Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxodonta_20africana_20[refseq_20GCF_5F000001905.1_202009-07-15] 2,352 sequences; 3,196,738,102 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq14 118 9e-22 >seq14 Length=62548349 Score = 118 bits (130), Expect = 9e-22 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230 || |||||||| |||| |||||||| |||| ||||| || | ||| ||||| ||||| Sbjct 11959787 GGCTGCCAAGCCTTGTCAGAGATGATCAAGTTTTACCTGGAGGTGGTGATGCCGCAGGCT 11959728 Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290 ||||| ||||| |||||||| || || || || ||||||||||| |||||||||| ||| Sbjct 11959727 GAAAACCACGGCCCCGACATCAAGGAGCATGTGAATTCCCTGGGGGAAAAGCTGACGACC 11959668 Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313 | || | | ||||| ||||| Sbjct 11959667 CTCAGGATCAGGCTGCGGCGCTG 11959645 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 127379 AGCTTCAGGAAAGAGGCGTGTACAAGGCCATGAGTGAGTTTGACATATTCATCAACTACA 127438 |||| || || | ||| || |||||||||||||||||||||||||| ||||||||||||| Sbjct 11957441 AGCTCCAAGAGAAAGGTGTCTACAAGGCCATGAGTGAGTTTGACATCTTCATCAACTACA 11957382 Query 127439 TCGAGACTTACATG 127452 | || | |||||| Sbjct 11957381 TAGAATCCTACATG 11957368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430042072490624