Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq108 84.2 2e-11 >seq108 Length=12252355 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||| |||||| | |||||||| || | || || || | ||||| | || || || | Sbjct 7287834 CAAAATGCAAATCTTTGTAAAGACCCTCACTGGCAAGACCATCACTCTGGAGGTGGAGCC 7287775 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 || |||||| |||||| | || || || || ||||||||||| || || ||||| Sbjct 7287774 CAGCGATACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAAGAGGGCATCCCACCCGA 7287715 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 ||||| || ||||| | | ||||| || || ||||||| | | ||| || || Sbjct 7287714 CCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTGTTTCTGACTA 7287655 Query 25351 CAATATTCAAAAAGAATCCAC 25371 ||| || || ||||| || || Sbjct 7287654 CAACATCCAGAAAGAGTCAAC 7287634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445045617653760