Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq202 87.8 3e-12 >seq202 Length=5697000 Score = 87.8 bits (96), Expect = 3e-12 Identities = 102/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 || || ||| ||||||||||| | || || || || || |||||||| || | || || Sbjct 3890614 GGGGAAAGGTTGGTAGCCTTTGCGGCTGTAGAAGGAATTTTCTTCTCTGGATCTTTTGCT 3890673 Query 42756 TCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814 | || |||||||| ||| ||| ||| | ||||| |||||||| || || || ||||| Sbjct 3890674 GCGATTTTCTGGCTGAAGAAGAGAGGCCT-TATGCCTGGACTCACTTTTTCCAATGAACT 3890732 Query 42815 CATCAGCAGGGACGA 42829 ||||||||| || || Sbjct 3890733 CATCAGCAGAGATGA 3890747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944235700423680