Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orycteropus_20afer_20afer_20[refseq_20GCF_5F000298275.1_202012-09- 20] 22,509 sequences; 4,444,080,527 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq21 93.3 8e-14 >seq21 Length=21368495 Score = 93.3 bits (102), Expect = 8e-14 Identities = 103/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 || || ||| |||| |||||| | || || || || || |||||||| || | || || Sbjct 10316962 GGGGAAAGGGTGGTTGCCTTTGCTGCTGTAGAAGGGATTTTCTTCTCTGGATCTTTTGCT 10317021 Query 42756 TCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814 |||| |||||||| ||| ||| |||| | ||||| |||||||| || || || ||||| Sbjct 10317022 GCCATATTCTGGCTAAAGAAGAGAGGTCTT-ATGCCTGGACTCACTTTTTCCAATGAACT 10317080 Query 42815 CATCAGCAGGGACGA 42829 ||||||||| || || Sbjct 10317081 CATCAGCAGAGATGA 10317095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944073498361840