Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxodonta_20africana_20[refseq_20GCF_5F000001905.1_202009-07-15] 2,352 sequences; 3,196,738,102 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq80 87.8 2e-12 >seq80 Length=8685383 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/140 (74%), Gaps = 6/140 (4%) Strand=Plus/Minus Query 131042 CTAGCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAATTTGTTTATT---TAATTGTTTC 131098 || |||||||| ||||| |||||||||||||| |||||| ||||| ||||||| | Sbjct 8331293 CTGGCTTCCAAGGCTCCATAATAAATGGTTTCAAAAATTTGCTTATTCAATAATTGTGCC 8331234 Query 131099 GCTTGGTTGCTCTCGTAAGGAAATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATC 131158 || | ||||| ||||| | |||| | |||||||| ||||| ||||| |||| | Sbjct 8331233 TCTGG---ACTCTCAAAAGGATACCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACC 8331177 Query 131159 CCAACGCCCACCGGTCTATG 131178 |||| || || || | ||| Sbjct 8331176 CCAATTCCAACGGGGCGATG 8331157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424922219255424