Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq246 98.7 3e-15 >seq246 Length=4228409 Score = 98.7 bits (108), Expect = 3e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679 || || |||||||| ||||| || || |||| || ||||| || |||||||| | ||| Sbjct 2140637 GTCTTGACAGCTGTGTCAATGAGTCCCTCACGGCCCCCCATGGCGTGGAAGAAGAACTCA 2140578 Query 302680 TCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATC 302738 || ||| || || | | |||| |||| || || ||||| ||| ||| || Sbjct 2140577 GTGGG-CGTGAGGCCAGCCAAGTAGGAATTCTCCACAAAGCCACGGCTCTCAGGCCCATA 2140519 Query 302739 GTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCC 302798 |||| ||| | ||||| ||||| ||||||| || | | ||| | ||||| ||||| || Sbjct 2140518 GTCGTCTTTGATGAAGTGAGGCAGAGTCCTGTGCTTAAAACCGAACGGGATCCGCTTGCC 2140459 Query 302799 ATCAACGTTCTGCTGTCC 302816 || ||||||||||| || Sbjct 2140458 CTCCACGTTCTGCTGCCC 2140441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471652256010816