Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orycteropus_20afer_20afer_20[refseq_20GCF_5F000298275.1_202012-09- 20] 22,509 sequences; 4,444,080,527 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq48 98.7 1e-15 >seq48 Length=15315231 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || || ||||| || |||||||| || || |||| | ||||| || ||||| || Sbjct 865965 GTGGACTCTTTCTGGATGTTGTAGTCCGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCC 865906 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| |||||| | ||||| || ||||| |||||||||||||| || ||| || Sbjct 865905 GCAAAGATCAACCTCTGCTGGTCAGGAGGGATGCCTTCTTTGTCTTGGATCTTTGCCTTG 865846 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | ||||| |||| |||||||||| || | ||||| |||||||| || Sbjct 865845 ACATTCTCAATGGTGTCACTGGGCTCTACTTCAAGGGTGATTGTCTTACCGGTCAAGGTC 865786 Query 143168 TTTACGAATATTTG 143181 || ||||| || || Sbjct 865785 TTCACGAAGATCTG 865772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506871745160880