Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxodonta_20africana_20[refseq_20GCF_5F000001905.1_202009-07-15] 2,352 sequences; 3,196,738,102 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq5 109 5e-19 >seq5 Length=100893473 Score = 109 bits (120), Expect = 5e-19 Identities = 114/150 (76%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 20249 TGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCC 20308 || || | ||| || || | ||||| |||||||| ||||| ||||| || |||| ||| Sbjct 90679552 TGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAAGGCACCCCCAGGCCC 90679611 Query 20309 ATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGA 20368 |||||||| |||||||| |||||||| ||||| ||||| |||| | || || || || Sbjct 90679612 ATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCGCCGTTCACCACGTAGAACTGG 90679671 Query 20369 CATAACAAGTGACAGGGCGGAAGCGCCATC 20398 || | ||| ||||| || ||||||||| Sbjct 90679672 CAAAGGGCGTGGCAGGGAGGCAGCGCCATC 90679701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441359823639680