Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxodonta_20africana_20[refseq_20GCF_5F000001905.1_202009-07-15] 2,352 sequences; 3,196,738,102 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq21 95.1 1e-14 >seq21 Length=46401353 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 93353 GAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATT 93412 |||||| ||||| || || || | ||| ||||||||||||||| | || ||||| Sbjct 19705637 GAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATG 19705578 Query 93413 GCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTC 93472 ||||||||||| || |||||||| | ||||| || ||||| |||||||| ||||| | Sbjct 19705577 GCAATTTGGAAGCCATAGAAACAGCGGGCTTCGGTAATCTGAACTTCTTGGCTAAATCGC 19705518 Query 93473 TCTAC 93477 || || Sbjct 19705517 TCCAC 19705513 Score = 91.5 bits (100), Expect = 2e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193 |||||| ||| || | || || | | |||||||||||||||||| ||||| || ||| Sbjct 19708505 TCATTGGAGAACGTGAGGCCAGGCATTAATCCTCGTTTCTTGAGCCAGAATATCGATGCA 19708446 Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTC 93246 ||| ||||||||| || || ||||| || |||||||| || |||| ||| || Sbjct 19708445 AAAGAACCAGAAAAGAAGATCCCTTCTACTGCTGCAAAGGCTACAACACGCTC 19708393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556844428292480