Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq145 84.2 2e-11 >seq145 Length=8547294 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | ||||||||||| | || || || | |||| |||| | ||| | Sbjct 6751054 CAAGATGCAGATTTTTGTAAAAACCCTCACGGGGAAGACCATCATGCTCGAGGTTGAACC 6750995 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 ||||| || ||| | ||||| ||||| ||||| ||||| || ||||| || Sbjct 6750994 CTCGGACACAATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGA 6750935 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 ||| || |||||||| | | || ||||| || ||||||| | | | | ||||| Sbjct 6750934 TCAGCAGAGACTCATCTTTGCTGGAAAACAGCTGGAAGATGGGCGGACCCTGTCTGACTA 6750875 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| || || || || ||| | || || || |||||||| | || || Sbjct 6750874 CAACATCCACAAGGAGTCCACTCTTCACCTTGTATTGAGACTTCGTGGTGG 6750824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478609938600960