Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxodonta_20africana_20[refseq_20GCF_5F000001905.1_202009-07-15] 2,352 sequences; 3,196,738,102 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq85 89.7 4e-13 >seq85 Length=6926877 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960 |||| || | |||| |||||| || | ||||| || |||| |||||| |||| ||| Sbjct 1866054 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGTCCGTCTTCC 1865995 Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020 | ||||| |||||||| |||| | ||| || || | || | ||||| || || | Sbjct 1865994 AGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGG 1865935 Query 43021 ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTT 43080 ||| | ||||| | | | ||||| | | ||| || || | || || ||||| Sbjct 1865934 ATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCTACCTCAAGGGTGATGGTTTTA 1865875 Query 43081 CCGGTTAGAGTTTTCACAAAAATTTGCATTTTCT 43114 || |||| ||||||||||| || |||||| ||| Sbjct 1865874 CCCGTTAAGGTTTTCACAAAGATCTGCATTGTCT 1865841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381358668040416