Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elephantulus_20edwardii_20[refseq_20GCF_5F000299155.1_202012-10-10] 8,768 sequences; 3,843,982,861 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq94 230 3e-55 seq11 185 1e-41 seq2236 141 1e-28 seq44 123 3e-23 seq223 120 4e-22 seq28 113 6e-20 seq16 107 3e-18 seq20 104 3e-17 seq9 104 3e-17 seq202 102 1e-16 >seq94 Length=13213440 Score = 230 bits (254), Expect = 3e-55 Identities = 544/810 (67%), Gaps = 34/810 (4%) Strand=Plus/Plus Query 47918 ATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATC 47977 |||||||||||| ||| | | | || ||||| || | |||| | || ||||| || Sbjct 4997623 ATCAAATGGATTTACTC---TGAACACCTTGTTAAAACCCAGTTCTAACATTAGTCTGTC 4997679 Query 47978 TGCAACGAATTCTATATATCTTTTCA-TCATTTCACAATTCATTCCTATAAGTTTAACTG 48036 ||| || ||||| | | ||| | | | | |||| |||| || ||||| || || | Sbjct 4997680 TGCCACAAATTCAAAGT-TCTATGCCGTTAAGGTACAACTCATCCCAATAAGCTTCACAG 4997738 Query 48037 GTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCGATGTTA 48096 | ||||| | ||| ||||| || || || | ||||||| || || || || Sbjct 4997739 GCGAGGCCTCAGGAAGTAACTCCTGCTCCATCCTAACAGCATTAACAAT----GACTTT- 4997793 Query 48097 CCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATCACAAT 48156 |||||| || || ||| || ||||| |||| | ||||| ||||| | Sbjct 4997794 ---TTTCCT---TTTGTC--TAC--CAGGTGTTTGAACAGCAGGTGAGCAAAGTCACAGT 4997843 Query 48157 GAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCAC 48216 | | ||||||||||| ||| | | ||| | ||||||||||| || |||| ||| | | Sbjct 4997844 GTAAGCCTTCATCTCTGCTAGTAAGTTCACTGGAAAATGTGAGGCCAGGCACCAGTTCTC 4997903 Query 48217 GTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCG 48276 ||| |||||||| ||||||| || ||||| | || |||| | ||||| || || | Sbjct 4997904 ATTTCTTGAGCCAGAATATTGATGCAAAAGAACTGGAGAAGATT---CCTTCCACTGCTG 4997960 Query 48277 CAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGTAT---CCACCGTTGTGCCC 48333 |||| || | ||||||||||| | ||| |||| ||| || |||| Sbjct 4997961 CAAAGGCTACGACACTCTCTCCGTAGGTAATTTCTTTGTTCCCAGCCCAACGCAAGGCCC 4998020 Query 48334 AATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGttttttt 48393 | || || |||||||||||| ||||||||||| || ||||| | |||||| | || Sbjct 4998021 AGTCTGCTGCCTTCTTTACACAGGGCATTGTTTCAATGGCATTGATGAGAAATTCCCATT 4998080 Query 48394 CATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTT 48453 | || |||||||| || || || | |||||||||||||| || || || |||| Sbjct 4998081 CCTTAGGATCTTTAATGTG----TCAATAAGGAGACTATACATTTCAGAATGTATGTTTT 4998136 Query 48454 CAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAA 48513 | || || || || || || || ||||| | |||||||| ||||| || || | || Sbjct 4998137 CCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGGACTTCTTGGCTAA 4998196 Query 48514 ATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACAT 48573 | || || ||| || ||||| ||| | |||||||| |||||||| || || | |||| Sbjct 4998197 ACCGCTCCACCAGGTTTTCATTCACTGTGCCATCACTTGCAGCAAAGAAGGCCAGAACAT 4998256 Query 48574 GTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATA 48633 | ||||| || | || | || | || | ||||| | || ||||| || | Sbjct 4998257 GGGATATAAAGTAACTCTCCTCAGACTTAAGGGCTTCCCAGTGCTAAATGTCTTTGGAAA 4998316 Query 48634 TATCTA-CTTCTTCAGCTG-TCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 ||| | || ||| | || | ||||| || |||| ||||| ||| |||| | ||| || Sbjct 4998317 GATCAATCTCCTT--GGTGTTTCAAAAGGAAGCCTGAGCTTTCTTAGACATCTGCCAAAT 4998374 Query 48692 ATCACTGTATTGGATTGGGAAAATAACAAA 48721 ||| ||||| | || |||| ||||| Sbjct 4998375 GTCATGGTATTCAACAGGAAAAACGACAAA 4998404 >seq11 Length=32252908 Score = 185 bits (204), Expect = 1e-41 Identities = 513/779 (66%), Gaps = 56/779 (7%) Strand=Plus/Plus Query 47785 TTATGGTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTATCTT---CTTGAGACATAA 47841 || || || |||| ||||| |||| || ||| ||| | || ||||| | | | Sbjct 31684713 TTCTGTTTGTTTAGAAGTCTGCATCCAAGATGAAAGAATTCTGTTAGACTTGA--CCTTA 31684770 Query 47842 CTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATG 47901 ||||||| | ||||| | || || ||||| | |||| ||| || | |||| || Sbjct 31684771 CTCCCATCCTCTGATACTTGCCTACGTTCTTCTCAGAGAAATCAGTCTTCCTTTCCG-TG 31684829 Query 47902 ATATATTTTCCAT-AAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAAT 47960 | ||||| | ||| ||||| ||||||||| | | || | | || |||| | | | Sbjct 31684830 AAATATTCTTCATGAAAATAAAATGGATTTTATACTCTAAACACCTTGTTAAGCTCCAGT 31684889 Query 47961 TCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCA---CAATTC 48017 | | || ||||| ||||| || ||||| | || | || || | |||||| Sbjct 31684890 ACCGGCATTAGTCTGTCTGCCACAAATTCAAGGTAA---TGCACCACTGAGGTGCAATTC 31684946 Query 48018 ATTCCTATAAGTTTAACTGGTA--GA--GCCTCCGTAAGAAACTCTTGTTCGATAGTGAC 48073 || || | ||| || || || | || ||||| ||||| ||||| ||||| || | Sbjct 31684947 ATCCCAAAAAGCTTCACAGGCAAGGAAGGCCTCAGTAAGGAACTCCTGTTCTATCTGAAT 31685006 Query 48074 AGCATCCACTATTATCGATGTTACCG--TTTCCTCACTTGGTGGATACAACAAATGTTTA 48131 ||||| || ||||| | || | ||| || | ||| || | || ||||| Sbjct 31685007 AGCATTAACAATTATTTCTTTTTCTTGCTTTTCTGAG--GGTTTATGTACCAGGTGTTTG 31685064 Query 48132 AACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAA 48191 |||| || || ||||| ||||| || | ||| ||| ||||||| || | ||| || ||| Sbjct 31685065 AACACTAGGCAAGCAAAGTCACAGTGTACACCCTCAACTCTACTCATAAGTTCATTGGAA 31685124 Query 48192 AATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCA 48251 |||||| | || ||| ||||||| | ||| |||||||| ||||||| | | ||||| || Sbjct 31685125 AATGTGGGGCCAGGCCTTAGTCCTCATTTCTTGAGCCAGAATATTGGCAC-AAAGAAGCA 31685183 Query 48252 GAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCG 48311 ||| |||| || ||||| || || || || || | | ||| | || Sbjct 31685184 GAACAGAAGATTCCTTCCACTGCTGCCAAGGC------------TAC--AACACGTTT-- 31685227 Query 48312 TTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATA 48371 |||| | | |||| |||||||||||||| ||||| |||| || Sbjct 31685228 -------TCCATC----------AGCAGC-TTCTTCTTTACACAGGGCATCATTTCAATG 31685269 Query 48372 GCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTA 48431 ||||| |||||||| | ||| || |||||||| |||||| || || | |||||| Sbjct 31685270 GCATTGAAGAGAAATTCCCATTCCTTAGGATCTTTAATGTAAGTGTCAATAAGGAGACTA 31685329 Query 48432 TACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCT 48491 |||||||| || || || ||||| | || || || || || | ||||| |||||| Sbjct 31685330 TACATTTCAGAATGTATGTTTTCCAAGGCAATTTGGAAGCCACAGAAACAGTGAGCTTCT 31685389 Query 48492 GTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACT 48550 || ||| || || | ||| ||||| | || || || || ||||| |||||||| Sbjct 31685390 GTAATCCAGACTTCTTGGCTAAACCGTTCTGTCAGGTTTTCGTTCACTATGCCATCACT 31685448 >seq2236 Length=6892 Score = 141 bits (156), Expect = 1e-28 Identities = 250/358 (70%), Gaps = 11/358 (3%) Strand=Plus/Minus Query 45876 TCCAGTGGATCCAAATCCT--TGAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCC 45933 |||||| || ||||| ||| ||| | | |||||||| |||| | | ||| |||||| Sbjct 2903 TCCAGTAGAACCAAAACCTCCTGAAC--CCCTTTCAGTGTCATCCAAAACTTGAACTTCC 2846 Query 45934 TTCAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATTT 45993 | | || |||||| | || |||| | | || || || || || | |||| || | ||| Sbjct 2845 TCTATTTCTGGATAAAAAATCCGTTCACAAATAAGCTGTGCAATCCGATCAACCTTTTTT 2786 Query 45994 ATTTCAAATATATCTTTTCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATCT 46053 | | ||||| | ||||| ||| ||| | ||| | || |||| | ||||| |||||| Sbjct 2785 ACTCCAAATTTTTCTTTGCCAAAATTAAACAGTACAACACCAACATTTCCTCTGTAATCT 2726 Query 46054 TCATCTATTACTCCCCCTCCCACATC---GATACCTTTTAGAGACAGTCCAGATCTAGGA 46110 |||||||| || || |||| ||||| || | |||| || || ||||| | ||| Sbjct 2725 TCATCTATCACACCAGCTCCTACATCTATGAAATGTTTTTCAGCCAAGCCAGAACGTGGA 2666 Query 46111 GCTATTCTTCCATAACAGAATTTGGGCATAGACATCCGAATATCTGTTTTAATCAATCTC 46170 |||| |||| ||||||| | || | | ||| |||| |||||||| | ||| Sbjct 2665 GCTACTCTTTCATAACACCCCTAAGGAAGGGCTATCTGAATGTCTGTTTTCA-CAA-GGG 2608 Query 46171 CTTTCTCCA--GGAGGGATAGTATAGTCGTACGCACTGTATAAATCATATCCTGCTGC 46226 ||||||||| || || | ||||| || || |||||||| || || || ||||| || Sbjct 2607 CTTTCTCCATGGGTGGAACGGTATAATCATAAGCACTGTACAAGTCGTAGCCTGCGGC 2550 >seq44 Length=20396770 Score = 123 bits (136), Expect = 3e-23 Identities = 130/171 (76%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908 |||| |||||||||||||| || || |||||| ||| |||| || || || || || | Sbjct 12594163 TCCAGCCGTAGAAATGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 12594222 Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968 ||| ||||| |||||||| |||||||| ||||| ||||| ||||| || | | ||| | Sbjct 12594223 TCAGAGACTGGCTTTGATCTATGAAAGCCCCTCTCTCAGCTGCCATCTTGAGTACGGTTT 12594282 Query 76969 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 77019 |||||| ||||||||| | || || ||| || || | ||||| |||| Sbjct 12594283 TTTGAGAAATTTCCCACACCGTCTTATAAAGCTGCTTCAAGTCATCGGGAA 12594333 Score = 105 bits (116), Expect = 9e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458 || || ||||| || | || ||||| ||||| |||||||| || ||||| || || ||| Sbjct 12623880 GTCCCAGCATTGAAGAGGGTAGGAGAAGCATGAGTAAACCACTTCTCAGACAGAAGGTTG 12623939 Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518 |||||||||||||| | || || || || ||||| || || | ||| | ||||| | Sbjct 12623940 TATGTTTCAATAGCAGCATCAATATCTTCTTTGTGAATCCCGACAGATACCCTCATCAGC 12623999 Query 78519 ATATGCTGAGGTCTTTCAACC 78539 |||||||| ||||||||| || Sbjct 12624000 ATATGCTGTGGTCTTTCAGCC 12624020 Score = 102 bits (112), Expect = 1e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 ||||||||||| ||||| || || ||||| || |||| ||||||||| | || | ||| Sbjct 12616089 ACTCGTTTCATGAAGAGGTCTGGAATCCAAAGGGCAAAAAATAGATCCCTGGCACGCTGT 12616148 Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122 ||||| ||||| || ||||| || | ||| || ||||| | || || |||||||||| Sbjct 12616149 TCTTCCTTTCCCGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCATGGC 12616208 Query 78123 TCTAGATATATTGCCATAACTCCAGGTCG 78151 || | || || || | |||||||||| Sbjct 12616209 TCCAAGTAAATAGCAAATGCTCCAGGTCG 12616237 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 77355 GATCCATTATATGTTTCATAAGGTCCTT-CTGTTTCAGCTAGTTCACAACTCGCTTCCAA 77413 || || | ||| ||||| ||||| || || || ||| ||||||||||| |||||||| Sbjct 12613386 GAGCCTTCATAGGTTTCGTAAGGGCCAAGCTCCTT-AGCCAGTTCACAACTGGCTTCCAA 12613444 Query 77414 TGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATC 77473 ||||| |||||||| ||||| || || | ||||| || || || || ||| || Sbjct 12613445 AGCTCCATAATAAATGGTTTCAAATATTTGTTTATTCAGTAACTGGGCCTCTGGACTCTC 12613504 Query 77474 AAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGG 77533 ||| ||||| | || || || |||||||||| || || || ||||| ||||| || Sbjct 12613505 AAAAGGATATCTCATCAGGATGAAAGCATCTGCTAGACCTTGGACCCCAATTCCAATGGG 12613564 Query 77534 TCTATGTCTCTTATTGGA 77551 | ||| | ||||| || Sbjct 12613565 ACGATGGCGTTTATTTGA 12613582 >seq223 Length=5023716 Score = 120 bits (132), Expect = 4e-22 Identities = 98/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 |||||||| ||||| | ||| || ||||| ||||| || ||||| ||||| ||||| ||| Sbjct 3965824 TCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 3965765 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283 ||||| ||||||| ||| ||||| ||||||||||| || ||||| || || ||||| || Sbjct 3965764 AGCCAGAATATTGACGCAAAAGAACCAGAAAAGAAGATTCCTTCAACTGCTGCAAAGGC 3965706 Score = 102 bits (112), Expect = 1e-16 Identities = 110/144 (76%), Gaps = 4/144 (3%) Strand=Plus/Minus Query 47790 GTTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCC 47845 |||| |||| ||||| |||| || | ||| ||| ||| | || ||||| ||||| Sbjct 3966823 GTTCATTTAGAAGTCCGCATCCAAGGTGAAAGAATTCTCTGTTGGACTCGACATCACTCC 3966764 Query 47846 CATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATAT 47905 ||| || ||||| || || || || ||||| || || ||||| || ||||||| ||| || Sbjct 3966763 CATCTTCTGATACTCGCCTACGCGCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAAT 3966704 Query 47906 ATTTTCCATAAAATCAAATGGATT 47929 ||| |||||||||||||| ||||| Sbjct 3966703 ATTCTCCATAAAATCAAACGGATT 3966680 >seq28 Length=22341012 Score = 113 bits (124), Expect = 6e-20 Identities = 180/256 (70%), Gaps = 7/256 (3%) Strand=Plus/Plus Query 45876 TCCAGTGGATCCAAATCCTTGAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCCTT 45935 |||||| || ||||| |||| | | |||||||| |||||| | ||| ||||||| Sbjct 17268572 TCCAGTAGAACCAAAACCTTCTGAACCCCTTTCAGTGTCATCTAAAACTTGAACTTCCTC 17268631 Query 45936 CAGATCAGGAT--AATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATTT 45993 | || |||| || | || | || | | || | || | || | ||||| | | ||| Sbjct 17268632 GATTTCTGGATTAAAAACATCCATTCACAAATAAACTG--CAATCCGATCACTCTTTTTT 17268689 Query 45994 ATTTCAAATATATCTTTTCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATCT 46053 | ||||||| | ||||| ||| ||| | ||| ||||| ||||| | ||||| |||||| Sbjct 17268690 ACTTCAAATTTTTCTTTGCCAAAATTAAACAGTATGACACCAATGTTTCCTCTGTAATCT 17268749 Query 46054 TCATCTATTACTCCCCCTCCCACATC---GATACCTTTTAGAGACAGTCCAGATCTAGGA 46110 |||||||| || || | | ||||| || | |||| || || ||||| | ||| Sbjct 17268750 TCATCTATCACACCAGTTACTACATCTATGAAATGTTTTGCAGCCAAGCCAGAACGTGGA 17268809 Query 46111 GCTATTCTTCCATAAC 46126 |||| ||||||||||| Sbjct 17268810 GCTACTCTTCCATAAC 17268825 >seq16 Length=30800738 Score = 107 bits (118), Expect = 3e-18 Identities = 148/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 45876 TCCAGTGGATCCAAATCCT--TGAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCC 45933 |||||| || ||||| ||| ||| | | |||||||| |||| | | ||| |||||| Sbjct 11695194 TCCAGTAGAACCAAAACCTCCTGAAC--CCCTTTCAGTGTCATCCAAAATTTGAACTTCC 11695251 Query 45934 TTCAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATTT 45993 | | | |||||| | || |||| | | || || || || || | ||||||| | ||| Sbjct 11695252 TCTAATACTGGATAAAAAATCCGTTCACAAATAAGCTGTGCAATCCGATCACCCTTTTTT 11695311 Query 45994 ATTTCAAATATATCTTTTCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATCT 46053 | ||||||| | ||||| ||| ||| | || ||||| |||| | ||||| |||||| Sbjct 11695312 ACTTCAAATTTTTCTTTGCCAAAATTAAATAGTATGACACCAACATTTCCTCTGTAATCT 11695371 Query 46054 TCATCTATTACTCCCCCTCCCACAT 46078 |||||||| || || |||| |||| Sbjct 11695372 TCATCTATCACACCAACTCCTACAT 11695396 >seq20 Length=28179453 Score = 104 bits (114), Expect = 3e-17 Identities = 234/341 (69%), Gaps = 13/341 (4%) Strand=Plus/Minus Query 45876 TCCAGTGGATCCAAATCCT--TGAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCC 45933 |||||| | ||||| ||| ||| | || |||||||| |||| | | ||| |||||| Sbjct 27297457 TCCAGTAAAACCAAAACCTCCTGAAC-TC-CTTTCAGTGTCATCCAAAACTTGAACTTCC 27297400 Query 45934 TTCAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATTT 45993 | | || ||||| | || |||| | | || || || || || | ||||||| | ||| Sbjct 27297399 TCTATTTCTTGATAACAAATCCGTTCACAAATAAGCTGTGCAATCCGATCACCCATTTTT 27297340 Query 45994 ATTTCAAATATAT-CTTTTCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATC 46052 | ||||| | | | |||| ||| ||| | ||| | ||| |||| | ||| ||||| Sbjct 27297339 ACTTCAATTTTTTTCTTTGCCAAAATTAAACAGTAGGACACCAACATTTTCTCCGTAATC 27297280 Query 46053 TTCATCTATTACTCCCCCTCCCACATC---GATACCTTTTAGAGACAGTCCAGATCTAGG 46109 ||||||||| || || |||| ||||| || | |||| || || ||||| | || Sbjct 27297279 TTCATCTATCACACCAACTCCTACATCTATGAAATGTTTTGCAGCCAAGCCAGAACGTGG 27297220 Query 46110 AGCTATTCTTCCATAACAGAATTTGGGCATAGACATCCGAATATCTGTTTTAATCAATCT 46169 ||||| |||| ||||||| || | | ||| |||| |||||||| | ||| Sbjct 27297219 AGCTACTCTT-CATAACATCCAAAAGGAAGGGCTATCTGAATGTCTGTTTTCA-CAA-GG 27297163 Query 46170 CCTTTCTCCA--GGAGGGATAGTATAGTCGTACGCACTGTA 46208 ||| ||||| || ||| ||||| || || |||||||| Sbjct 27297162 GCTTGCTCCATGGGTGGGCCTGTATAATCATAAGCACTGTA 27297122 >seq9 Length=36036951 Score = 104 bits (114), Expect = 3e-17 Identities = 179/256 (70%), Gaps = 8/256 (3%) Strand=Plus/Plus Query 45876 TCCAGTGGATCCAAATCCT--TGAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCC 45933 ||||| || ||||| ||| ||| | | |||||||| |||| ||| ||| |||||| Sbjct 25681852 TCCAGCAGAACCAAAACCTCCTGAAC--CCCTTTCAGTGTCATCCAGAACTTGAACTTCC 25681909 Query 45934 TTCAGATCAGGAT-AATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATT 45992 | | || |||| || | || |||| | | | || || || || | ||||||| | || Sbjct 25681910 TCTATTTCTGGATTAAAAAATCCGTTCACAATTAAGCTGTGCAATCCGATCACCCTTTTT 25681969 Query 45993 TATTTCAAATATATCTTTTCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATC 46052 || |||||| ||||| || ||| | ||| ||||| |||| | ||||| ||||| Sbjct 25681970 TACTTCAAAGTGTTCTTTGTCAAGATTAAACAGTATGACACCAACGTTTCCTCTGTAATC 25682029 Query 46053 TTCATCTATTACTCCCCCTCCCACATC---GATACCTTTTAGAGACAGTCCAGATCTAGG 46109 ||||||||| | || || | ||||| || | |||| || || ||||| | || Sbjct 25682030 TTCATCTATCATACCAGCTTCTACATCTATGAAATGTTTTTCAGCCAAGCCAGAACGTGG 25682089 Query 46110 AGCTATTCTTCCATAA 46125 ||||| |||||||||| Sbjct 25682090 AGCTACTCTTCCATAA 25682105 >seq202 Length=5697000 Score = 102 bits (112), Expect = 1e-16 Identities = 95/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 48163 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTT 48222 |||||||||| || || | ||| || ||||| ||||| || ||||| || || | || | Sbjct 3890749 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCAGGCATAAGGCCTCTCTTCT 3890690 Query 48223 TGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATG 48282 | ||||| || || || || ||||||||||| ||||| || |||||||| |||||||| | Sbjct 3890689 TCAGCCAGAAAATCGCAGCAAAAGATCCAGAGAAGAAAATTCCTTCTACAGCCGCAAAGG 3890630 Query 48283 C 48283 | Sbjct 3890629 C 3890629 Score = 95.1 bits (104), Expect = 2e-14 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 48637 CTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCAC 48696 |||| ||||| |||||||||| ||||||| ||||| ||||||||| ||||| ||||| Sbjct 3875708 CTACCTCTTCCACTGTCCAAAAGGATGCCTGTGCTTGTTTATACATCTTCCAAATATCCG 3875649 Query 48697 TGTATTGGATTGGGAAAATAACAAATC 48723 ||| ||||||||||| || ||||||| Sbjct 3875648 GGTACTGGATTGGGAAGATGACAAATC 3875622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694592664299520