Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orycteropus_20afer_20afer_20[refseq_20GCF_5F000298275.1_202012-09- 20] 22,509 sequences; 4,444,080,527 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq48 98.7 9e-16 >seq48 Length=15315231 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| || || ||||| || || ||||| ||| || |||||||| || Sbjct 866193 GTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCG 866134 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || ||||||| | |||||| || ||||| || || |||||||| ||| || |||| Sbjct 866133 GCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCTTGGATCTTTGCCTTG 866074 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | |||||| | ||| ||||| | ||| | || || || ||||| || Sbjct 866073 ACATTCTCAATGGTGTCACTGGGCTCTACTTCAAGGGTAATGGTCTTACCAGTCAGGGTC 866014 Query 127097 TTTACAAAAATCTGCAT 127113 || || ||||||||||| Sbjct 866013 TTCACGAAAATCTGCAT 865997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475367011906160