Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq21 84.2 3e-11 >seq21 Length=27434213 Score = 84.2 bits (92), Expect = 3e-11 Identities = 154/226 (68%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502 || || ||||| | || |||| || || || || ||||| || |||||||| | | Sbjct 23822059 CAGAGATTTGGGGTGCCCCTGGGCTATGGGGGACCCCATGCAGCCTTCTTTGCTGTCAGA 23822000 Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGT 158562 || || | | ||| ||| ||||| ||||| || || | | |||| | || Sbjct 23821999 GAAAACTTGGTGCGAATGATGCCTGGAAGAATGGTTGGGGTGACGAGAGATGCCAGTGGG 23821940 Query 158563 AATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCA 158622 || ||| || | | || || || || || || ||||| ||| | |||||||| || Sbjct 23821939 AAAGAAGTGTATCGCCTCGCTCTTCAAACCAGGGATCAGCACATCCGGAGAGACAAGGCC 23821880 Query 158623 ACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTG 158668 ||||| |||||||||||||| || || || |||| |||||| ||| Sbjct 23821879 ACCAGCAACATCTGCACAGCGCAGGCCCTTTTGGCAAATATGGCTG 23821834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587986749588480