCAAGTTCTCTTGACTACAGTGACATGTTCCGTGTTTTTAT 8865515 Query 188316 ACTTTGAATGCATTCGGACATTTATACAAGGGAGTCCTGTTCTAATATTGGCATCAATGT 188375 ||||||| | || ||||||||| | || | |||||||| ||| || |||| | Sbjct 8865514 ACTTTGAGTCTATACGGACATTTGTGCATGAGAGTCCTGCTCTCATTTTGGTGTTTGCCC 8865455 Query 188376 TCGGATCTATAGGCTTGATTTTCGCATTGACTTTACACAGACATAAACATCCCCTGAATC 188435 | |||||| | || |||||||||||||||| | |||||||||| |||||||| ||| Sbjct 8865454 TTGGATCTTTGGGTATGATTTTCGCATTGACACTGAACAGACATAAGCATCCCCTTAATT 8865395 Query 188436 TGTACCTACTTTGTGGATTTACACTGTTAGAATCTCTAACGCTGGCCTCTGTTGTTACTT 188495 | ||||| |||| |||||||||||| || ||| |||| || ||||| ||||||||||| Sbjct 8865394 TATACCTGCTTTTTGGATTTACACTATTGGAAGCTCTGACTGTGGCCATTGTTGTTACTT 8865335 Query 188496 TCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTTCTTGCTC 188555 ||||||||| ||| ||| |||||||||| | ||||| |||||||| ||||||| Sbjct 8865334 TCTATGATGTCTATATTGTTCTACAAGCTTTTACATTGACAACTGCAGTATTTCTTGGCT 8865275 Query 188556 TGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGGATTGTTTG 188615 ||||| ||| |||||||| ||||||| |||||| || ||| ||| | |||| ||||| Sbjct 8865274 TGACTGCATACACTCTACAGTCAAAGAAAGATTTTAGCAAATTTGGAGCAGGGCTGTTTA 8865215 Query 188616 CTGCTTTCTGGATTTTAATTTTGTCAGGAGTCTTGAGGATA 188656 | | ||| |||||||| ||||||||| |||| ||| || Sbjct 8865214 CGGTTTTGTGGATTTTGTGCTTGTCAGGATTCTTAAGGTTA 8865174 >seq80 Length=14032783 Score = 340 bits (376), Expect = 2e-88 Identities = 387/515 (75%), Gaps = 7/515 (1%) Strand=Plus/Plus Query 188142 TCGCCACCATGGTCA-CACCGAGCCTCTG----CGTGCTCCTCCATCGAGGACGACTTCA 188196 ||||| |||||| || | | || ||||| | | ||| || |||||||| ||||||| Sbjct 10810505 TCGCCGCCATGGCCAGCTCAGACCCTCTCTACCCATCCTCGTCAATCGAGGATGACTTCA 10810564 Query 188197 ACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCACATACGAATGGCATTTCTAAGAAAAG 188256 |||||| ||||| ||||| || |||||||||||||| |||||||| ||||||||||| | Sbjct 10810565 ACTATGGCAGCTGCGTGGCCTCGGCCAGCGTGCACATGCGAATGGCTTTTCTAAGAAAGG 10810624 Query 188257 TCTACGGTATCCTTG-TCTACAATTTCCTTTAACAACGGCAACAGCTGCAGTATTTTTAT 188315 | || | ||| || ||| ||| ||| || || || | ||| | | || ||||||| Sbjct 10810625 TTTATAGCATCTTTTCTCTGCAAGTTCTCTTGACTACAGTGACATGTTCCGTGTTTTTAT 10810684 Query 188316 ACTTTGAATGCATTCGGACATTTATACAAGGGAGTCCTGTTCTAATATTGGCATCAATGT 188375 ||||||| | || ||||||||| | | | ||| |||| ||| || |||| | Sbjct 10810685 ACTTTGAGTCTATACGGACATTTGTGGATGAGAGCCCTGCTCTCATTTTGGTGTTTGCCC 10810744 Query 188376 TCGGATCTATAGGCTTGATTTTCGCATTGACTTTACACAGACATAAACATCCCCTGAATC 188435 | |||||| | || |||||||| ||||||| | |||||||||| |||||||| ||| Sbjct 10810745 TTGGATCTTTGGGTATGATTTTCACATTGACACTGAACAGACATAAGCATCCCCTTAATT 10810804 Query 188436 TGTACCTACTTTGTGGATTTACACTGTTAGAATCTCTAACGCTGGCCTCTGTTGTTACTT 188495 | ||||| |||| |||||||||||| || ||| |||| || ||||| ||||||| ||| Sbjct 10810805 TATACCTGCTTTTTGGATTTACACTATTGGAAGCTCTGACTGTGGCCATTGTTGTTCCTT 10810864 Query 188496 TCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTTCTTGCTC 188555 ||||||||| ||| ||| |||||||||| || ||||| |||||||| ||||||| Sbjct 10810865 TCTATGATGTATATATTGTTCTACAAGCTTTTATATTGACAACTGCAGTATTTCTTGGCT 10810924 Query 188556 TGACTACATGTACTCTACAATCAAAGAGAGA-TTTCAGTAAACTTGTAACAGGATTGTTT 188614 ||||| ||| |||||||||||||||| ||| ||| | ||| ||| | |||| | ||| Sbjct 10810925 TGACTGCATACACTCTACAATCAAAGAAAGATTTTTATCAAATTTGGAGCAGGGCTCTTT 10810984 Query 188615 GCTGCTTTCTGGATTTTAATTTTGTCAGGAGTCTT 188649 | | ||| |||||||| ||| ||||| |||| Sbjct 10810985 ACAGTTTTGTGGATTTTGTGCTTGCCAGGATTCTT 10811019 >seq76 Length=15298453 Score = 268 bits (296), Expect = 1e-66 Identities = 375/519 (72%), Gaps = 14/519 (3%) Strand=Plus/Minus Query 188142 TCGCCACCATGGTCA-CACCGAGCCTCTG----CGTGCTCCTCCATCGAGGACGACTTCA 188196 ||||||| ||||||| | | || |||| | | ||| | |||||||| ||||||| Sbjct 1553265 TCGCCACAATGGTCAGCTCAGACCCTCACTACCCATCCTCGTTGATCGAGGATGACTTCA 1553206 Query 188197 ACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCACATACGAATGGCATTTCTAAGAAAAG 188256 |||| | ||||| ||||| | |||||||||||||| |||| || |||| |||||||| Sbjct 1553205 ACTACGGCAGCTGTGTGGCCTTGGCCAGCGTGCACATCCGAAGAGCTTTTC-AAGAAAAG 1553147 Query 188257 TCTACGGTATCC-TTGTCTACAATTTCCTTTAACAACGGCAACA-GCTGCAGTATTTTT- 188313 | || | ||| || ||| ||| ||| || || || | |||| ||| | | ||||| Sbjct 1553146 TATA--GCATCTGTTCTCTGCAAGTTCTCTTGACCACAGTAACATGCTCCCTTTTTTTTT 1553089 Query 188314 ---ATACTTTGAATGCATTCGGACATTTATACAAGGGAGTCCTGTTCTAATATTGGCATC 188370 ||||||||| | ||| |||||||| | || | ||| ||| || || ||| | Sbjct 1553088 TTTATACTTTGAGTCCATATGGACATTTGTGCATGAGAGCGCTGCCCTCATTCTGGTGTT 1553029 Query 188371 AATGTTCGGATCTATAGGCTTGATTTTCGCATTGACTTTACACAGACATAAACATCCCCT 188430 | |||||| | || ||||||| ||||||| | |||||||||| |||||||| Sbjct 1553028 TGCCCTTGGATCTTTGGGTAGGATTTTCCCATTGACACTGAACAGACATAAGCATCCCCT 1552969 Query 188431 GAATCTGTACCTACTTTGTGGATTTACACTGTTAGAATCTCTAACGCTGGCCTCTGTTGT 188490 || | ||| | |||| |||||||||| | || ||| |||| || | ||| |||||| Sbjct 1552968 TAACTTATACTTGCTTTTTGGATTTACATTATTGGAAGCTCTGACTGTAGCCATTGTTGT 1552909 Query 188491 TACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTTCT 188550 |||||||||||| ||| ||| || |||||| || ||||| |||||||| ||||| Sbjct 1552908 TACTTTCTATGACATATATATTGTTCTATTAGCTTTAATATTGACAACTGCAGTATTTCT 1552849 Query 188551 TGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGGATT 188610 || ||| | ||| ||||||||||||||||| || ||| || ||| ||| | |||| | Sbjct 1552848 TGGATTGAATGCATATACTCTACAATCAAAGAAAGTTTTTAGCAAATTTGGAGCAGGGCT 1552789 Query 188611 GTTTGCTGCTTTCTGGATTTTAATTTTGTCAGGAGTCTT 188649 |||| | ||| |||||||| ||||||||| |||| Sbjct 1552788 GTTTAGGGTTTTGTGGATTTTCTGCTTGTCAGGATTCTT 1552750 >seq94 Length=13213440 Score = 212 bits (234), Expect = 8e-50 Identities = 413/603 (68%), Gaps = 18/603 (3%) Strand=Plus/Plus Query 33567 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCG 33626 ||||| |||| || || || || ||||| | || || ||||| ||| | | ||| Sbjct 4997813 TGTTTGAACAGCAGGTGAGCAAAGTCACAGTGTAAGCCTTCATCTCTGCTAGTAAGTTCA 4997872 Query 33627 TTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAAT 33686 | ||||| ||||| || |||| || | | || || ||||| ||||| || || || Sbjct 4997873 CTGGAAAATGTGAGGCCAGGCACCAGTTCTCATTTCTTGAGCCAGAATATTGATGCAAAA 4997932 Query 33687 GATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCG 33746 || | ||| |||||||||||| ||||| |||||||| | | |||||||| || | Sbjct 4997933 GAACTGGA---GAAGATTCCTTCCACTGCTGCAAAGGCTACGACACTCTCTCCGTA---G 4997986 Query 33747 GCGCTGTCAT-GTATCCA---CTTTTGA--GCCCAATCGGCCTTCTTTTTTACACAAGGC 33800 | | || | || ||| | | ||||| || || ||| |||||||| ||| Sbjct 4997987 GTAATTTCTTTGTTCCCAGCCCAACGCAAGGCCCAGTCTGCTGCCTTCTTTACACAGGGC 4998046 Query 33801 ATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCG 33860 || ||||| |||||||| | |||| | | ||| ||| |||||||| || || Sbjct 4998047 ATTGTTTCAATGGCATTGATGAGAAATTCCCATTCCTTAGGATCTTTAAT----GTGTCA 4998102 Query 33861 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAA 33920 || | |||||||||||||| ||||| |||||||| ||||| || || || || |||||| Sbjct 4998103 ATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAA 4998162 Query 33921 CATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACT 33980 || | || || |||||||| |||||| | ||| || || | | |||||||||||| Sbjct 4998163 CAGCGGGCTTCTGTAATCTGGACTTCTTGGCTAAACCGCTCCACCAGGTTTTCATTCACT 4998222 Query 33981 ATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGT 34040 | |||||||| || ||||| || |||| ||||| |||||| || | || || | Sbjct 4998223 GTGCCATCACTTGCAGCAAAGAAGGCCAGAACATGGGATATAAAGTAACTCTCCTCAGAC 4998282 Query 34041 GTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCA-CTTCTTCCACTGTCCAAAA 34099 | || | ||| | | || ||||| || | ||| | || ||| | | ||||| Sbjct 4998283 TTAAGGGCTTCCCAGTGCTAAATGTCTTTGGAAAGATCAATCTCCTTGGTGT-TTCAAAA 4998341 Query 34100 TGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAAC 34159 || |||| || || ||| |||| | ||| |||||||| |||| | || |||| || Sbjct 4998342 GGAAGCCTGAGCTTTCTTAGACATCTGCCAAATGTCATGGTATTCAACAGGAAAAACGAC 4998401 Query 34160 AAA 34162 ||| Sbjct 4998402 AAA 4998404 >seq11 Length=32252908 Score = 172 bits (190), Expect = 7e-38 Identities = 288/425 (68%), Gaps = 35/425 (8%) Strand=Plus/Plus Query 33567 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCG 33626 ||||| |||| | || || || || ||||| | |||||| ||||||| || | ||| Sbjct 31685059 TGTTTGAACACTAGGCAAGCAAAGTCACAGTGTACACCCTCAACTCTACTCATAAGTTCA 31685118 Query 33627 TTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAAT 33686 || ||||| ||| | || ||| |||| || | || || ||||| ||||| | | || Sbjct 31685119 TTGGAAAATGTGGGGCCAGGCCTTAGTCCTCATTTCTTGAGCCAGAATATTGGCACAAA- 31685177 Query 33687 GATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCG 33746 || | ||| ||||||||||||| ||||| || ||||| | || | | ||||| | | Sbjct 31685178 GAAGCAGAACAGAAGATTCCTTCCACTGCTGCCAAGGCTACAACACGTTTTCCATCAGCA 31685237 Query 33747 GCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTT 33806 || ||||| |||||||| |||||| || Sbjct 31685238 GC----------------------------------TTCTTCTTTACACAGGGCATCATT 31685263 Query 33807 TCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAA 33866 || |||||||| |||||| | | ||| ||| |||||||| ||||| || || | Sbjct 31685264 TCAATGGCATTGAAGAGAAATTCCCATTCCTTAGGATCTTTAATGTAAGTGTCAATAAGG 31685323 Query 33867 AGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTA 33926 |||||||||||||| ||||| |||||||| | ||| || || || || ||||||| | Sbjct 31685324 AGACTATACATTTCAGAATGTATGTTTTCCAAGGCAATTTGGAAGCCACAGAAACAGTGA 31685383 Query 33927 GCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCA 33986 || || |||||| |||||| | ||| ||||||| | ||||| |||||||| ||| Sbjct 31685384 GCTTCTGTAATCCAGACTTCTTGGCTAAACCGTTCTGTCAGGTTTTCGTTCACTATGCCA 31685443 Query 33987 TCACT 33991 ||||| Sbjct 31685444 TCACT 31685448 >seq1060 Length=13830 Score = 141 bits (156), Expect = 1e-28 Identities = 166/221 (75%), Gaps = 9/221 (4%) Strand=Plus/Minus Query 188436 TGTACCTACTTTGTGGATTTACACTGTTAGAATCTCTAACGCTGGCCTCTGTTGTTACTT 188495 |||||| ||||| |||||||| |||| ||| ||| | ||||| ||||| ||| Sbjct 12300 TGTACCGACTTTTTGGATTTATGGTGTTGGAAGCTCAGCCTGTGGCCA---TTGTTCCTT 12244 Query 188496 TCTATGATGCGCG-TATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTTCTTGCT 188554 ||||||||| | ||| | ||||||||||||| ||||| |||| ||| |||||||| Sbjct 12243 TCTATGATGGAAGCTAT---TCTACAAGCTTTCATATTGACAACTGGAGTATTTCTTGCC 12187 Query 188555 CTGACTACATGTACTCTACAATCAAAGA--GAGATTTCAGTAAACTTGTAACAGGATTGT 188612 | ||| ||| ||||||||||||||||| |||||| || ||| || | ||||| ||| Sbjct 12186 TTTACTGCATATACTCTACAATCAAAGATTAAGATTTTAGCAAATCTGGAGCAGGACTGT 12127 Query 188613 TTGCTGCTTTCTGGATTTTAATTTTGTCAGGAGTCTTGAGG 188653 || | | ||| || ||||| ||| |||||| |||| ||| Sbjct 12126 TTACAGTTTTGTGAATTTTGTGTTTATCAGGATTCTTAAGG 12086 >seq47 Length=20092007 Score = 116 bits (128), Expect = 5e-21 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 188489 GTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTT 188548 |||||||||||||||| ||| ||| |||||||||| || ||||| |||||||| ||| Sbjct 11098078 GTTACTTTCTATGATGTCTATATTGTTCTACAAGCTTTTATATTGACAACTGCAGTATTT 11098019 Query 188549 CTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGG 188607 |||| ||||| ||| ||||||||| ||||||| |||||| || ||| ||| | |||| Sbjct 11098018 CTTGGCTTGACTGCATATACTCTACAGTCAAAGAAAGATTTTAGCAAATTTGGAGCAGG 11097960 Score = 86.0 bits (94), Expect = 8e-12 Identities = 83/105 (79%), Gaps = 5/105 (5%) Strand=Plus/Minus Query 188142 TCGCCACCATGGTCA-CACCGAGCCTCTG----CGTGCTCCTCCATCGAGGACGACTTCA 188196 ||||| |||||| || | | || ||||| | | ||| || |||||||| ||||||| Sbjct 11112334 TCGCCGCCATGGCCAGCTCAGACCCTCTCTACCCATCCTCGTCGATCGAGGATGACTTCA 11112275 Query 188197 ACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCACATACGAATGG 188241 |||||| ||||| ||||| || |||||||||||||| ||||||| Sbjct 11112274 ACTATGGCAGCTGCGTGGCCTCGGCCAGCGTGCACATCCGAATGG 11112230 >seq223 Length=5023716 Score = 114 bits (126), Expect = 2e-20 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||| ||||| ||||| | ||| || ||||||||||| || ||||| || || || || | Sbjct 3965826 CCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGTCCTCGTTTCT 3965767 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 | ||||| ||||| || || || || || ||||||||||||||||| ||||| ||||||| Sbjct 3965766 TGAGCCAGAATATTGACGCAAAAGAACCAGAAAAGAAGATTCCTTCAACTGCTGCAAAGG 3965707 Query 33724 C 33724 | Sbjct 3965706 C 3965706 Score = 105 bits (116), Expect = 8e-18 Identities = 87/106 (82%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 33842 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33901 |||||||| ||||||||| || | |||||||||||||| ||||| |||||||| ||||| Sbjct 3962640 ATCTTTAATATAAGTATCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 3962581 Query 33902 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCT 33947 || || || || |||||||| | ||| || |||| ||| |||||| Sbjct 3962580 AATTTGGAAGCCATAGAAACAGCGAGCTTCTGTAACCTGGACTTCT 3962535 Score = 95.1 bits (104), Expect = 2e-14 Identities = 110/148 (74%), Gaps = 3/148 (2%) Strand=Plus/Minus Query 33226 TTATGTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAA 33282 || |||| |||| ||||| |||| || | ||| ||| ||| | || ||||| | Sbjct 3966827 TTCTGTTCATTTAGAAGTCCGCATCCAAGGTGAAAGAATTCTCTGTTGGACTCGACATCA 3966768 Query 33283 CTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATG 33342 ||||||| || || || || || || || || || || || ||||| || ||||||| || Sbjct 3966767 CTCCCATCTTCTGATACTCGCCTACGCGCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTG 3966708 Query 33343 ATATATTTTCCATGAAATCAAACGGATT 33370 | ||||| ||||| |||||||||||||| Sbjct 3966707 AAATATTCTCCATAAAATCAAACGGATT 3966680 >seq44 Length=20396770 Score = 109 bits (120), Expect = 7e-19 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 63263 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCT 63322 || |||||||||||| ||||| || ||||||||||| || | ||||||||| || | | Sbjct 12616085 CTCCACTCGTTTCATGAAGAGGTCTGGAATCCAAAGGGCAAAAAATAGATCCCTGGCACG 12616144 Query 63323 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63382 ||||| || ||||| || ||||| || | ||| |||||| | | || || ||||||| Sbjct 12616145 CTGTTCTTCCTTTCCCGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCA 12616204 Query 63383 CGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63415 || |||||||| || || | ||||||| || Sbjct 12616205 TGGCTCCAAGTAAATAGCAAATGCTCCAGGTCG 12616237 Score = 105 bits (116), Expect = 8e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 62113 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62172 |||| ||||| ||||||||||| || |||||| ||| | || || || || ||||| | Sbjct 12594163 TCCAGCCGTAGAAATGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 12594222 Query 62173 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62232 ||| ||| || |||||||| ||||| || || || || || ||||| || | | || | Sbjct 12594223 TCAGAGACTGGCTTTGATCTATGAAAGCCCCTCTCTCAGCTGCCATCTTGAGTACGGTTT 12594282 Query 62233 TTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62283 |||| | ||||||||| | || ||||||| |||| | || || |||| Sbjct 12594283 TTTGAGAAATTTCCCACACCGTCTTATAAAGCTGCTTCAAGTCATCGGGAA 12594333 Score = 105 bits (116), Expect = 8e-18 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 62387 TACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62446 ||| || ||||| || ||||| |||| |||||||| || || |||||||| | ||| | Sbjct 12601427 TACCTGAAATTCCCCTGACAAGACTCGGCGAGTGTAGATGTTGCTGGTATAAGCTTCAAT 12601486 Query 62447 CGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62506 ||||||||||| || | || ||||||||||| ||||| ||||| || || | | ||| Sbjct 12601487 AGACTCATTATTCCCAAGTATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAA 12601546 Query 62507 ACTATTTCTAAGACCGTA 62524 ||| ||||| | ||| || Sbjct 12601547 ACTGTTTCTTACACCATA 12601564 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 63657 CGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGT 63716 ||| | || || ||||| || | |||||||||||| || |||||||| || ||||| || Sbjct 12623874 CGATTGGTCCCAGCATTGAAGAGGGTAGGAGAAGCATGAGTAAACCACTTCTCAGACAGA 12623933 Query 63717 AGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGC 63776 || ||||| || |||||||| | || ||||| || ||||| || || | || | | Sbjct 12623934 AGGTTGTATGTTTCAATAGCAGCATCAATATCTTCTTTGTGAATCCCGACAGATACCCTC 12623993 Query 63777 ATTAACATGTGCTGAGGTCTTTCA 63800 || | ||| ||||| ||||||||| Sbjct 12623994 ATCAGCATATGCTGTGGTCTTTCA 12624017 Score = 95.1 bits (104), Expect = 2e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 62619 GATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAAT 62678 || ||| |||| || || || || || || || ||| |||| |||||| || || || Sbjct 12613386 GAGCCTTCATAGGTTTCGTAAGGGCCAAGCTCCTTAGCCAGTTCACAACTGGCTTCCAAA 12613445 Query 62679 GCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCA 62738 || || ||||||||||||||||| || | ||||| || || || || || || ||| Sbjct 12613446 GCTCCATAATAAATGGTTTCAAATATTTGTTTATTCAGTAACTGGGCCTCTGGACTCTCA 12613505 Query 62739 AATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGT 62798 || ||||| | | || || || || || |||| ||||| || ||||| || || || Sbjct 12613506 AAAGGATATCTCATCAGGATGAAAGCATCTGCTAGACCTTGGACCCCAATTCCAATGGGA 12613565 Query 62799 CTATGTCTCTTATTAGA 62815 | ||| | ||||| || Sbjct 12613566 CGATGGCGTTTATTTGA 12613582 >seq202 Length=5697000 Score = 102 bits (112), Expect = 1e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 33606 TCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33665 || ||||| || || | ||| || ||||| |||||||| ||||| ||||| | ||| || Sbjct 3890747 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCAGGCATAAGGCCTCTCTTCTTC 3890688 Query 33666 AGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33724 ||||| || || | ||| || ||||| || ||||| ||||||||||| || |||||||| Sbjct 3890687 AGCCAGAAAATCGCAGCAAAAGATCCAGAGAAGAAAATTCCTTCTACAGCCGCAAAGGC 3890629 Score = 91.5 bits (100), Expect = 2e-13 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 34080 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 34139 || ||||||||||||||||| ||||||| ||| | ||||||||| ||||| || || | Sbjct 3875706 ACCTCTTCCACTGTCCAAAAGGATGCCTGTGCTTGTTTATACATCTTCCAAATATCCGGG 3875647 Query 34140 TATTGGATTGGGAAAATAACAAATC 34164 || ||||||||||| || ||||||| Sbjct 3875646 TACTGGATTGGGAAGATGACAAATC 3875622 >seq86 Length=13901021 Score = 95.1 bits (104), Expect = 2e-14 Identities = 107/142 (75%), Gaps = 1/142 (1%) Strand=Plus/Minus Query 188182 TCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCACATACGAATGG 188241 ||||||| ||||||||||||| ||||| | ||| | |||||||||||||| ||||| Sbjct 2684114 TCGAGGATGACTTCAACTATGGCAGCTGTGCGGCCTTGGCCAGCGTGCACATCTGAATGA 2684055 Query 188242 CATTTCTAAGAAAAGTCTACGGTATC-CTTGTCTACAATTTCCTTTAACAACGGCAACAG 188300 | |||||||||||||| || | ||| || ||| ||| ||| || || | | || Sbjct 2684054 CTTTTCTAAGAAAAGTTTATAGCATCTTTTCTCTGCAAGTTCTCTTGACTGCAGTGACTT 2683995 Query 188301 CTGCAGTATTTTTATACTTTGA 188322 | | || |||||||||||||| Sbjct 2683994 GTTCTGTGTTTTTATACTTTGA 2683973 >seq8 Length=38200284 Score = 93.3 bits (102), Expect = 5e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 33966 AAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 34025 ||||||||||| || ||||||||||||||||||||||| || || | || |||||| Sbjct 15304836 AAATTTTCATTTACAATTCCATCACTGGCTGCAAAAAAGGCTAAGATGTGAGAGATAAAA 15304895 Query 34026 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCT 34085 || || || |||||| | || | ||||| | | || ||| || |||| || || ||| Sbjct 15304896 TACTTCTCATCTGGTTTAAGCCTGTTCCAGTGAGGGAAATCATTTGATAAGTCAACCTCT 15304955 Query 34086 TCCACT 34091 |||||| Sbjct 15304956 TCCACT 15304961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629748571991040