Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq33 82.4 7e-11 >seq33 Length=21904142 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 137199 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 137258 ||| || | ||||| || || || || || |||||||| || || || | | || Sbjct 10626746 CAATACAAGATGAAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTCCGCCCATC 10626805 Query 137259 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 137318 ||| || ||||| |||||| |||| || | |||||||| ||||| || ||||| ||||| Sbjct 10626806 TTCCAGCTGTTTTCCAGCAAAGATGAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTGTC 10626865 Query 137319 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGT 137378 || || || | | || | ||||| | |||||| || || | || | || Sbjct 10626866 CTGGATCTTGGCCTTCACATTCTCGATTGTGTCCGAGGGTTCAACCTCGAGCGTGATGGT 10626925 Query 137379 CTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 ||| || || | ||||||||||| || ||||| Sbjct 10626926 CTTCCCCGTGAGGGTTTTTACGAAAATCTGCAT 10626958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488490455577600