Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10]
8,768 sequences; 3,843,982,861 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq33 105 1e-17
seq179 102 2e-16
seq145 102 2e-16
seq71 100 6e-16
seq339 96.9 7e-15
seq257 96.9 7e-15
seq146 95.1 2e-14
seq79 95.1 2e-14
seq90 93.3 8e-14
seq324 91.5 3e-13
seq26 91.5 3e-13
seq376 89.7 1e-12
seq209 89.7 1e-12
seq44 89.7 1e-12
seq57 87.8 4e-12
seq3 87.8 4e-12
seq16 86.0 1e-11
seq254 84.2 4e-11
seq132 84.2 4e-11
seq82 84.2 4e-11
seq77 84.2 4e-11
>seq33
Length=21904142
Score = 105 bits (116), Expect = 1e-17
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
|||||| | ||| | ||||| | ||| | ||| | ||| || ||| || || |||||
Sbjct 10626731 ACCACCACGAAGTCTCAATACAAGATGAAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 10626790
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
| || || |||| |||| ||||| ||||||||||| | |||||| |||||||| ||
Sbjct 10626791 CAGGGTCCGCCCATCTTCCAGCTGTTTTCCAGCAAAGATGAGTCTCTGCTGATCAGGAGG 10626850
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|||||||| || || || || || || ||||| || | || || | ||| ||
Sbjct 10626851 AATTCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATTGTGTCCGAGGGTTCAAC 10626910
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| || || ||||| || || || | ||||| | || |||||||| ||
Sbjct 10626911 CTCGAGCGTGATGGTCTTCCCCGTGAGGGTTTTTACGAAAATCTGCATCTT 10626961
>seq179
Length=6907437
Score = 102 bits (112), Expect = 2e-16
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
|||||| | ||| | ||||| | || | ||| | ||| || ||| || || |||||
Sbjct 5669988 ACCACCACGAAGTCTCAATACAAGGTGAAGAGTGGACTCCTTCAGGATGTTGTAGTCAGA 5669929
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
| || || |||| |||| ||||| ||||||||||| | |||||| |||||||| ||
Sbjct 5669928 CAGGGTCCGCCCATCTTCCAGCTGTTTTCCAGCAAAGATGAGTCTCTGCTGATCAGGAGG 5669869
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|||||||| || || || || || || ||||| || | || || | ||| ||
Sbjct 5669868 AATTCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATTGTGTCCGAGGGTTCAAC 5669809
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| || || ||||| || || || | ||||| | || |||||||| ||
Sbjct 5669808 CTCGAGCGTGATGGTCTTCCCCGTGAGGGTTTTTACGAAAATCTGCATCTT 5669758
>seq145
Length=8547294
Score = 102 bits (112), Expect = 2e-16
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
|||||| | ||| | ||||| | || | ||| | ||| || ||| || || |||||
Sbjct 6750823 ACCACCACGAAGTCTCAATACAAGGTGAAGAGTGGACTCCTTGTGGATGTTGTAGTCAGA 6750882
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
| || || |||| |||| ||||| ||||||||||| | |||||| |||||||| ||
Sbjct 6750883 CAGGGTCCGCCCATCTTCCAGCTGTTTTCCAGCAAAGATGAGTCTCTGCTGATCAGGAGG 6750942
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|||||||| || || || || || || ||||| || | || || | ||| ||
Sbjct 6750943 AATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATTGTGTCCGAGGGTTCAAC 6751002
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| || | ||||| || || || | ||||| | ||| |||||||| ||
Sbjct 6751003 CTCGAGCATGATGGTCTTCCCCGTGAGGGTTTTTACAAAAATCTGCATCTT 6751053
>seq71
Length=16036057
Score = 100 bits (110), Expect = 6e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
|||||| | ||| | ||||| | || | ||| | ||| || ||| || || |||||
Sbjct 9284272 ACCACCACGAAGTCTCAATACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 9284331
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
| || || |||| |||| ||||| ||||||||||| | |||||| |||||||| ||
Sbjct 9284332 CAGGGTCCGCCCATCTTCCAGCTGTTTTCCAGCAAAGATGAGTCTCTGCTGATCAGGAGG 9284391
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|||||||| || || || || || || ||||| || | || || | ||| ||
Sbjct 9284392 AATTCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATTGTGTCCGAGGGTTCAAC 9284451
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || ||||| || || || | ||||| | || ||||||||
Sbjct 9284452 CTCGAGCGTGATGGTCTTCCCCGTGAGGGTTTTTACGAAAATCTGCAT 9284499
>seq339
Length=2240573
Score = 96.9 bits (106), Expect = 7e-15
Identities = 157/226 (69%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
|||||| | ||| | ||||| | || | ||| | ||| || |||||| || |||||
Sbjct 623385 ACCACCACGAAGTCTCAATACAAGGTGAAGAGTGGACTCCTTCTGGATATTGTAGTCAGA 623326
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
| || || |||| |||| || || ||||||||||| | |||||| |||||| | ||
Sbjct 623325 CAGGGTCCGCCCATCTTCCAGCTGCTTTCCAGCAAAGATGAGTCTCTGCTGATCAAGAGG 623266
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|||||||| || || || || || | || ||||| || | || || | ||| ||
Sbjct 623265 AATTCCTTCCTTGTCCTGGATCTTGGTCTTGACATTCTCGATTGTGTCCGAGGGTTCAAC 623206
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534
|| || || ||||| || || || | ||||| | || ||||||
Sbjct 623205 CTCGAGCGTGATGGTCTTCCCCGTGAGGGTTTTTACGAAAATCTGC 623160
>seq257
Length=4087618
Score = 96.9 bits (106), Expect = 7e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
|||||| ||| | ||||| | || | ||| | ||| || ||| || || |||||
Sbjct 3395636 ACCACCATGAAGTCTCAATACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 3395577
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
| || || |||| |||| ||||| ||||||||||| | |||||| |||||||| ||
Sbjct 3395576 CAGGGTCCGCCCATCTTCCAGCTGTTTTCCAGCAAAGATGAGTCTCTGCTGATCAGGAGG 3395517
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|||||||| || || || || || || ||||| || | || || | ||| ||
Sbjct 3395516 AATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATTGTGTCCGAGGGTTCAAC 3395457
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| || || ||||| || || || | ||||| | || |||||||| ||
Sbjct 3395456 CTCGAGCGTGATGGTCTTCCCCGTGAGGGTTTTTACGAAAATCTGCATCTT 3395406
>seq146
Length=8840894
Score = 95.1 bits (104), Expect = 2e-14
Identities = 163/235 (69%), Gaps = 4/235 (2%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| ||| | | || || || | ||| | |||||| ||| || || | |
Sbjct 7957980 ATACCACCTCTCAGATGAAGGACGAAGTGCAGAGTTGACTCTTTCTGGATGTTGTAGTGA 7957921
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | ||| | |||| |||| || || || |||||||| | ||||| || || |||
Sbjct 7957920 GAAAGTGTGTGGCCATCTTCCAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCGGGT 7957861
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAAT--CTGACGATT 192484
|| || || || ||||| || || || |||||||| || | | || ||| | ||
Sbjct 7957860 GGGATGCCCTCCTTATCCTGGATCTTGGCCTTTACATTCTTTTTGGTATTGCTG--GGTT 7957803
Query 192485 CTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
| || || || || ||||| || ||||||| || || | ||| || ||||| ||
Sbjct 7957802 CCACCTCCAGGGTGATGGTCTTGCCAGTTAGGGTCTTTACAAAGATTTGCATATT 7957748
>seq79
Length=15399603
Score = 95.1 bits (104), Expect = 2e-14
Identities = 160/231 (69%), Gaps = 3/231 (1%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
|||||| | ||| | ||||| | || | ||| | ||| | ||| || || |||||
Sbjct 5413675 ACCACCACGAAGTCTCAATACAAGGTGAAGAGTGGACTCCTG---GATGTTGTAGTCAGA 5413619
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
| || || |||| |||| ||||| ||||||||||| | |||||| |||||||| ||
Sbjct 5413618 CAGGGTCCGCCCATCTTCCAGCTGTTTTCCAGCAAAGATGAGTCTCTGCTGATCAGGAGG 5413559
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|||||||| || || || || || || ||||| || | || || | ||| ||
Sbjct 5413558 AATTCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATTGTGTCCGAGGGTTCAAC 5413499
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| || || ||||| || || || | ||||| | || |||||||| ||
Sbjct 5413498 CTCGAGCGTGATGGTCTTCCCCGTGAGGGTTTTTACGAAAATCTGCATCTT 5413448
>seq90
Length=14078501
Score = 93.3 bits (102), Expect = 8e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
|||||| | ||| | ||||| | || | ||| | ||| || ||| || || |||||
Sbjct 1431075 ACCACCACGAAGTCTCAATACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 1431134
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
| || || |||| |||| ||||| ||||||||||| | |||||| |||||||| ||
Sbjct 1431135 CAGGGTCCGCCCATCTTCCAGCTGTTTTCCAGCAAAGATGAGTCTCTGCTGATCAGGAGG 1431194
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|||||||| || || || || || || ||||| || | || || | ||| ||
Sbjct 1431195 AATTCCTTCCTTGTCCTGGATCTTGGCGTTGACATTCTCGATTGTGTCCGAGGGTTCAAC 1431254
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
| || | ||||| || || || | ||||| | || |||||||| ||
Sbjct 1431255 CTTGAGCATGATGGTCTTCCCCGTGAGGGTTTTTACGAAAATCTGCATCTT 1431305
>seq324
Length=2564792
Score = 91.5 bits (100), Expect = 3e-13
Identities = 160/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| ||||| | || | || | || | |||||| ||| || || |||
Sbjct 465133 ATACCACCTCTCAGACGAAGAACGAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAGTCA 465192
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || || |||| |||| || || || |||||||| | ||||| || || |||
Sbjct 465193 GAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGT 465252
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || |||||||| || || || || ||||| || | ||| | ||
Sbjct 465253 GGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTATCGCTGGGCTCC 465312
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| || ||||| ||||| || ||||| | || || | ||| || ||||||||
Sbjct 465313 ACCTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTTACAAAGATTTGCATTTT 465365
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| ||||| | || | || | || | |||||| ||| || || |||
Sbjct 464905 ATACCACCTCTCAGACGAAGAACGAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAGTCA 464964
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || || |||| |||| || || || |||||||| | ||||| || || |||
Sbjct 464965 GAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGT 465024
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || |||||||| || || || || ||||| || | ||| | ||
Sbjct 465025 GGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTATCGCTGGGCTCC 465084
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || ||||| || ||||| | ||||| | || ||||||||
Sbjct 465085 ACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACGAAGATCTGCAT 465134
>seq26
Length=24599883
Score = 91.5 bits (100), Expect = 3e-13
Identities = 171/250 (68%), Gaps = 1/250 (0%)
Strand=Plus/Plus
Query 192291 ACTTTTTAGTTTAAT-AATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTT 192349
|||| || |||| | || |||||| | ||| | ||||| | || | ||| | ||| |
Sbjct 18458636 ACTTCTTCCTTTACTTAACACCACCACGAAGTCTCAATACAAGGTGAAGAGTGGACTCCT 18458695
Query 192350 TAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTA 192409
| ||| || | ||||| || || || |||| |||| || || ||||||||||| |
Sbjct 18458696 TCTGGATGTTGTGGTCAGACAAGGTCCGCCCATCTTCCAGCTGCTTCCCAGCAAAGATGA 18458755
Query 192410 ATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTA 192469
| | || |||||||| ||||||||||| || || || || || || ||||| |
Sbjct 18458756 GTTTTTGCTGATCAGGAGGTATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGA 18458815
Query 192470 TAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATA 192529
| | ||||| | ||| || || | || ||||| || || | | ||||| | || |
Sbjct 18458816 TTGTGTCTGAGGGTTCAACCTCGAACGTGATGGTCTTCCCCGCGAGGGTTTTTACGAAAA 18458875
Query 192530 TCTGCATTTT 192539
||||||| ||
Sbjct 18458876 TCTGCATCTT 18458885
>seq376
Length=1842245
Score = 89.7 bits (98), Expect = 1e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
|||||| | ||| | ||||| | || | ||| | ||| || ||| || || |||||
Sbjct 549717 ACCACCACGAAGTCTCAATACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 549776
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
| || || |||| |||| ||||| ||||||||||| | |||||| |||||||| ||
Sbjct 549777 CAGGGTCCGCCCATCTTCCAGCTGTTTTCCAGCAAAGATGAGTCTCTGCTGATCAGGAGG 549836
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|||||||| || || || || || || ||||| || | || || | ||| |
Sbjct 549837 AATTCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATTGTGTCCGAGGGTTCAGC 549896
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| ||| ||||| || || || | ||||| | || |||||||| ||
Sbjct 549897 --CTCGAGCGATGGTCTTCCCCGTGAGGGTTTTTACGAAAATCTGCATCTT 549945
>seq209
Length=5345101
Score = 89.7 bits (98), Expect = 1e-12
Identities = 160/232 (69%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369
|| || || ||||| | || | || | ||| | |||||| ||| || || |||||
Sbjct 3117804 CCGCCCCTCAGACGAAGGACAAGGTGCAGAGTTGACTCTTTCTGGATGTTGTAGTCAGAA 3117863
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
| || || |||| |||| || || || |||||||| | |||||||| || |||||
Sbjct 3117864 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGTTGGTCGGGTGGG 3117923
Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAAT--CTGACGATTCTA 192487
|| || |||||||| || || || || ||||| || | || ||| | || |
Sbjct 3117924 ATGCCCTCTTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTATTGCTG--GGCTCCA 3117981
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
| || ||||| ||||| || ||||| | || || | ||| |||||||||||
Sbjct 3117982 CCTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTTACAAAGATCTGCATTTT 3118033
>seq44
Length=20396770
Score = 89.7 bits (98), Expect = 1e-12
Identities = 155/224 (69%), Gaps = 1/224 (0%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
|||||| | ||| | ||||| | || | ||| | ||| || ||| || ||||||||
Sbjct 12729012 ACCACCACAAAGTCTCAATACAAGGTGAAGAGTGGACTCCTTTTGGATGTTGTAATCAGA 12728953
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
| || | |||| |||| ||| || ||||||||||| | ||| || |||||||| ||
Sbjct 12728952 CAGGGTCTGCCCATCTTCCAGTTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCAGGAGG 12728893
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| ||||| ||||| || || || || ||||| || | ||||| | ||| ||
Sbjct 12728892 AATGCCTTCCTTATCCTGGATCTTGGCCTTGACATTCACGATTGTGTCTGAGGGTTCAAC 12728833
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCT 192532
|| | || ||||| || || || | ||||| || || ||||
Sbjct 12728832 TT-GATTGTGATGGTCTTCCCCGTGAGGGTTTTTATGAAAATCT 12728790
>seq57
Length=17858683
Score = 87.8 bits (96), Expect = 4e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
|||||| | ||| | ||||| | || | ||| | ||| || ||| || || |||||
Sbjct 12642175 ACCACCACGAAGTCTCAATACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 12642234
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
| || || |||| |||| ||||| ||||||||||| | |||||| | |||||| ||
Sbjct 12642235 CAGGGTCCGCCCATCTTCCAGCTGTTTTCCAGCAAAGATGAGTCTCTGCTTATCAGGAGG 12642294
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|||||||| || || || || || || ||||| || | || | | ||| ||
Sbjct 12642295 AATTCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATTGTGTCCAAGGGTTCAAC 12642354
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| || || ||||| || || | | ||||| | || |||||||| ||
Sbjct 12642355 CTCGAGCGTGATGGTCTTCCCCATGAGGGTTTTTACGAAAATCTGCATCTT 12642405
>seq3
Length=43889205
Score = 87.8 bits (96), Expect = 4e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
|||||| | ||| | ||||| | || | ||| | || || | | || || |||||
Sbjct 10882814 ACCACCACGAAGTCTCAATACAAGGTGAAGAGTGGACTTCTTCTGGTTGTTGTAGTCAGA 10882873
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
| ||||| |||| |||| || || ||||||||||| | ||| || |||||||| ||
Sbjct 10882874 CAGGGTTCGCCCATCTTCCAGCTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCAGGAGG 10882933
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
| |||||| ||||| || || || || ||||| | || | || || | ||| ||
Sbjct 10882934 AAATCCTTCCTTATCCTGGATCTTGGCCTTGACATTCTTGATTGTGTCCGAGGGTTCAAC 10882993
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| || | ||||| || || || | ||||| || || |||| ||| ||
Sbjct 10882994 CTCAAGCATGATGGTCTTCCCCGTGAGGGTTTTTATGAAAATCTCCATCTT 10883044
>seq16
Length=30800738
Score = 86.0 bits (94), Expect = 1e-11
Identities = 143/207 (69%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 192331 AAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAAT 192390
|||| | ||| | |||||| ||| || || ||||| | || || |||| ||||
Sbjct 5646763 AAATCCATAGTGGACTCTTTCTGGATGTTGTATTCAGACAGGGTGTGTCCATCTTCCAGC 5646704
Query 192391 TGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATT 192450
||||||||||||||||| | ||||| || ||||| || || |||||||| |||| ||
Sbjct 5646703 TGTTTACCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTGCCTTGGATC 5646644
Query 192451 TTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 192510
|| || ||||| || | || | || | || || || ||| |||| |||
Sbjct 5646643 TTTGCCTTGACATTCTCAATGGTGTCACTTGGCTCAATGTCAAGGGTGATGATTTTGCCA 5646584
Query 192511 GTTAATGTTTTAATAAATATCTGCATT 192537
|| || || || | ||| |||||||||
Sbjct 5646583 GTCAAGGTCTTCACAAAGATCTGCATT 5646557
>seq254
Length=4162030
Score = 84.2 bits (92), Expect = 4e-11
Identities = 130/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413
||| || || ||||| | || || |||| |||| || || ||||||||||| | |
Sbjct 3417055 GATGTTGTAGTCAGACAGGGTCCGCCCATCTTCCAGCTGCTTTCCAGCAAAGATGAGCTT 3417114
Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473
|| |||||||| || |||||||| || || || || || || ||||| || |
Sbjct 3417115 TTGCTGATCAGGAGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATTGT 3417174
Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533
||||| | ||| || || || || ||||| || || || | ||||| || || |||||
Sbjct 3417175 GTCTGAGGGTTCAACCTCAAGCGTGATGGTCTTCCCCGTGAGGGTTTTTATGAAAATCTG 3417234
Query 192534 CATTTT 192539
||| ||
Sbjct 3417235 CATCTT 3417240
>seq132
Length=9596125
Score = 84.2 bits (92), Expect = 4e-11
Identities = 160/236 (68%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 192304 ATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAA 192363
||||||||||| | ||||||| || | ||| | || | |||||| || || ||
Sbjct 5547274 ATAATACCACCACGCAGACGTAGCACCAGATGCAGGGTGGACTCTTTCTGCATGTTGTAG 5547333
Query 192364 TCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCA 192423
| || | ||| || |||| || | ||||| || ||||| || | ||| || |||
Sbjct 5547334 CCTGAGAGTGTACGGACATCCTCTAGCTGTTTGCCCGCAAATATGAGATGCTGCTGGTCA 5547393
Query 192424 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGAT 192483
|| || || || ||||| ||||| ||||| ||| ||||| | || | || |
Sbjct 5547394 GGAGGGATGCCCTCTTTGTCTTGGATTTTGGCTTTGACATTCTTAATGGTGTCATTGGGC 5547453
Query 192484 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| || || ||||| ||||| || ||||| | || || | ||| |||||||| ||
Sbjct 5547454 TCGACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATCTT 5547509
>seq82
Length=15125257
Score = 84.2 bits (92), Expect = 4e-11
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439
|||| |||| || || ||||||||||| | |||||| || ||||| || |||||||| |
Sbjct 11170953 CATCTTCCAGCTGCTTTCCAGCAAAGATGAGTCTCTGCTGGTCAGGAGGAATTCCTTCCT 11170894
Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499
| || || ||||| || ||||| || | || || | ||| ||||| || || |
Sbjct 11170893 TGTCCTGGATTTTGGCCTTGACATTCTCGATTGCGTCCGAGGGTTCAACTTCGAGCGTGA 11170834
Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTA 192540
|||| || || || | ||||| | || ||||||| |||
Sbjct 11170833 TGGTCTTCCCCGTGAGGGTTTTTACGAAAGTCTGCATCTTA 11170793
>seq77
Length=15139199
Score = 84.2 bits (92), Expect = 4e-11
Identities = 136/191 (71%), Gaps = 6/191 (3%)
Strand=Plus/Minus
Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413
|||||| || ||||| || || | ||||| |||||||| | ||||||||||| |||
Sbjct 11280826 GATATTGTAGTCAGACAAGGTCTGCTCATCTTCCAATTGCATTCCAGCAAAGATGGGTCT 11280767
Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTA-TAG 192472
||||||||||| || |||||||| ||| | || || || | || ||||| || | | |
Sbjct 11280766 TTGTTGATCAGGAGGAATTCCTTCCTTACCCTGAATCTTGGTCTTGACATT-GTCAGTTG 11280708
Query 192473 AATCTGACGATTCTACTTCTAGAGTAATGGT-TTTA---CCAGTTAATGTTTTAATAAAT 192528
|| | | ||| || || || |||||| |||| || || | ||||| || ||
Sbjct 11280707 TGTCCAAGGGTTCAACCTCGAGCACAATGGTATTTATTCCCTGTGAGGGTTTTTATGAAA 11280648
Query 192529 ATCTGCATTTT 192539
|||| ||| ||
Sbjct 11280647 ATCTTCATCTT 11280637
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984369403516800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |