Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq61 533 2e-146 seq80 370 1e-97 seq76 280 2e-70 seq94 230 3e-55 seq11 176 6e-39 seq47 154 2e-32 seq51 143 4e-29 seq1060 136 5e-27 seq387 134 2e-26 seq223 129 8e-25 seq202 120 4e-22 seq793 116 5e-21 seq44 114 2e-20 seq86 107 3e-18 seq55 96.9 5e-15 seq8 84.2 3e-11 >seq61 Length=17507673 Score = 533 bits (590), Expect = 2e-146 Identities = 554/724 (77%), Gaps = 3/724 (0%) Strand=Plus/Plus Query 9227 TTATTTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATC 9286 || ||| ||||||| | |||| || | |||||||||| |||||||||||||| ||| Sbjct 8864970 TTTTTTTTTATTAGCTTCTTCTAATAAACACAACAGATGCAGGAACAGATTGATGACATC 8865029 Query 9287 CAAGTAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGA 9346 |||||||| |||| | || | | ||| |||||||| || ||| |||| || ||||| Sbjct 8865030 CAAGTAGAGGCTGATGGCTGCCAGTATATACTCTTCAGGTGACAGCCTATGCATCAGTGA 8865089 Query 9347 GTGCGTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGACAGGACCAG 9406 ||| ||||||||||| ||||| |||||||| | ||||| || ||||| | ||||| Sbjct 8865090 GTGGGTGTCATAGATGATGAAGCCGCAGAAAAGCAGGGCTCCCCCAGCAGCAAAGACCAA 8865149 Query 9407 CTCCACTGTTTCACTTTGCACAAATATCCTCAAAAGTCCTGACAAAATTAAAATCCACAA 9466 ||||| ||| || || | | |||| ||| || | ||||||||| ||||||||||| Sbjct 8865150 CTCCAGTGTCTCGCTATAGAAGAATAACCTTAAGAATCCTGACAAGCACAAAATCCACAA 8865209 Query 9467 AGTAACAAACAATCCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGC 9526 | ||||| |||||||||| ||| || |||||| ||||||| |||||||| ||||| Sbjct 8865210 AACCGTAAACAGCCCTGCTCCAAATTTGCTAAAATCTTTCTTTGACTGTAGAGTGTATGC 8865269 Query 9527 AGTCAGAGCAAGAAACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATC 9586 ||||| ||||||| |||||||| |||| | |||||||| | ||| | || ||||| Sbjct 8865270 AGTCAAGCCAAGAAATACTGCAGTTGTCAATGTAAAAGCTTGTAGAACAATATAGACATC 8865329 Query 9587 ATAGAAAGTAACAACAGAGGCCAGCGTTAGAGATTCCGACAGTGTAAATCCACAAAGCAG 9646 |||||||||||||||| ||||| || |||| |||| | |||||||||||| ||||||| Sbjct 8865330 ATAGAAAGTAACAACAATGGCCACAGTCAGAGCTTCCAATAGTGTAAATCCAAAAAGCAG 8865389 Query 9647 GTATAAATTCAGGGGATGTTTATGTCTGTGTAAAGTCAATGCGAAAATCAAGCCTATAGA 9706 ||||||||| |||||||| |||||||||| | |||||||||||||||| || | ||| Sbjct 8865390 GTATAAATTAAGGGGATGCTTATGTCTGTTCAGTGTCAATGCGAAAATCATACCCAAAGA 8865449 Query 9707 TACGAACATTGATGCCAATATTAGAACAGGACTCCCTTGTATAATTTTCCGCATGCAGTC 9766 | | | | |||| || ||| |||||||| | || | || | |||| || | || Sbjct 8865450 TCCAAGGGCAAACACCAAAATGAGAGCAGGACTCTCATGCACAAATGTCCGTATAGACTC 8865509 Query 9767 AAAGTATAAAAATACTGCAGTTGTTGCCGTTGTTAAAAGAAATTGTAGACAAAGGATACC 9826 |||||||||||| || | | ||| | || || || |||| ||| ||| ||| | | | Sbjct 8865510 AAAGTATAAAAACACGGAACATGTCACTGTAGTCAAGAGAACTTGCAGAGAAAAGGTGCT 8865569 Query 9827 GTAGACTTTTCTTAGAAATGCCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCC 9886 || || ||||||||||| |||||||| |||||||| ||||| || ||||| ||||||| Sbjct 8865570 ATAAACCTTTCTTAGAAAAGCCATTCGGATGTGCACGCTGGCCGAGGCCACGCAGCTGCC 8865629 Query 9887 ATAGTTGAAGTCGTCCTCGATGGAGGAGCACGCGT--AGAGGCTC-GGCATGGCCATGGC 9943 |||||||||||| |||||||| || ||| | | || ||||| || | |||||||||| Sbjct 8865630 ATAGTTGAAGTCATCCTCGATCGACGAGGATGGGTAGAGAGGGTCTGAGCTGGCCATGGC 8865689 Query 9944 GGCG 9947 |||| Sbjct 8865690 GGCG 8865693 >seq80 Length=14032783 Score = 370 bits (410), Expect = 1e-97 Identities = 398/523 (76%), Gaps = 4/523 (1%) Strand=Plus/Minus Query 9429 AATATCCTCAAAAGTCCTGACAAAATTAAAATCCACAAAGTAACAAACAATCCTGCTCCA 9488 |||| || || | ||||| ||| |||||||||||| ||| | ||||||||| Sbjct 10811028 AATAACCCTAAGAATCCTGGCAAGCACAAAATCCACAAAACTGTAAAGAGCCCTGCTCCA 10810969 Query 9489 AGTTTACTGAAA-TCTCTCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGAAACACTGC 9547 | ||| | ||| ||| |||||||||||||||| |||||||||| ||||||| ||||| Sbjct 10810968 AATTTGATAAAAATCTTTCTTTGATTGTAGAGTGTATGCAGTCAAGCCAAGAAATACTGC 10810909 Query 9548 AGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAACAACAGAGGC 9607 ||| |||| || |||||||| | ||| | || ||||||||||||| ||||||| ||| Sbjct 10810908 AGTTGTCAATATAAAAGCTTGTAGAACAATATATACATCATAGAAAGGAACAACAATGGC 10810849 Query 9608 CAGCGTTAGAGATTCCGACAGTGTAAATCCACAAAGCAGGTATAAATTCAGGGGATGTTT 9667 || || |||| |||| | |||||||||||| |||||||||||||||| |||||||| || Sbjct 10810848 CACAGTCAGAGCTTCCAATAGTGTAAATCCAAAAAGCAGGTATAAATTAAGGGGATGCTT 10810789 Query 9668 ATGTCTGTGTAAAGTCAATGCGAAAATCAAGCCTATAGATACGAACATTGATGCCAATAT 9727 |||||||| | ||||||| |||||||| || | |||| | | | |||| || Sbjct 10810788 ATGTCTGTTCAGTGTCAATGTGAAAATCATACCCAAAGATCCAAGGGCAAACACCAAAAT 10810729 Query 9728 TAGAACAGGACTCCCTTGTATAATTTTCCGCATGCAGTCAAAGTATAAAAATACTGCAGT 9787 ||| |||| ||| | | | || | |||| || | |||||||||||||| || | | Sbjct 10810728 GAGAGCAGGGCTCTCATCCACAAATGTCCGTATAGACTCAAAGTATAAAAACACGGAACA 10810669 Query 9788 TGTTGCCGTTGTTAAAAGAAATTGTAGACAAAGGATACCGTAGACTTTTCTTAGAAATGC 9847 ||| | || || || |||| ||| ||| ||| ||| | || || ||||||||||| || Sbjct 10810668 TGTCACTGTAGTCAAGAGAACTTGCAGAGAAAAGATGCTATAAACCTTTCTTAGAAAAGC 10810609 Query 9848 CATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGAT 9907 |||||| |||||||| ||||| || ||||| ||||||||||||||||||| |||||||| Sbjct 10810608 CATTCGCATGTGCACGCTGGCCGAGGCCACGCAGCTGCCATAGTTGAAGTCATCCTCGAT 10810549 Query 9908 GGAGGAGCACGCGT--AGAGGCTC-GGCATGGCCATGGCGGCG 9947 || ||| | | || ||||| || | |||||||||||||| Sbjct 10810548 TGACGAGGATGGGTAGAGAGGGTCTGAGCTGGCCATGGCGGCG 10810506 >seq76 Length=15298453 Score = 280 bits (310), Expect = 2e-70 Identities = 360/493 (73%), Gaps = 10/493 (2%) Strand=Plus/Plus Query 9438 AAAAG--TCCTGACAAAATTAAAATCCACAAAGTAACAAACAATCCTGCTCCAAGTTTAC 9495 ||||| ||||||||| |||||||||||| ||||| |||||||||| ||| | Sbjct 1552748 AAAAGAATCCTGACAAGCAGAAAATCCACAAAACCCTAAACAGCCCTGCTCCAAATTTGC 1552807 Query 9496 TGAAATCTCTCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGAAACACTGCAGTAGTCA 9555 | ||| || ||||||||||||||||||||||| ||| ||||||| |||||||| |||| Sbjct 1552808 TAAAAACTTTCTTTGATTGTAGAGTATATGCATTCAATCCAAGAAATACTGCAGTTGTCA 1552867 Query 9556 GCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAACAACAGAGGCCAGCGTTA 9615 || |||||| | ||| | || | |||||||||||||||||| ||| | || | Sbjct 1552868 ATATTAAAGCTAATAGAACAATATATATGTCATAGAAAGTAACAACAATGGCTACAGTCA 1552927 Query 9616 GAGATTCCGACAGTGTAAATCCACAAAGCAGGTATAAATTCAGGGGATGTTTATGTCTGT 9675 ||| |||| | | |||||||||| |||||| |||||| || |||||||| |||||||||| Sbjct 1552928 GAGCTTCCAATAATGTAAATCCAAAAAGCAAGTATAAGTTAAGGGGATGCTTATGTCTGT 1552987 Query 9676 GTAAAGTCAATGCGAAAATCAAGCCTATAGATACGAACATTGATGCCAATATTAGAACAG 9735 | ||||||| ||||||| || | |||| | | | ||| || || ||| Sbjct 1552988 TCAGTGTCAATGGGAAAATCCTACCCAAAGATCCAAGGGCAAACACCAGAATGAGGGCAG 1553047 Query 9736 GACTCCCTTGTATAATTTTCCGCATGCAGTCAAAGTATAAAAATACTGCAG-----TTGT 9790 ||| | || | || | ||| ||| | |||||||||||||| | || ||| Sbjct 1553048 CGCTCTCATGCACAAATGTCCATATGGACTCAAAGTATAAAAAAAAAAAAGGGAGCATGT 1553107 Query 9791 TGCCGTTGTTAAAAGAAATTGTAGACAAAGGATACCGTAGACTTTTCTTAGAAATGCCAT 9850 | | || || || |||| ||| ||| || ||| | || ||||||||| |||| || | Sbjct 1553108 TACTGTGGTCAAGAGAACTTGCAGAGAACAGATGC--TATACTTTTCTT-GAAAAGCTCT 1553164 Query 9851 TCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGATGGA 9910 ||| |||||||| ||||| | ||||| ||||||| ||||||||||| |||||||| | Sbjct 1553165 TCGGATGTGCACGCTGGCCAAGGCCACACAGCTGCCGTAGTTGAAGTCATCCTCGATCAA 1553224 Query 9911 GGAGCACGCGTAG 9923 ||| | | |||| Sbjct 1553225 CGAGGATGGGTAG 1553237 Score = 89.7 bits (98), Expect = 7e-13 Identities = 135/189 (71%), Gaps = 6/189 (3%) Strand=Plus/Plus Query 9229 ATTTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATCCA 9288 |||| |||||| | | || | | || |||||||||| | |||||||||||| | ||| Sbjct 1551624 ATTTTGTATTAGCTTTTCCCGATAAATGCAACAGATGCAGGTACAGATTGATGACACCCA 1551683 Query 9289 AGTAGAAATTGATAGAGGCTAACACATAGTC-TTCAGGCGAGAGCTTATGTATTAGTGAG 9347 ||| || | || | || | | ||| || |||||| || ||| | || | | | || Sbjct 1551684 AGTCGAGGCTCATGGCTGCCAGTATATACTCGTTCAGGTGACAGCCTTTGAAGCAATAAG 1551743 Query 9348 TGCGTGTCATAGATAATGAATCCGCAGAATACAAGGGC--CCCAAAAGCAGACAGGACCA 9405 || ||||||||||| ||||| || ||||| | ||||| ||| ||||| | ||||| Sbjct 1551744 TGAGTGTCATAGATGATGAAGCCACAGAAAAGCAGGGCTTCCC---AGCAGCAAAGACCA 1551800 Query 9406 GCTCCACTG 9414 |||||||| Sbjct 1551801 ACTCCACTG 1551809 >seq94 Length=13213440 Score = 230 bits (254), Expect = 3e-55 Identities = 417/603 (69%), Gaps = 18/603 (3%) Strand=Plus/Plus Query 36143 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 36202 ||||| |||| || || || || ||||||| || || ||||| ||| | | ||| Sbjct 4997813 TGTTTGAACAGCAGGTGAGCAAAGTCACAGTGTAAGCCTTCATCTCTGCTAGTAAGTTCA 4997872 Query 36203 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 36262 ||||||| ||||| || |||| || | | || || ||||| ||||| || ||||| Sbjct 4997873 CTGGAAAATGTGAGGCCAGGCACCAGTTCTCATTTCTTGAGCCAGAATATTGATGCAAAA 4997932 Query 36263 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCG 36322 || | || |||| ||||||| ||||| |||||||| | | |||||||| || | Sbjct 4997933 GAACTGGAGAAGA---TTCCTTCCACTGCTGCAAAGGCTACGACACTCTCTCCGTA---G 4997986 Query 36323 GCACTGTCAT-GTATCCA---CTTTTGA--GCCCAATCGGCCTTCTTTTTTACACAAGGC 36376 | | | || | || ||| | | ||||| || || ||| |||||||| ||| Sbjct 4997987 GTAATTTCTTTGTTCCCAGCCCAACGCAAGGCCCAGTCTGCTGCCTTCTTTACACAGGGC 4998046 Query 36377 ATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCA 36436 ||||| || || ||||| | |||| | | ||| ||| |||||||| ||| ||| Sbjct 4998047 ATTGTTTCAATGGCATTGATGAGAAATTCCCATTCCTTAGGATCTTTAA----TGTGTCA 4998102 Query 36437 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAA 36496 || | |||||||||||||| ||||| |||||||| ||||| ||||| || || |||||| Sbjct 4998103 ATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAA 4998162 Query 36497 CATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACT 36556 || | || || |||||||| |||||| | ||| || || | | |||||||||||| Sbjct 4998163 CAGCGGGCTTCTGTAATCTGGACTTCTTGGCTAAACCGCTCCACCAGGTTTTCATTCACT 4998222 Query 36557 ATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGT 36616 | || ||||| || ||||| || |||| ||||| |||||| || | || | | Sbjct 4998223 GTGCCATCACTTGCAGCAAAGAAGGCCAGAACATGGGATATAAAGTAACTCTCCTCAGAC 4998282 Query 36617 GTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCA-CTTCTTCCACTGTCCAAAA 36675 | || | ||| | | || ||||| || | ||| | || ||| | | ||||| Sbjct 4998283 TTAAGGGCTTCCCAGTGCTAAATGTCTTTGGAAAGATCAATCTCCTTGGTGT-TTCAAAA 4998341 Query 36676 TGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAAC 36735 || |||| || || ||| |||| | ||| |||||||| |||| || ||||||| || Sbjct 4998342 GGAAGCCTGAGCTTTCTTAGACATCTGCCAAATGTCATGGTATTCAACAGGAAAAACGAC 4998401 Query 36736 AAA 36738 ||| Sbjct 4998402 AAA 4998404 >seq11 Length=32252908 Score = 176 bits (194), Expect = 6e-39 Identities = 289/425 (68%), Gaps = 35/425 (8%) Strand=Plus/Plus Query 36143 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 36202 ||||| |||| | || || || || ||||||| |||||| ||||||| || | ||| Sbjct 31685059 TGTTTGAACACTAGGCAAGCAAAGTCACAGTGTACACCCTCAACTCTACTCATAAGTTCA 31685118 Query 36203 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 36262 |||||||| ||| | || ||| |||| || | || || ||||| ||||| | | |||| Sbjct 31685119 TTGGAAAATGTGGGGCCAGGCCTTAGTCCTCATTTCTTGAGCCAGAATATTGGCACAAA- 31685177 Query 36263 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCG 36322 || ||||| |||| |||||||| ||||| || ||||| | || | | ||||| | | Sbjct 31685178 GAAGCAGAACAGAAGATTCCTTCCACTGCTGCCAAGGCTACAACACGTTTTCCATCAGCA 31685237 Query 36323 GCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTC 36382 || ||||| |||||||| ||||| | Sbjct 31685238 GC----------------------------------TTCTTCTTTACACAGGGCATCATT 31685263 Query 36383 TCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAA 36442 || || ||||| |||||| | | ||| ||| |||||||| || || ||||| | Sbjct 31685264 TCAATGGCATTGAAGAGAAATTCCCATTCCTTAGGATCTTTAATGTAAGTGTCAATAAGG 31685323 Query 36443 AGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTA 36502 |||||||||||||| ||||| |||||||| | ||| ||||| || || ||||||| | Sbjct 31685324 AGACTATACATTTCAGAATGTATGTTTTCCAAGGCAATTTGGAAGCCACAGAAACAGTGA 31685383 Query 36503 GCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCG 36562 || || |||||| |||||| | ||| ||||||| | ||||| |||||||| || Sbjct 31685384 GCTTCTGTAATCCAGACTTCTTGGCTAAACCGTTCTGTCAGGTTTTCGTTCACTATGCCA 31685443 Query 36563 TCACT 36567 ||||| Sbjct 31685444 TCACT 31685448 >seq47 Length=20092007 Score = 154 bits (170), Expect = 2e-32 Identities = 151/195 (77%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 9227 TTATTTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATC 9286 |||||| ||||||| | |||| || | | |||||||||| |||||||||||||| ||| Sbjct 11093893 TTATTTTTTATTAGCTGCTTCTAATAAACGCAACAGATGCAGGAACAGATTGATGACATC 11093952 Query 9287 CAAGTAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGA 9346 |||||||| |||| | || | | ||| |||||||| || ||| |||| || ||||| Sbjct 11093953 CAAGTAGAGGCTGATGGCTGCCAGTATATACTCTTCAGGTGACAGCCTATGCATCAGTGA 11094012 Query 9347 GTGCGTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGACAGGACCAG 9406 ||| ||||||||||| ||||| |||||||| | ||||| || ||||| | ||||| Sbjct 11094013 GTGGGTGTCATAGATGATGAAGCCGCAGAAAAGCAGGGCTCCCCCAGCAGCAAAGACCAA 11094072 Query 9407 CTCCACTGTTTCACT 9421 ||||| ||| || || Sbjct 11094073 CTCCAGTGTCTCGCT 11094087 Score = 129 bits (142), Expect = 8e-25 Identities = 100/119 (84%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 9480 CCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGA 9539 |||||||||| ||| || |||||| ||||||| ||||||||||||||||||| ||||| Sbjct 11097960 CCTGCTCCAAATTTGCTAAAATCTTTCTTTGACTGTAGAGTATATGCAGTCAAGCCAAGA 11098019 Query 9540 AACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAAC 9598 || |||||||| |||| || |||||||| | ||| | || ||||||||||||||||| Sbjct 11098020 AATACTGCAGTTGTCAATATAAAAGCTTGTAGAACAATATAGACATCATAGAAAGTAAC 11098078 Score = 96.9 bits (106), Expect = 5e-15 Identities = 85/104 (82%), Gaps = 3/104 (3%) Strand=Plus/Plus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 ||||||| |||||||| ||||| || ||||| ||||||||||||||||||| ||||||| Sbjct 11112230 CCATTCGGATGTGCACGCTGGCCGAGGCCACGCAGCTGCCATAGTTGAAGTCATCCTCGA 11112289 Query 9907 TGGAGGAGCACGCGT--AGAGGCTC-GGCATGGCCATGGCGGCG 9947 | || ||| | | || ||||| || | |||||||||||||| Sbjct 11112290 TCGACGAGGATGGGTAGAGAGGGTCTGAGCTGGCCATGGCGGCG 11112333 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 9632 AAATCCACAAAGCAGGTATAAATTCAGGGGATGTTTATGTCTGTGTAAAGTCAATGCGAA 9691 ||||||| |||||||||||||||| |||||||| |||||||||| | ||||||||| | Sbjct 11107824 AAATCCAAAAAGCAGGTATAAATTAAGGGGATGCTTATGTCTGTTCAGTGTCAATGCGCA 11107883 Query 9692 AATCAAGCCTATAGAT 9707 ||||| || | |||| Sbjct 11107884 AATCATACCCAAAGAT 11107899 >seq51 Length=18525102 Score = 143 bits (158), Expect = 4e-29 Identities = 381/582 (65%), Gaps = 30/582 (5%) Strand=Plus/Plus Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217 || || || |||||||||| |||||| ||||| || | | ||| ||||||| ||||| Sbjct 17120055 CAAGCAAAGTCGCAGTGTAAACCCTCATCTCTGCTGACAAGTTCAGTGGAAAATGTGAGG 17120114 Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277 || ||||||| | || || ||||| ||| | ||||| || || | || || Sbjct 17120115 CCAGGCATTAATCTTTATTTCTTGAGCCAGGGTATCAATGCAAAGGAAGCAAAGAATAAG 17120174 Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA-CCGGCACTGTCATGTAT 36336 |||||||| ||| | ||||| || | || |||||||| ||| || ||| | | | Sbjct 17120175 ATTCCTTCCACTACTGCAAATGCTACAACACTCTCTCCTTAATCCAACAC----AAGGA- 17120229 Query 36337 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAA 36396 ||| || |||||||| || ||| | |||| | || || ||||| || Sbjct 17120230 ------------CCAGTCTGCCTTCTTCTTCACAAAGGGCACCATTTCAATGGCATTGAA 17120277 Query 36397 GAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTC 36456 || | | | ||| ||| |||||||| |||||||| | ||||||| ||||| Sbjct 17120278 GACAAATTCCCATTCCTTAGGATCTTTAA-----GTATCAATAATGAGACTATCTATTTC 17120332 Query 36457 CGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTG 36516 ||| | |||||||| ||||||||||| || | |||||||| || || | | || Sbjct 17120333 AGAACGGATGTTTTCCATGGCCATTTGGAAGTCATAGAAACAGTGGGCTTCTG---TGTG 17120389 Query 36517 TACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAA 36576 |||||| | ||| | ||| | | ||||| ||| || | | | ||||||| Sbjct 17120390 GACTTCTTGGCTAAACCACTCTATGAGGT----ATTCATTATGCCATTATTTTCTGCAAA 17120445 Query 36577 AAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATT 36636 || ||| ||||| | |||||||| | || | | | || | ||| | | Sbjct 17120446 GAAGTCCAGAACATGGGATGTAAAATATCTCTCCTCAGACTTCAGGGCTTCCCAGTGTTG 17120505 Query 36637 GATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 36696 || | || || | ||||| || || | ||||| || || ||||| || | ||||| Sbjct 17120506 AATGCCCTTGGAAAGATCCATCTCCTCAGCAGTCCACAAGGAAGCCTCAGCTTGCTTATA 17120565 Query 36697 CATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 | | ||| ||||||| ||||| | | ||||| || ||||| Sbjct 17120566 TAGCTGCCAAATGTCATAATATTCACTAGGAAAGATGACAAA 17120607 >seq1060 Length=13830 Score = 136 bits (150), Expect = 5e-27 Identities = 166/224 (74%), Gaps = 7/224 (3%) Strand=Plus/Plus Query 9434 CCTCAAAAGTCCTGACAAAATTAAAATCCACAAAGTAACAAACAATCCTGCTCCAAGTTT 9493 ||| || | |||||| ||| ||||| |||||| ||||| |||||||||| ||| Sbjct 12086 CCTTAAGAATCCTGATAAACACAAAATTCACAAAACTGTAAACAGTCCTGCTCCAGATTT 12145 Query 9494 ACTGAAATCTC--TCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGAAACACTGCAGTA 9551 || |||||| ||||||||||||||||||||||||| | |||||||| ||| |||| Sbjct 12146 GCTAAAATCTTAATCTTTGATTGTAGAGTATATGCAGTAAAGGCAAGAAATACTCCAGTT 12205 Query 9552 GTCAGCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAACAACAGAGGCCAGC 9611 |||| ||||||||||| | || | | |||||||||||| ||||| ||||| Sbjct 12206 GTCAATATGAAAGCTTGTAGAATAGCTT--CCATCATAGAAAGGAACAA---TGGCCACA 12260 Query 9612 GTTAGAGATTCCGACAGTGTAAATCCACAAAGCAGGTATAAATT 9655 | ||| |||| ||| |||||||| |||| |||| || || Sbjct 12261 GGCTGAGCTTCCAACACCATAAATCCAAAAAGTCGGTACAAGTT 12304 >seq387 Length=1631406 Score = 134 bits (148), Expect = 2e-26 Identities = 333/507 (66%), Gaps = 65/507 (13%) Strand=Plus/Plus Query 9231 TTCTTATTAGATACTTCCAAA-AGCTGTAACAGATGCAAGAACAGATTGATGATATCCAA 9289 || ||||||| |||||||| | || |||||||||| ||||||| |||| | |||||| Sbjct 1399504 TTATTATTAGTGACTTCCAATGAACTC-AACAGATGCAGGAACAGACTGATAACATCCAA 1399562 Query 9290 GTAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGAGTG 9349 |||| |||| |||| || | |||||| || || || ||||| Sbjct 1399563 TTAGAGGCTGAT---GGCTGCCATACTCCCTTCAG-----------TGAATCAGGGAGTG 1399608 Query 9350 CGTGTCATAGATAATGAATCC--GCAGAATACAAGGG---CCCCAAAAGCAGACAGGACC 9404 ||||||||||| ||| | || |||||| | |||| ||||| ||| | |||| Sbjct 1399609 GGTGTCATAGATGATGCAACCCTGCAGAAAAGCAGGGATTCCCCAGAAGTGAA---GACC 1399665 Query 9405 AGCTCCACTGTTTCACTTTGCACAAATATCCTCAAAAGTCCTGACAAAATTAAAATCCAC 9464 | ||||||||| ||||| | ||||| ||| || | ||| || || ||||||||| Sbjct 1399666 AACTCCACTGTCTCACTGCAGAAAAATAACCTTAAGAATCCAGATAAGCACAAAATCCAC 1399725 Query 9465 AAAGTAACAAACAATCCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATAT 9524 || ||| | |||||||||| ||| || | | || ||||| ||||| |||| Sbjct 1399726 AACACTGGAAATAGGCCTGCTCCAACTTTGCTAACGTATC----TGATTTTAGAGCATAT 1399781 Query 9525 GCAGTCAGAGCAAGAAACACTGCAGTAGTCAGCATGAAAGC--TTGCATAACGAC----- 9577 | || | ||||||| ||| | | || | |||||||| | | |||| || Sbjct 1399782 G----CAAACCAAGAAATGCTGTAATTGTTAATATGAAAGCTATAGAATAAAAACAGAAG 1399837 Query 9578 -----------------ATGCACATCATAGAAAGTAACAACAGAGGCCAGCGTTAGAGAT 9620 || ||| ||||| ||||||||||| || |||| | Sbjct 1399838 GAAAGCTATGAAATAATATATACACCATAGGAAGTAACAACA---------GTCAGAGCT 1399888 Query 9621 TCCGACAGTGTAAATCCACAAAGCAGGTATAAATTCAGGGGATGTTTATGTCTGTGTAAA 9680 ||| | || |||| || |||||||||| || || ||||||||||||||||||| | Sbjct 1399889 TCCAATAGCATAAACCCCAAAAGCAGGTACAATTTAAGGGGATGTTTATGTCTGTTCCAT 1399948 Query 9681 GTCAATGCGAAAATCAAGCCTATAGAT 9707 ||||||| ||||||| || | |||| Sbjct 1399949 GTCAATGTAAAAATCATACCCAAAGAT 1399975 >seq223 Length=5023716 Score = 129 bits (142), Expect = 8e-25 Identities = 101/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239 |||| ||||| ||||| | ||| |||||||||||||| || ||||| || || || || | Sbjct 3965826 CCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGTCCTCGTTTCT 3965767 Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299 | ||||| ||||| |||||||| || ||||||||||| |||||||| ||||| ||||||| Sbjct 3965766 TGAGCCAGAATATTGACGCAAAAGAACCAGAAAAGAAGATTCCTTCAACTGCTGCAAAGG 3965707 Query 36300 C 36300 | Sbjct 3965706 C 3965706 Score = 111 bits (122), Expect = 2e-19 Identities = 88/106 (83%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 36418 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 36477 |||||||| ||| |||||||| | |||||||||||||| ||||| |||||||| ||||| Sbjct 3962640 ATCTTTAATATAAGTATCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 3962581 Query 36478 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCT 36523 ||||| || || |||||||| | ||| || |||| ||| |||||| Sbjct 3962580 AATTTGGAAGCCATAGAAACAGCGAGCTTCTGTAACCTGGACTTCT 3962535 >seq202 Length=5697000 Score = 120 bits (132), Expect = 4e-22 Identities = 98/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 36182 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 36241 || ||||| || || | ||| |||||||| |||||||| ||||| ||||| | ||| || Sbjct 3890747 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCAGGCATAAGGCCTCTCTTCTTC 3890688 Query 36242 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 36300 ||||| || || | ||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct 3890687 AGCCAGAAAATCGCAGCAAAAGATCCAGAGAAGAAAATTCCTTCTACAGCCGCAAAGGC 3890629 >seq793 Length=23236 Score = 116 bits (128), Expect = 5e-21 Identities = 184/262 (70%), Gaps = 9/262 (3%) Strand=Plus/Minus Query 9231 TTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATCCAAG 9290 || ||||||| | |||||| | || || ||||||| ||||||||| |||| ||||||| Sbjct 7909 TTTTTATTAGCTGTTTCCAATAAATGCAATAGATGCAGGAACAGATTTATGACATCCAAG 7850 Query 9291 TAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGC-------TTATGTATTAG 9343 |||| |||| | | | | ||| || |||| || ||| | ||| || || Sbjct 7849 TAGAGCCTGATGGCCACCAGTATATATTCCTCAGATGACAGCCTATGCATCATGCATCAG 7790 Query 9344 TGAGTGCGTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGACAGGAC 9403 |||||| |||||| ||| |||| || ||||| | ||||| || ||||| | ||| Sbjct 7789 TGAGTGGGTGTCACAGACGGTGAAGCCACAGAAAAGCAGGGCTCCCCCAGCAGCAAAGAC 7730 Query 9404 CAGCTCCACTGTTTCACT-TTGCACAAATATCCTCAAAAGTCCTGACAAAATTAAAATCC 9462 || ||||||||| ||||| | ||| |||| ||| || | |||||| || ||||||| Sbjct 7729 CAACTCCACTGTCTCACTATAGCA-GAATAACCTTAAGAATCCTGATAAGCAAAAAATCC 7671 Query 9463 ACAAAGTAACAAACAATCCTGC 9484 | | | |||||| ||||| Sbjct 7670 ATAGAACTGCAAACAGCCCTGC 7649 >seq44 Length=20396770 Score = 114 bits (126), Expect = 2e-20 Identities = 108/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 65180 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 65239 ||| |||||||| || ||||| |||| |||||||| || || |||||||| | ||| | Sbjct 12601427 TACCTGAAATTCCCCTGACAAGACTCGGCGAGTGTAGATGTTGCTGGTATAAGCTTCAAT 12601486 Query 65240 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 65299 |||||||||||| || | || ||||||||||| ||||| ||||| || || | | ||| Sbjct 12601487 AGACTCATTATTCCCAAGTATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAA 12601546 Query 65300 ACTATTTCTAAGACCGTA 65317 ||| ||||| | ||| || Sbjct 12601547 ACTGTTTCTTACACCATA 12601564 Score = 109 bits (120), Expect = 7e-19 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 66056 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCT 66115 || |||||||||||| ||||| || ||||||||||| || | ||||| ||| |||| | Sbjct 12616085 CTCCACTCGTTTCATGAAGAGGTCTGGAATCCAAAGGGCAAAAAATAGATCCCTGGCACG 12616144 Query 66116 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCA 66175 ||||| || ||||| || ||||| || | ||| |||||| | | || || ||||||| Sbjct 12616145 CTGTTCTTCCTTTCCCGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCA 12616204 Query 66176 CGGTTCCAAGTATATGGCCATAACTCCAGGCCG 66208 || |||||||| || || | ||||||| || Sbjct 12616205 TGGCTCCAAGTAAATAGCAAATGCTCCAGGTCG 12616237 Score = 105 bits (116), Expect = 9e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 64906 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 64965 |||| ||||| ||||||||||| || |||||| ||| | || || || || ||||| | Sbjct 12594163 TCCAGCCGTAGAAATGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 12594222 Query 64966 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 65025 ||| ||| || |||||||| ||||| || || || || || ||||| || | | || | Sbjct 12594223 TCAGAGACTGGCTTTGATCTATGAAAGCCCCTCTCTCAGCTGCCATCTTGAGTACGGTTT 12594282 Query 65026 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 65076 |||| | ||||||||| | || ||||||| |||| | || || |||| Sbjct 12594283 TTTGAGAAATTTCCCACACCGTCTTATAAAGCTGCTTCAAGTCATCGGGAA 12594333 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 65412 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 65471 || ||| |||| || ||||| || || || || ||| ||||||||||| || || || Sbjct 12613386 GAGCCTTCATAGGTTTCGTAAGGGCCAAGCTCCTTAGCCAGTTCACAACTGGCTTCCAAA 12613445 Query 65472 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 65531 || || |||||||||||||| || || | ||||| || || || || | || ||| Sbjct 12613446 GCTCCATAATAAATGGTTTCAAATATTTGTTTATTCAGTAACTGGGCCTCTGGACTCTCA 12613505 Query 65532 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGT 65591 || ||||| | | || || || || ||||||| ||||| || ||||| || || || Sbjct 12613506 AAAGGATATCTCATCAGGATGAAAGCATCTGCTAGACCTTGGACCCCAATTCCAATGGGA 12613565 Query 65592 CTATGTCTCTTATTAGA 65608 | ||| | ||||| || Sbjct 12613566 CGATGGCGTTTATTTGA 12613582 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 66450 CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGT 66509 ||| | || || ||||| || | |||||||||||| || |||||||| || ||||| || Sbjct 12623874 CGATTGGTCCCAGCATTGAAGAGGGTAGGAGAAGCATGAGTAAACCACTTCTCAGACAGA 12623933 Query 66510 AGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGC 66569 || ||||| || |||||||| | || ||||| || ||||| || || | || | | Sbjct 12623934 AGGTTGTATGTTTCAATAGCAGCATCAATATCTTCTTTGTGAATCCCGACAGATACCCTC 12623993 Query 66570 ATTAACATGTGCTGAGGTCTTTCA 66593 || | ||| ||||| ||||||||| Sbjct 12623994 ATCAGCATATGCTGTGGTCTTTCA 12624017 >seq86 Length=13901021 Score = 107 bits (118), Expect = 3e-18 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 9765 TCAAAGTATAAAAATACTGCAGTTGTTGCCGTTGTTAAAAGAAATTGTAGACAAAGGATA 9824 |||||||||||||| || | | || | | || || |||| ||| ||| ||| ||| Sbjct 2683973 TCAAAGTATAAAAACACAGAACAAGTCACTGCAGTCAAGAGAACTTGCAGAGAAAAGATG 2684032 Query 9825 CCGTAGACTTTTCTTAGAAATGCCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTG 9884 | || |||||||||||||| | ||||| |||||||| ||||| | ||| | ||||| Sbjct 2684033 CTATAAACTTTTCTTAGAAAAGTCATTCAGATGTGCACGCTGGCCAAGGCCGCACAGCTG 2684092 Query 9885 CCATAGTTGAAGTCGTCCTCGA 9906 |||||||||||||| ||||||| Sbjct 2684093 CCATAGTTGAAGTCATCCTCGA 2684114 >seq55 Length=17211483 Score = 96.9 bits (106), Expect = 5e-15 Identities = 111/148 (75%), Gaps = 1/148 (1%) Strand=Plus/Plus Query 9229 ATTTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATCCA 9288 |||| ||||||| | ||| ||| | || ||||||||| |||||| ||||||| ||||| Sbjct 6572795 ATTTTTTATTAGCTGCTTTCAATAAATGCAACAGATGCTGGAACAGCTTGATGACATCCA 6572854 Query 9289 AGTAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGAGT 9348 |||||| |||| | || | ||||| |||||| || ||| ||| || |||||| Sbjct 6572855 AGTAGAGGCTGATGGTTGCCAGTACATACTCTTCA-ATGACAGCCTATACATCAGTGAGC 6572913 Query 9349 GCGTGTCATAGATAATGAATCCGCAGAA 9376 ||||||||||| ||| | | |||||| Sbjct 6572914 AGGTGTCATAGATGATGGAGCTGCAGAA 6572941 >seq8 Length=38200284 Score = 84.2 bits (92), Expect = 3e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 36542 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 36601 ||||||||||| || ||||| ||||||||||||||||| || || | || |||||| Sbjct 15304836 AAATTTTCATTTACAATTCCATCACTGGCTGCAAAAAAGGCTAAGATGTGAGAGATAAAA 15304895 Query 36602 TATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCT 36661 || || || | |||| | || | ||||| | | || ||| || |||| || || ||| Sbjct 15304896 TACTTCTCATCTGGTTTAAGCCTGTTCCAGTGAGGGAAATCATTTGATAAGTCAACCTCT 15304955 Query 36662 TCCACT 36667 |||||| Sbjct 15304956 TCCACT 15304961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658100664261120