Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxodonta_20africana_20[refseq_20GCF_5F000001905.1_202009-07-15] 2,352 sequences; 3,196,738,102 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq5 89.7 4e-13 >seq5 Length=100893473 Score = 89.7 bits (98), Expect = 4e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 || ||||||||||| |||||||| ||||| || ||| || || ||||| || ||||| Sbjct 90679543 CCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAAGGCACC 90679602 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACA 111897 || |||||||| ||||| || || || || ||||| || || || | | ||| Sbjct 90679603 CCCAGGCCCATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCGCCGTTCACCACG 90679662 Query 111898 TAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936 || || || ||||| | || || ||||||| |||||| Sbjct 90679663 TAGAACTGGCAAAGGGCGTGGCAGGGAGGCAGCGCCATC 90679701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391934364879376