Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxodonta_20africana_20[refseq_20GCF_5F000001905.1_202009-07-15] 2,352 sequences; 3,196,738,102 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq85 82.4 6e-11 >seq85 Length=6926877 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 |||||| || ||||| ||||| ||||| || |||||||| ||| | || ||||| Sbjct 1865845 AATGCAGATCTTTGTGAAAACCTTAACGGGTAAAACCATCACCCTTGAGGTAGAGCCCAG 1865904 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || ||| | || || ||||| ||||| |||||| | || || || Sbjct 1865905 TGACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCA 1865964 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || || || || | ||| || ||||||||||| || | | || || | || ||||| Sbjct 1865965 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAAGACGGACGTACCCTGTCTGACTACAA 1866024 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 ||| || || || || || ||||| |||| | | ||| ||||||||| Sbjct 1866025 CATCCAGAAGGAGTCCACTCTGCACCTGGTTCTCCGTCTGAGAGGGGGAA 1866074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412829765895536