Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orycteropus_20afer_20afer_20[refseq_20GCF_5F000298275.1_202012-09- 20] 22,509 sequences; 4,444,080,527 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq30 98.7 8e-16 >seq30 Length=19208098 Score = 98.7 bits (108), Expect = 8e-16 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031 |||| ||| ||||| || || | | || ||||| || || | |||||||| | ||| Sbjct 15109434 ATGGCACTGCCTCCCTGCCATGCCCTTTGCCAGTTCTATGTGGTGAACGGTGAGCTGTCC 15109493 Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091 ||||| | |||||||| || || ||||||||||| ||||| || |||||||| || | Sbjct 15109494 TGCCAGCTGTACCAGAGGTCAGGAGATATGGGCCTGGGGGTGCCTTTCAACATCGCCAGC 15109553 Query 19092 TATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAA 19135 || || || || |||||||| | || || | ||||| || || Sbjct 15109554 TACGCCCTGCTCACCTACATGATCGCACACATCACAGGCCTGAA 15109597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399394404691905