Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orycteropus_20afer_20afer_20[refseq_20GCF_5F000298275.1_202012-09- 20] 22,509 sequences; 4,444,080,527 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq311 318 7e-82 seq30 174 2e-38 seq13 134 2e-26 >seq311 Length=4283029 Score = 318 bits (352), Expect = 7e-82 Identities = 608/884 (69%), Gaps = 15/884 (2%) Strand=Plus/Plus Query 9478 CTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTC 9537 |||||| || ||||| | |||| | ||||||||| | ||||| | | || || Sbjct 1349412 CTGTATTCTCTGGTGTTCATTGTTGGCCTTTTGGGCAATGTGGTAGTGATAGTGATCCTC 1349471 Query 9538 ATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCT 9597 | || ||||| || | ||| || | || ||||| | ||| | |||||||| || ||| Sbjct 1349472 ACAAAATACAAGAGGCTCAGAATTATGACCAACATCTACCTGCTCAACTTGGCGATTTCT 1349531 Query 9598 GACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTATCATGAT 9657 |||||||| ||||| || || | ||||| ||||| |||||| ||||| || | || | Sbjct 1349532 GACTTGCTCTTTCTGTTCACGCTTCCATTCTGGATTCACTATGTTGGA-TGGAACAAG-- 1349588 Query 9658 TGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTAC 9717 |||| |||||| | | ||||||| | |||| || | | |||||| ||||| Sbjct 1349589 TGGATTTTTGGCCACTGCATGTGTAAGTTCCTCACAGGGCTTTATTACATAGGCTTGTAC 1349648 Query 9718 AGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCT 9777 ||| || |||||| |||||||||||| || | |||||||| | || ||||| | ||| Sbjct 1349649 AGCGAGATCTTTTTCATCATCCTGCTGACGATTGACAGGTACTTGGCCATTGTCCACGCT 1349708 Query 9778 GTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGTACCTGG 9837 || | | ||||| | || || |||| ||| || | ||| | | | |||||| Sbjct 1349709 GTGTTTTCCCTGAGGACCCGGACTGTCACCTTTGGTATTATAACCAGCATCTTCACCTGG 1349768 Query 9838 TTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAGATGACAAT 9897 ||||||||| | | |||||||| ||| |||| |||| ||||| || | Sbjct 1349769 GCCCTGGCAGGGCTAGCAGCTCTCCCTGAGTTTATCTTCCATGAGTTTCAAGAGGATGTT 1349828 Query 9898 GGTAGGGTTCAGTGTGAT--CCTTACTACCCAGA-GATGTCTACAAATGTTTGGAGGCGC 9954 | | || || || ||| ||||||| || ||| | | || |||| ||| Sbjct 1349829 G--AACAATCTGTCTGCAGCCCTCACTACCCGGAAGATAATGA-AGATACCTGGAAGCGT 1349885 Query 9955 GCCCACGTTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTC 10014 ||| | | || ||| ||| || |||| |||| ||||| ||||||||||| || Sbjct 1349886 TTCCATGCTTTAAGAATGAATATTTTGGGTCTTGTTTTCCCTCTAATCATTATGGCTATC 1349945 Query 10015 TGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCC 10074 ||||||| | ||| || | | ||| |||| ||| | | | || ||||||||| Sbjct 1349946 TGCTACTCAGGAATCATTAAAGCGCTGCTGAGATGCCGTGATAGGCAAAAATACAAGGCC 1350005 Query 10075 ATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACAACATT 10134 ||| |||||| |||||||||||| ||| || ||| |||| ||||||||||||||| | Sbjct 1350006 ATCCAGCTCATTTTTGTCATCATGATGGTCTTTTTCCTTTTCTGGACACCCTACAACCTG 1350065 Query 10135 GTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTT--AACCTGCAGTGTGCATTGAGCA 10192 |||||||| || ||| | ||||| || | ||||| | | | | ||| ||| ||||| Sbjct 1350066 GTTCTCCTTCTTTCTGCTTTTCAAGCGATCCTTCCTGAGAACAACTGTGAGCA--GAGCA 1350123 Query 10193 GTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTGCATCA 10252 | ||||| |||| || ||||| || |||||||||||||||| || ||| Sbjct 1350124 AACAGCTGGACCTGGCCTTGGCAATAACGGAAGTGATAGCCTACACACACTGCTGTGTCA 1350183 Query 10253 ACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTT-TAGAAGACACCTGTACCACTTCTTC 10311 |||| | ||||| || || || || |||| ||| |||| | |||| ||||||| ||| Sbjct 1350184 ACCCCATCATCTATGCCTTTGTTGGTGAGAGGTTCCAGAA-ATACCTCCACCACTTTTTC 1350242 Query 10312 CACACCTACGTGGCCATCTACCTCTGCAAGTACATCCCCTTCCT 10355 |||| || |||| |||||| || |||| ||| | || ||||| Sbjct 1350243 CACAGGTATGTGGGCATCTATCTGAGCAAATACCTTCCATTCCT 1350286 Score = 318 bits (352), Expect = 7e-82 Identities = 608/884 (69%), Gaps = 15/884 (2%) Strand=Plus/Plus Query 176364 CTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTC 176423 |||||| || ||||| | |||| | ||||||||| | ||||| | | || || Sbjct 1349412 CTGTATTCTCTGGTGTTCATTGTTGGCCTTTTGGGCAATGTGGTAGTGATAGTGATCCTC 1349471 Query 176424 ATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCT 176483 | || ||||| || | ||| || | || ||||| | ||| | |||||||| || ||| Sbjct 1349472 ACAAAATACAAGAGGCTCAGAATTATGACCAACATCTACCTGCTCAACTTGGCGATTTCT 1349531 Query 176484 GACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTATCATGAT 176543 |||||||| ||||| || || | ||||| ||||| |||||| ||||| || | || | Sbjct 1349532 GACTTGCTCTTTCTGTTCACGCTTCCATTCTGGATTCACTATGTTGGA-TGGAACAAG-- 1349588 Query 176544 TGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTAC 176603 |||| |||||| | | ||||||| | |||| || | | |||||| ||||| Sbjct 1349589 TGGATTTTTGGCCACTGCATGTGTAAGTTCCTCACAGGGCTTTATTACATAGGCTTGTAC 1349648 Query 176604 AGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCT 176663 ||| || |||||| |||||||||||| || | |||||||| | || ||||| | ||| Sbjct 1349649 AGCGAGATCTTTTTCATCATCCTGCTGACGATTGACAGGTACTTGGCCATTGTCCACGCT 1349708 Query 176664 GTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGTACCTGG 176723 || | | ||||| | || || |||| ||| || | ||| | | | |||||| Sbjct 1349709 GTGTTTTCCCTGAGGACCCGGACTGTCACCTTTGGTATTATAACCAGCATCTTCACCTGG 1349768 Query 176724 TTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAGATGACAAT 176783 ||||||||| | | |||||||| ||| |||| |||| ||||| || | Sbjct 1349769 GCCCTGGCAGGGCTAGCAGCTCTCCCTGAGTTTATCTTCCATGAGTTTCAAGAGGATGTT 1349828 Query 176784 GGTAGGGTTCAGTGTGAT--CCTTACTACCCAGA-GATGTCTACAAATGTTTGGAGGCGC 176840 | | || || || ||| ||||||| || ||| | | || |||| ||| Sbjct 1349829 G--AACAATCTGTCTGCAGCCCTCACTACCCGGAAGATAATGA-AGATACCTGGAAGCGT 1349885 Query 176841 GCCCACGTTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTC 176900 ||| | | || ||| ||| || |||| |||| ||||| ||||||||||| || Sbjct 1349886 TTCCATGCTTTAAGAATGAATATTTTGGGTCTTGTTTTCCCTCTAATCATTATGGCTATC 1349945 Query 176901 TGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCC 176960 ||||||| | ||| || | | ||| |||| ||| | | | || ||||||||| Sbjct 1349946 TGCTACTCAGGAATCATTAAAGCGCTGCTGAGATGCCGTGATAGGCAAAAATACAAGGCC 1350005 Query 176961 ATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACAACATT 177020 ||| |||||| |||||||||||| ||| || ||| |||| ||||||||||||||| | Sbjct 1350006 ATCCAGCTCATTTTTGTCATCATGATGGTCTTTTTCCTTTTCTGGACACCCTACAACCTG 1350065 Query 177021 GTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTT--AACCTGCAGTGTGCATTGAGCA 177078 |||||||| || ||| | ||||| || | ||||| | | | | ||| ||| ||||| Sbjct 1350066 GTTCTCCTTCTTTCTGCTTTTCAAGCGATCCTTCCTGAGAACAACTGTGAGCA--GAGCA 1350123 Query 177079 GTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTGCATCA 177138 | ||||| |||| || ||||| || |||||||||||||||| || ||| Sbjct 1350124 AACAGCTGGACCTGGCCTTGGCAATAACGGAAGTGATAGCCTACACACACTGCTGTGTCA 1350183 Query 177139 ACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTT-TAGAAGACACCTGTACCACTTCTTC 177197 |||| | ||||| || || || || |||| ||| |||| | |||| ||||||| ||| Sbjct 1350184 ACCCCATCATCTATGCCTTTGTTGGTGAGAGGTTCCAGAA-ATACCTCCACCACTTTTTC 1350242 Query 177198 CACACCTACGTGGCCATCTACCTCTGCAAGTACATCCCCTTCCT 177241 |||| || |||| |||||| || |||| ||| | || ||||| Sbjct 1350243 CACAGGTATGTGGGCATCTATCTGAGCAAATACCTTCCATTCCT 1350286 Score = 120 bits (132), Expect = 4e-22 Identities = 540/846 (64%), Gaps = 21/846 (2%) Strand=Plus/Minus Query 176365 TGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCA 176424 ||||| || |||||| || |||| || | ||||| ||| ||||||| | | ||| Sbjct 1222673 TGTATTCCCTGGTGTTTGTCATTGGCCTGGTTGGCAACATCCTAGTGGTCTTGCTCTTCA 1222614 Query 176425 TAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTG 176484 | ||| | || | |||||| | | || | || | || | ||| |||| || |||| Sbjct 1222613 TGCAATATAAGAGGCTCAAAAGCATGACCAGTATCTACCTCCTCAACCTGGCCATTTCTG 1222554 Query 176485 ACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTATCATGATT 176544 || || | || |||| || |||| |||||||| |||| | || | || | | Sbjct 1222553 ACCTGGTCTTCCTTTCCACGCTGCCCTTTTGGATTGACTACAAACTAAAGGATAAC---T 1222497 Query 176545 GGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACA 176604 ||| ||||||| | | |||| ||| | ||| || | | |||||| |||||| Sbjct 1222496 GGATTTTTGGTGATGTCATGTGCAAATTCCTCTCAGGGTTTTATTACATAGGCTTGTACA 1222437 Query 176605 GCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTG 176664 || || |||||| ||||||||| || || | |||||||| || || |||| |||||| Sbjct 1222436 GCGAGATCTTTTTCATCATCCTACTGACGTTCGACAGGTACCTGGCCATTGTTCATGCTG 1222377 Query 176665 TAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGTA-CCTGG 176723 || ||| || || |||| | |||| ||| || | | | || | ||| ||||| Sbjct 1222376 TATTTGCCCTGCGGGCCCGAACCATCACCTTTGGTATCATAAGCAGTAT-TGTCGCCTGG 1222318 Query 176724 TTTCTGGCAGGGTTGTTGTCCCTCCCTGAAT-----TTTTCTTTCATGGACACCAAGATG 176778 ||||| ||| ||| |||| | | ||||| || || | ||| | Sbjct 1222317 GCCCTGGCCATCTTGGCATCCATCCCAGGCTGGCAATTTTC---CAAGGCC--CAATTAG 1222263 Query 176779 ACAATGGTAGGGTTCAGTGTGATCCTT-ACTACCCAGA--GATGTCTACAAATGTTTGGA 176835 | | || |||| | |||| ||| ||| | || | ||| || || ||| Sbjct 1222262 AGATCAGTCAT-TTCACCTGCAGCCTTCACTTCCCTCATGGAAGCCTAAAAGGGT--GGA 1222206 Query 176836 GGCGCGCCCACGTTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGG 176895 | ||| | | || ||| || || | || ||||||||||| | ||||| Sbjct 1222205 AACAATTCCAGGCTCTGAAACTGAACATTTTGGGGCTGGTTTTGCCTCTGTTGGTTATGA 1222146 Query 176896 CTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACA 176955 | ||||||||| | |||||| | | ||| | || | || | |||||||| || Sbjct 1222145 TTATCTGCTACTCAGGAATTATAAAGATTCTGCTTAGAAGACCAAATGAGAAGAAGGCCA 1222086 Query 176956 AGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACA 177015 | || || | || || |||||||||||| | || ||| | |||||||| ||||| | Sbjct 1222085 AAGCAGTCCGCCTGATTTTTGTCATCATGATCATCTTCTTTCTCTTTTGGACCCCCTATA 1222026 Query 177016 ACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTTAACCTGCAGTGTGCATTGA 177075 | | | | | || | ||| | || || | | ||| ||| | |||||| || Sbjct 1222025 CCCTGGCTATGTTAGTCTCTGCTTTCCAAGACTCTCTTTTTACCAATGAGTGTGAGCAGA 1221966 Query 177076 GCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTGCA 177135 ||| | ||||| |||| | | | ||| | ||| | ||| ||||||||| |||| Sbjct 1221965 GCAAACAGCTGGACCTGGCCATACAAGTGACAGAGACAATCTCCTTCACACACTGCTGCA 1221906 Query 177136 TCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAGAAGACACCTGTACCACTTCT 177195 ||||||| | ||||||| ||||| || ||| ||| || || | || | || || | Sbjct 1221905 TCAACCCCATCATCTACGTCTTCGTTGGTGAGCGGTTCAGGAGGTATCTCCATCAGTTGT 1221846 Query 177196 TCCACA 177201 |||||| Sbjct 1221845 TCCACA 1221840 Score = 120 bits (132), Expect = 4e-22 Identities = 540/846 (64%), Gaps = 21/846 (2%) Strand=Plus/Minus Query 9479 TGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCA 9538 ||||| || |||||| || |||| || | ||||| ||| ||||||| | | ||| Sbjct 1222673 TGTATTCCCTGGTGTTTGTCATTGGCCTGGTTGGCAACATCCTAGTGGTCTTGCTCTTCA 1222614 Query 9539 TAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTG 9598 | ||| | || | |||||| | | || | || | || | ||| |||| || |||| Sbjct 1222613 TGCAATATAAGAGGCTCAAAAGCATGACCAGTATCTACCTCCTCAACCTGGCCATTTCTG 1222554 Query 9599 ACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTATCATGATT 9658 || || | || |||| || |||| |||||||| |||| | || | || | | Sbjct 1222553 ACCTGGTCTTCCTTTCCACGCTGCCCTTTTGGATTGACTACAAACTAAAGGATAAC---T 1222497 Query 9659 GGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACA 9718 ||| ||||||| | | |||| ||| | ||| || | | |||||| |||||| Sbjct 1222496 GGATTTTTGGTGATGTCATGTGCAAATTCCTCTCAGGGTTTTATTACATAGGCTTGTACA 1222437 Query 9719 GCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTG 9778 || || |||||| ||||||||| || || | |||||||| || || |||| |||||| Sbjct 1222436 GCGAGATCTTTTTCATCATCCTACTGACGTTCGACAGGTACCTGGCCATTGTTCATGCTG 1222377 Query 9779 TAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGTA-CCTGG 9837 || ||| || || |||| | |||| ||| || | | | || | ||| ||||| Sbjct 1222376 TATTTGCCCTGCGGGCCCGAACCATCACCTTTGGTATCATAAGCAGTAT-TGTCGCCTGG 1222318 Query 9838 TTTCTGGCAGGGTTGTTGTCCCTCCCTGAAT-----TTTTCTTTCATGGACACCAAGATG 9892 ||||| ||| ||| |||| | | ||||| || || | ||| | Sbjct 1222317 GCCCTGGCCATCTTGGCATCCATCCCAGGCTGGCAATTTTC---CAAGGCC--CAATTAG 1222263 Query 9893 ACAATGGTAGGGTTCAGTGTGATCCTT-ACTACCCAGA--GATGTCTACAAATGTTTGGA 9949 | | || |||| | |||| ||| ||| | || | ||| || || ||| Sbjct 1222262 AGATCAGTCAT-TTCACCTGCAGCCTTCACTTCCCTCATGGAAGCCTAAAAGGGT--GGA 1222206 Query 9950 GGCGCGCCCACGTTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGG 10009 | ||| | | || ||| || || | || ||||||||||| | ||||| Sbjct 1222205 AACAATTCCAGGCTCTGAAACTGAACATTTTGGGGCTGGTTTTGCCTCTGTTGGTTATGA 1222146 Query 10010 CTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACA 10069 | ||||||||| | |||||| | | ||| | || | || | |||||||| || Sbjct 1222145 TTATCTGCTACTCAGGAATTATAAAGATTCTGCTTAGAAGACCAAATGAGAAGAAGGCCA 1222086 Query 10070 AGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACA 10129 | || || | || || |||||||||||| | || ||| | |||||||| ||||| | Sbjct 1222085 AAGCAGTCCGCCTGATTTTTGTCATCATGATCATCTTCTTTCTCTTTTGGACCCCCTATA 1222026 Query 10130 ACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTTAACCTGCAGTGTGCATTGA 10189 | | | | | || | ||| | || || | | ||| ||| | |||||| || Sbjct 1222025 CCCTGGCTATGTTAGTCTCTGCTTTCCAAGACTCTCTTTTTACCAATGAGTGTGAGCAGA 1221966 Query 10190 GCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTGCA 10249 ||| | ||||| |||| | | | ||| | ||| | ||| ||||||||| |||| Sbjct 1221965 GCAAACAGCTGGACCTGGCCATACAAGTGACAGAGACAATCTCCTTCACACACTGCTGCA 1221906 Query 10250 TCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAGAAGACACCTGTACCACTTCT 10309 ||||||| | ||||||| ||||| || ||| ||| || || | || | || || | Sbjct 1221905 TCAACCCCATCATCTACGTCTTCGTTGGTGAGCGGTTCAGGAGGTATCTCCATCAGTTGT 1221846 Query 10310 TCCACA 10315 |||||| Sbjct 1221845 TCCACA 1221840 Score = 102 bits (112), Expect = 1e-16 Identities = 166/238 (70%), Gaps = 16/238 (7%) Strand=Plus/Plus Query 10057 AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTT 10116 |||||||||||||||||| | || |||||||||| ||||||||| | ||||||| | || Sbjct 1487885 AAGAAGAAGTACAAGGCCGTGAGACTCATCTTTGCCATCATGGTTGTCTATTTTCTCTTC 1487944 Query 10117 TGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCT---TCTTAAC 10173 ||| | || |||||||| || || | ||| | ||||| || | | | ||| || Sbjct 1487945 TGGGCTCCTTACAACATCGTCCTTGTCCTGACCACCTTCCAGGAGTTCTTTGGTCTGGAC 1488004 Query 10174 --CTGCAGTGTGCATTGAGCAGTAAC---TTGGACATGGCTCTGCTGATAACAAAAACAG 10228 ||||||| ||| |||| ||||| || ||| | | ||| |||| Sbjct 1488005 AACTGCAGT--------AGCTCTAACAGGCTGGACCAAGCCATGCAGGTGACAGAAACTC 1488056 Query 10229 TAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTT 10286 | | | || ||||| ||||||||||| | ||||| || || || ||||||||||| Sbjct 1488057 TTGGCATGACGCACTGCTGCATCAACCCCATCATCTATGCCTTTGTCGGGGAGAAGTT 1488114 Score = 102 bits (112), Expect = 1e-16 Identities = 166/238 (70%), Gaps = 16/238 (7%) Strand=Plus/Plus Query 176943 AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTT 177002 |||||||||||||||||| | || |||||||||| ||||||||| | ||||||| | || Sbjct 1487885 AAGAAGAAGTACAAGGCCGTGAGACTCATCTTTGCCATCATGGTTGTCTATTTTCTCTTC 1487944 Query 177003 TGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCT---TCTTAAC 177059 ||| | || |||||||| || || | ||| | ||||| || | | | ||| || Sbjct 1487945 TGGGCTCCTTACAACATCGTCCTTGTCCTGACCACCTTCCAGGAGTTCTTTGGTCTGGAC 1488004 Query 177060 --CTGCAGTGTGCATTGAGCAGTAAC---TTGGACATGGCTCTGCTGATAACAAAAACAG 177114 ||||||| ||| |||| ||||| || ||| | | ||| |||| Sbjct 1488005 AACTGCAGT--------AGCTCTAACAGGCTGGACCAAGCCATGCAGGTGACAGAAACTC 1488056 Query 177115 TAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTT 177172 | | | || ||||| ||||||||||| | ||||| || || || ||||||||||| Sbjct 1488057 TTGGCATGACGCACTGCTGCATCAACCCCATCATCTATGCCTTTGTCGGGGAGAAGTT 1488114 >seq30 Length=19208098 Score = 174 bits (192), Expect = 2e-38 Identities = 135/161 (84%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 ||||| |||| ||| |||| ||||||||| ||||||| ||||||||| |||||||| ||| Sbjct 15109594 AGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAAGGC 15109535 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 |||||||| ||||| || || || | |||||||||||||||||| ||||| ||| | || Sbjct 15109534 ACCCCCAGGCCCATATCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 15109475 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 || ||||||||||| ||| |||||||| ||||| ||||| Sbjct 15109474 ACATAGAACTGGCAAAGGGCATGGCAGGGAGGCAGTGCCAT 15109434 >seq13 Length=23775791 Score = 134 bits (148), Expect = 2e-26 Identities = 120/148 (81%), Gaps = 3/148 (2%) Strand=Plus/Minus Query 138091 AGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCCTTTTCCTGG 138150 ||||| |||||||||| | ||||||||||||||||||||||| | ||||| || Sbjct 21044190 AGCCTTGTCCTGAGGGTTGTCAGCTTTTCCCCCAGGGAGTTCACATGCTCCTTGA--TGT 21044133 Query 138151 TCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACTGGATCATCTCA 138210 | || || |||||||| ||||| |||||||| |||||||||| |||| ||||||||| Sbjct 21044132 TTGGA-CTTTGGTTCTCAGCCTGTGGCATCACTACCTCCAGGTAGAACTTGATCATCTCT 21044074 Query 138211 GACAGGGCCTGGCAGCCCAGGTAACCCT 138238 |||| || ||||| ||||||||||||| Sbjct 21044073 GACAAAGCTTGGCAACCCAGGTAACCCT 21044046 Score = 125 bits (138), Expect = 8e-24 Identities = 91/104 (88%), Gaps = 1/104 (1%) Strand=Plus/Minus Query 137922 TCAGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACTC 137981 |||||||||| |||| | |||||||||| |||||||||||||||||||||||||| || Sbjct 21046367 TCAGTTTTTCCTCTTCATTGTCATGTAGGTTTCTATGTAGTTAATGAAGATGTCAAATTC 21046308 Query 137982 GCTCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT-TGCTGAAG 138024 ||||||||||||||||| ||||| || ||||||| ||| |||| Sbjct 21046307 ACTCATGGCCTTGTAGACACCTTTCTCTTGGAGCTGTGCAGAAG 21046264 Score = 91.5 bits (100), Expect = 2e-13 Identities = 123/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 138297 AAAGAAGGTCTTTACCCTGCTGAAGGCGGCCCTGAGCTCGTGGAGCATGTGGGGCAGGCT 138356 |||||| ||||| |||||| ||| || || | |||||| ||||||||||||||||||| Sbjct 21042875 AAAGAAAGTCTTCACCCTGTCGAAAGCCGCTCGGAGCTCTCGGAGCATGTGGGGCAGGCT 21042816 Query 138357 GGTGGGCAATGTAGG-GCAGTCGTCCCCAGACTCACTGTCATATTTGTTGTCGGCCCACA 138415 || | | ||||| |||| || | |||||| |||| | | | ||||| || Sbjct 21042815 -GTCTGAGAAGTAGGTGCAGCTGTTCTCAGACTGGGTGTCCTGGCTCCAGCTGGCCCCCA 21042757 Query 138416 CCCCGGCCAGGAGAACCAGGCAACACAGCAGCGATGCCCTGAACATGGC 138464 | || ||||||| ||||||||||| ||||| | || | | |||||| Sbjct 21042756 CACCAGCCAGGAAGACCAGGCAACATAGCAGTGCTGAGCGGGGCATGGC 21042708 Score = 82.4 bits (90), Expect = 9e-11 Identities = 108/147 (73%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 138301 AAGGTCTTTACCCTGCTGAAGGCGGCCCTGAGCTCGTGGAGCATGTGGGGCAGGCTGGTG 138360 || ||||| ||||| |||||| | |||| || ||| ||||||||||||| || |||| Sbjct 21266124 AAAGTCTTCACCCTACTGAAGACTGCCCAGAACTCTTGGAGCATGTGGGACAAGCTGTCT 21266183 Query 138361 GGCAATGTAGG-GCAGTCGTCCCCAGACTCACTGTCATATTTGTTGTCGGCCCACACCCC 138419 || || ||||| |||| || | |||||| || | | | | ||||| || || Sbjct 21266184 GGGAA-GTAGGTGCAGCTGTTCTCAGACTGGGTGCCCTGGCTCCGGCTGGCCCCTACACC 21266242 Query 138420 GGCCAGGAGAACCAGGCAACACAGCAG 138446 |||||||| ||||||||||| ||||| Sbjct 21266243 AGCCAGGAGGACCAGGCAACATAGCAG 21266269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589910774516360