Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq145 86.0 5e-12 >seq145 Length=8547294 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 || ||||| || ||||||||||| | ||||| || ||||| | ||| ||||| Sbjct 6751053 AAGATGCAGATTTTTGTAAAAACCCTCACGGGGAAGACCATCATGCTCGAGGTTGAACCC 6750994 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || || | | || ||||| || ||| ||||| || ||| | || ||| Sbjct 6750993 TCGGACACAATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGAT 6750934 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 || |||||||| |||||||| || ||||| |||||||| || || | || || Sbjct 6750933 CAGCAGAGACTCATCTTTGCTGGAAAACAGCTGGAAGATGGGCGGACCCTGTCTGACTAC 6750874 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||| || || || || ||||| ||| | ||||| ||| | || || || Sbjct 6750873 AACATCCACAAGGAGTCCACTCTTCACCTTGTATTGAGACTTCGTGGTGG 6750824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425359341243072