Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orycteropus_20afer_20afer_20[refseq_20GCF_5F000298275.1_202012-09- 20] 22,509 sequences; 4,444,080,527 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq74 86.0 9e-12 >seq74 Length=12003515 Score = 86.0 bits (94), Expect = 9e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 97179 CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAG 97238 || ||| | |||||| | | ||||| |||||| || || || ||||| |||||||| Sbjct 11038393 CTTTGGTATGCCATCATTGAGTCTCAGACAGAGACAGGTACCCCATACATGCTCTACAAA 11038452 Query 97239 GATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTG 97298 ||| || ||||| || |||||||| | || |||| || ||||| || ||| ||| Sbjct 11038453 GATTCCTGTAATCGGAAGAGCAACCAGCAGAACCTGGGAACGATCAAATGCAGCAACCTG 11038512 Query 97299 TGCACGGAAATTGTAGAGTA 97318 ||||||||| | ||||| || Sbjct 11038513 TGCACGGAAGTAGTAGAATA 11038532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740850693730840