Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxodonta_20africana_20[refseq_20GCF_5F000001905.1_202009-07-15] 2,352 sequences; 3,196,738,102 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq85 102 7e-17 >seq85 Length=6926877 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | || ||||| || || |||||||| || || ||| || ||| || Sbjct 1866282 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAAAGTACGTCCATCTTCC 1866223 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 |||||||| || || |||| || | |||||| || ||||| ||||||||||||||| Sbjct 1866222 AGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCCTCCTTGTCTTGG 1866163 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || ||| || || | || | |||||| || ||| || || | ||| | || || Sbjct 1866162 ATCTTTGCCTTGACATTCTCAATGGTGTCGCTGGGCTCTACTTCAAGGGTAATGGTCTTA 1866103 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||| || || || || |||||||| Sbjct 1866102 CCGGTCAAGGTCTTCACGAAGATCTGCAT 1866074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433817964251584