Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq316 100 3e-16 >seq316 Length=2809289 Score = 100 bits (110), Expect = 3e-16 Identities = 112/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 20249 TGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCC 20308 || || | ||| || || | |||| |||||||||||||| ||||| || |||| ||| Sbjct 1685923 TGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCAATGTTGAAAGGCACCCCCAGGCCC 1685982 Query 20309 ATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGA 20368 |||||||| |||||||| |||||||||||||| || ||||| | | || || || || Sbjct 1685983 ATGTCTCCTGACCTCTGGTACAGCTGACAGGAGAGTTCACCATTCACCACGTAGAACTGG 1686042 Query 20369 CATAACAAGTGACAGGGCGGAAGCGCCATC 20398 || | || ||||| || || |||||| Sbjct 1686043 CAAAGGGCATGGCAGGGTGGCAGGGCCATC 1686072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441324425541120