Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq538 167 3e-35 seq70 161 1e-33 seq133 159 4e-33 seq599 158 1e-32 seq433 152 6e-31 seq384 125 9e-23 seq16 114 2e-19 seq260 91.5 2e-12 seq355 87.8 2e-11 >seq538 Length=411127 Score = 167 bits (184), Expect = 3e-35 Identities = 167/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| || Sbjct 13590 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 13649 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| | |||||||| ||| |||||| | ||||||| |||| | Sbjct 13650 TGGTGGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCCTCGCCGGCGATGCGCTCGAAGA 13709 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | ||| ||||||||| |||||||| Sbjct 13710 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTAGAGGAGATGCCGGTGTCGGGGT 13769 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | |||||||| ||||||||||| | | || |||||| Sbjct 13770 GGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 13806 >seq70 Length=16419674 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| || Sbjct 106509 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 106450 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| | |||||||| ||| |||||| | ||||||| |||| | Sbjct 106449 TGGTGGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCCTCGCCGGCGATGCGCTCGAAGA 106390 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | ||| ||||||||| |||||||| Sbjct 106389 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTAGAGGAGATGCCGGTGTCGGGGT 106330 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 106329 GGACCTGCTTCAGCACCTTGTA 106308 Score = 158 bits (174), Expect = 1e-32 Identities = 156/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| || Sbjct 46640 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 46699 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| ||| |||||| | ||||||| |||| | Sbjct 46700 TGGTAGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCCTCGCCGGCGATGCGCTCGAAGA 46759 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | ||| ||||||||| |||||||| Sbjct 46760 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTAGAGGAGATGCCGGTGTCGGGGT 46819 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 46820 GGACCTGCTTCAGCACCTTGTA 46841 Score = 149 bits (164), Expect = 8e-30 Identities = 154/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | | || ||||||||| ||||||||||| |||| || Sbjct 117995 GCTTGGCCAGCTCCCCGGGTAGCAGCAAGCGCACGGCAGTCTGGATCTCCCGCGATGTGA 118054 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| | |||||||| ||| |||||| | ||||||| |||| | Sbjct 118055 TGGTGGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCCTCGCCGGCGATGCGCTCGAAGA 118114 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | ||| |||||| || |||||||| Sbjct 118115 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTAGAGGAGATTCCGGTGTCGGGGT 118174 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 118175 GGACCTGCTTCAGCACCTTGTA 118196 Score = 149 bits (164), Expect = 8e-30 Identities = 154/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | |||||||||||| ||||||||||| |||| || Sbjct 209656 GCTTGGCCAGCTCCCCAGGCAACAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 209597 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| ||| |||||| ||||||| |||| | Sbjct 209596 TGGTAGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCCTCGCCAGCGATGCGCTCGAAGA 209537 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | ||| ||||||||| |||||||| Sbjct 209536 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTAGAGGAGATGCCGGTGTCGGGGT 209477 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 209476 GAACCTGCTTCAGCACCTTGTA 209455 Score = 140 bits (154), Expect = 4e-27 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 ||||| || || ||| | |||||||||||| ||||||||||| |||| ||| ||| Sbjct 130738 GCCAGCTCCCCAGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGATGGTG 130797 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 |||||||| | |||||||| ||| |||||| | ||||||| |||| |||||| Sbjct 130798 GAACGCTTGTTGTAATGCGCCAGGCGGGACGCCTCGCCGGCGATGCGCTCGAAGATGTCG 130857 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 ||||| || |||||||||| ||| | || |||||| || ||||||||| ||| Sbjct 130858 TTGACGAAGGAGTTCATGATGCCCATGGCTTTAGAGGAGATTCCAGTGTCGGGGTGGACC 130917 Query 1254528 TGCTTGAGCACCTTGTA 1254544 ||||| ||||||||||| Sbjct 130918 TGCTTCAGCACCTTGTA 130934 Score = 134 bits (148), Expect = 2e-25 Identities = 151/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||| |||||| ||||||||||| |||| || Sbjct 162214 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCACACGGCCGTCTGGATCTCACGCGACGTGA 162273 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 ||| ||||||||| | |||||||| ||| |||||| | ||||||| || | | Sbjct 162274 CGGTGGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCCTCGCCGGCGATGCGCTCTAAGA 162333 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| ||||| |||||| ||| || | ||| ||||||||| |||||||| Sbjct 162334 TGTCGTTCACAAAGGAGTTCGTGATGTCTATGGCCTTAAAGGAGATGCCAGTGTCGGGGT 162393 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | | |||||| ||||||||||| Sbjct 162394 GGATCTGCTTCAGCACCTTGTA 162415 Score = 131 bits (144), Expect = 2e-24 Identities = 150/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | || |||||||| ||||||||||| |||| || Sbjct 61812 GCTTGGCCAGCTCCCCGGGCAACAGCAAACGCACGGCCGTCTGGATCTCCCGCGACGTGA 61871 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| | |||||||| ||| |||||| ||||||| |||| | Sbjct 61872 TGGTAGAACGCTTGTTATAATGCGCCAGGCGGGACGCCTCGCCAGCGATGCGCTCGAAGA 61931 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | |||||||| || |||||||||| ||| | ||| ||||||||| |||||||| Sbjct 61932 TATCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTAGAGGAGATGCCGGTGTCGGGGT 61991 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||| ||||| Sbjct 61992 GAACCTGCTTCAGCACTTTGTA 62013 Score = 107 bits (118), Expect = 2e-17 Identities = 145/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | | |||| ||||||| ||||||||||| || | || Sbjct 324998 GCTTGGCCAGCTCCCCGGGTAGCAGCAGGAGCACGGCCGTCTGGATCTCCCGGGACGTGA 325057 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| | ||||||| | ||| |||| | | || ||| || ||||| | |||| | Sbjct 325058 TGGTGGAGAGCTTGTTGTAATGCACCAGGCTGGACGCATCGCTGGCGATGTGCTCGAAGA 325117 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || ||||| |||| ||| | |||| |||||||| || ||||| Sbjct 325118 TGTCGTTGACGAAGGAGTTTATGATACCCATGGCCTTGGACGAGATGCCAGTGTAGGGGT 325177 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | || ||||| |||| ||||| Sbjct 325178 GGACTTGCTTCAGCAGTTTGTA 325199 >seq133 Length=9540608 Score = 159 bits (176), Expect = 4e-33 Identities = 159/205 (78%), Gaps = 6/205 (3%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCG---CGTGC 1254399 || ||||||| || ||| ||| | |||||||||||| ||||| | ||| || ||||| Sbjct 4089356 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGCACCTCCCGGGACGTGC 4089297 Query 1254400 CGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459 | ||| | |||||||| |||||||||| ||| ||||||| || ||||||| |||| Sbjct 4089296 TGGTCGAG---CGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCGA 4089240 Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519 ||||||||||| || |||||||||| ||| | |||| |||||||| ||| | Sbjct 4089239 AGATGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCAGTGTCCG 4089180 Query 1254520 GGTGCACCTGCTTGAGCACCTTGTA 1254544 ||||||||||||| ||||||||||| Sbjct 4089179 GGTGCACCTGCTTCAGCACCTTGTA 4089155 Score = 158 bits (174), Expect = 1e-32 Identities = 156/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||| | ||| || | || Sbjct 4107701 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGCACCTCCCGGGACGTGA 4107760 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| ||| ||||||| || ||||||| |||| | Sbjct 4107761 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCGAAGA 4107820 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| ||| |||| Sbjct 4107821 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCAGTGTCCGGGT 4107880 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 4107881 GCACCTGCTTCAGCACCTTGTA 4107902 >seq599 Length=189898 Score = 158 bits (174), Expect = 1e-32 Identities = 156/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | || ||||||||| ||||||||||| |||| || Sbjct 179229 GCTTGGCCAGCTCCCCGGGCAACAGCAAGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 179170 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| | |||||||| ||| |||||| | ||||||| |||| | Sbjct 179169 TGGTGGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCCTCGCCGGCGATGCGCTCGAAGA 179110 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | ||| ||||||||| |||||||| Sbjct 179109 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTAGAGGAGATGCCGGTGTCGGGGT 179050 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 179049 GGACCTGCTTCAGCACCTTGTA 179028 Score = 152 bits (168), Expect = 6e-31 Identities = 153/199 (77%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || ||| ||| | || ||||||||| ||||||||||| |||| ||| | Sbjct 151112 TGGCCAGCTCCCCGGGCAACAGCAAGCGCACGGCCGTCTGGATCTCCCGCGACGTGATGG 151053 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 || ||||||||| | |||||||| ||| |||||| ||||||| |||| |||| Sbjct 151052 TGGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCCTCGCCAGCGATGCGCTCGAAGATGT 150993 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||| || |||||||||| ||| | ||| ||||||||| ||||||||| | Sbjct 150992 CGTTGACGAAGGAGTTCATGATGCCCATGGCCTTAGAGGAGATGCCGGTGTCGGGGTGGA 150933 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| ||||||||||| Sbjct 150932 CCTGCTTCAGCACCTTGTA 150914 >seq433 Length=1104632 Score = 152 bits (168), Expect = 6e-31 Identities = 164/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | | || ||||||||| ||||||||||| |||| || Sbjct 1074250 GCTTGGCCAGCTCCCCGGGTAGCAGCAAGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 1074309 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| | |||||||| ||| ||||| | ||||||| |||| | Sbjct 1074310 TGGTGGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCCTCACCGGCGATGCGCTCGAAGA 1074369 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | ||| ||||||||| |||||||| Sbjct 1074370 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTAGAGGAGATGCCGGTGTCGGGGT 1074429 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | |||||||| ||||||||||| | | || |||||| Sbjct 1074430 GGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 1074466 Score = 91.5 bits (100), Expect = 2e-12 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 1254450 ATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATG 1254509 ||||| |||| ||||||||||| || |||||||||| ||| | ||| ||||||| Sbjct 1104632 ATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTAGAGGAGATG 1104573 Query 1254510 CCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 || ||||||||| |||||||| ||||||||||| | | || |||||| Sbjct 1104572 CCGGTGTCGGGGTGGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 1104523 >seq384 Length=1635709 Score = 125 bits (138), Expect = 9e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| ||||| | | | |||||||||||||||||||||||| || | || Sbjct 1283201 GCTTGGCCAGCTCGCCAGGAAGCAGCAGGCGCACGGCGGTCTGGATCTCCCGGGAAGTGA 1283142 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || ||||| ||| || || | ||||||| |||| | Sbjct 1283141 TGGTCGAGCGCTTGTTGTAATGTGCCAGGCGGGACGCTTCTCCGGCGATGCGCTCGAAAA 1283082 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || |||||||||| ||| | |||| |||||||| |||||| | Sbjct 1283081 TGTCGTTAACGAAAGAGTTCATGATACCCATGGCCTTGGACGAGATGCCAGTGTCGGGAT 1283022 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | ||||| || ||||||||||| Sbjct 1283021 GGACCTGTTTCAGCACCTTGTA 1283000 Score = 120 bits (132), Expect = 4e-21 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| ||||| | | | |||||||||||| ||||| ||||| || | || Sbjct 1298665 GCTTGGCCAGCTCGCCAGGAAGCAGCAGGCGCACGGCCGTCTGAATCTCCCGGGAAGTGA 1298606 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || ||||| ||| || ||| | ||||||| |||| | Sbjct 1298605 TGGTCGAGCGCTTGTTGTAATGTGCCAGGCGGGACGCTTCGCCGGCGATGCGCTCGAAGA 1298546 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | ||| |||||||| ||| || | Sbjct 1298545 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCTTTGGACGAGATGCCGGTGTCTGGAT 1298486 Query 1254523 GCACCTGCTTGAGCACCTTGTAGA 1254546 | |||||||| ||||| ||||||| Sbjct 1298485 GGACCTGCTTCAGCACTTTGTAGA 1298462 Score = 120 bits (132), Expect = 4e-21 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| ||||| | | | |||||||||||| ||||| ||||| || | || Sbjct 1319701 GCTTGGCCAGCTCGCCAGGAAGCAGCAGGCGCACGGCCGTCTGAATCTCCCGGGAAGTGA 1319760 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || ||||| ||| || ||| | ||||||| |||| | Sbjct 1319761 TGGTCGAGCGCTTGTTGTAATGTGCCAGGCGGGACGCTTCGCCGGCGATGCGCTCGAAGA 1319820 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | ||| |||||||| ||| || | Sbjct 1319821 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCTTTGGACGAGATGCCGGTGTCTGGAT 1319880 Query 1254523 GCACCTGCTTGAGCACCTTGTAGA 1254546 | |||||||| ||||| ||||||| Sbjct 1319881 GGACCTGCTTCAGCACTTTGTAGA 1319904 >seq16 Length=30800738 Score = 114 bits (126), Expect = 2e-19 Identities = 148/203 (73%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||||||||| ||||||||||| | | || Sbjct 28456700 GCTTGGCCAGCTCCCCGGGCAGCAGTAGGCGCACGGCCGTCTGGATCTCCTGGGATGTGA 28456759 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| || |||||| | |||||||| || |||| | | ||||||| |||| | Sbjct 28456760 TGGTGGAGCACTTGTTGTAATGCGCCAGGTGGGACGCCTTGCCGGCGATGCGCTCGAAGA 28456819 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTC-GGGG 1254521 |||| ||||| || |||||||||| ||| | ||| ||||||| ||| |||| Sbjct 28456820 TGTCCTTGACGAAGGAGTTCATGATGCCCATGGCCTTAGAGGAGATGGTGGTGTCGGGGG 28456879 Query 1254522 TGCACCTGCTTGAGCACCTTGTA 1254544 || |||||||| ||||||||||| Sbjct 28456880 TGGACCTGCTTCAGCACCTTGTA 28456902 >seq260 Length=4120640 Score = 91.5 bits (100), Expect = 2e-12 Identities = 135/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 1592108 AAGCGCACCGACGACATC-TCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCAC 1592166 ||| | || || |||||| ||| |||||| | || || | | || || ||| || Sbjct 2228689 AAGAGAACAGATGACATCCTCGTT-TGGGACCAAGAATTCTTGAAAGTTGACCAGGGAAC 2228747 Query 1592167 CCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGG 1592226 || ||||| || || || || || |||||| | || ||||| || |||| ||| || Sbjct 2228748 ACTTTTTGAATTTATTCTGGCTGCAAACTACTTAGATATCAAAGCTTTGCTTGATGTTAC 2228807 Query 1592227 GTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTT 1592286 |||||| |||| ||||| ||||||||||| | | || |||||||| |||||||| || Sbjct 2228808 ATGCAAGACTGTTGCCAATATGATCAAGGGGGAAACTCCTGAGGAGATTCGCAAGACTTT 2228867 Query 1592287 TAACATCAA 1592295 || || || Sbjct 2228868 CAATATTAA 2228876 >seq355 Length=2041937 Score = 87.8 bits (96), Expect = 2e-11 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 1592108 AAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCACC 1592167 ||| | || || |||||| | |||||| | || || | | || || ||| || Sbjct 1267532 AAGAGAACAGATGACATCCCCGTTTGGGACCAAGAATTCTTGAAAGTTGACCAGGGAACA 1267591 Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227 || ||||| | || || || || ||||| | |||||||| | |||| ||| || Sbjct 1267592 CTTTTTGAACTTATTCTGGCTGCAAACTATTTAGACATCAAAGGTTTGCTTGATGTTACA 1267651 Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287 |||||| |||| ||||| ||||||||||| || | || |||||||| |||||||| || Sbjct 1267652 TGCAAGACTGTTGCCAATATGATCAAGGGGAAAGCTCCTGAGGAGATTCGCAAGACTTTC 1267711 Query 1592288 AACATCAA 1592295 || || || Sbjct 1267712 AATATTAA 1267719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106419656859456