Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orycteropus_20afer_20afer_20[refseq_20GCF_5F000298275.1_202012-09- 20] 22,509 sequences; 4,444,080,527 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq14 192 5e-43 seq8 190 2e-42 seq294 168 5e-36 seq327 132 4e-25 seq420 131 1e-24 seq258 120 2e-21 seq245 113 4e-19 seq13 113 4e-19 seq202 111 1e-18 seq101 100 2e-15 seq139 98.7 8e-15 seq611 96.9 3e-14 >seq14 Length=23263016 Score = 192 bits (212), Expect = 5e-43 Identities = 450/669 (67%), Gaps = 20/669 (3%) Strand=Plus/Minus Query 551940 CTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTAT 551999 || || ||| | || ||| ||| |||||| | ||||| || | ||| ||||| | | Sbjct 17256442 CTGTCTTCTAGCACCCAAGCCAGTATTGAGATTGATTCTTTGTGTGAAGGAATCAACTTC 17256383 Query 552000 AATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACA 552059 |||| ||||| | | ||| |||||||||| | | |||| || || ||| Sbjct 17256382 TATACCTCTATTACCCGCGCCCAATTTGAAGAATTGAATGCTGACCTGTTCCATGGCACA 17256323 Query 552060 ATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAA 552119 | || || || || ||| | || ||| ||||| | || ||||| | | ||||| Sbjct 17256322 CTGGACCCTGTGGAGAAAGCCCTTAGGGATACAAAGCTAGACAAATCTCAGATCCATGAC 17256263 Query 552120 ATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAA--TGTT-AAGTTCT 552176 ||||| || || | ||| ||||| ||||| || |||| |||| | || ||| | | Sbjct 17256262 ATTGTCCTGGTGGATGGTTCTACCCATATTCCCAAGATTCA-GAAACTTCTTCAAGATTT 17256204 Query 552177 TATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGT 552236 |||||||| ||| |||| || | || | |||| ||||||||||| | |||||| Sbjct 17256203 C--TTCAATGGAAAAGAATTGAACAAGAGCATCGATCCCAATGAGGCTGTTACATATGGT 17256146 Query 552237 GCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTA 552296 || || | || |||||||| | |||||| | | |||||| | ||| || | | Sbjct 17256145 GCAGCTGTCCAGGCAGCTATCTTATCTGGAGACAGATCTGAAAATGTTCAAGATTTGCTG 17256086 Query 552297 CTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAAT 552356 ||| | ||||| |||||||| || |||||| | ||||| | ||| || | |||||| Sbjct 17256085 CTTTTGGATGTCACTCCTCTTTCCCTTGGTATTGAAACTGCTGGTGGAGTCATGACTGTC 17256026 Query 552357 CTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTA----TTTTCTACGTA 552412 ||||| | | ||||||||||||||| | ||| | || | || | || || Sbjct 17256025 CTTATTAAGTGCAATACTACTATTCCT----ACAAAGCAGATGCAGACCTTCACAACCTA 17255970 Query 552413 TTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAG--GAGAAAGAAAATTCACT 552470 || || || || ||| ||| ||||| ||| ||||| ||| | | | | || Sbjct 17255969 CTCTGACAACCAGCCTGGTGTACTCATTCAGGTTTATGAAGGTGAGCATGCCA--TGACC 17255912 Query 552471 AAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGA 552530 || ||||| || ||||| | ||| | | || || |||||||| || ||||| Sbjct 17255911 AAGGATAACAACTTGCTTGGCAAATTTGAACTCACTGGCATACCTCCTGCACCACGTGGT 17255852 Query 552531 GTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCT 552590 || || || |||||||| ||||| ||||| |||||||||||||| | ||||| ||| | Sbjct 17255851 GTCCCCCAGATTGAAGTCACTTTTGATATTGATGCCAATGGAATCCTTAATGTTTCTG-T 17255793 Query 552591 TGT-GATAA 552598 ||| ||||| Sbjct 17255792 TGTGGATAA 17255784 Score = 140 bits (154), Expect = 3e-27 Identities = 186/256 (73%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA-GTTGA 550056 || || ||| | || ||||| || ||||| ||||| | | |||||||| || || Sbjct 17256953 GGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTGTTCTAGCATGGTAAAAGTGGA 17256894 Query 550057 AATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAAC 550116 || |||||||||||||| || ||| |||| || ||| || | |||| || || || Sbjct 17256893 GATAATTGCCAATGATCAGGGCAACTGAACCACCCCAAGCTACATCGCTTTTACTGACAC 17256834 Query 550117 TGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTAT 550176 ||||| || |||||||||| |||||| |||||| | | ||||| || || || | Sbjct 17256833 TGAACGATTGATTGGTGATGCCGCAAAAAATCAAGTTGCAGTGAATCCCACTAAGACAGT 17256774 Query 550177 TTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATAT 550236 ||||||||| ||||| | |||||| |||| ||| ||||| | ||| ||| | |||| Sbjct 17256773 TTTTGATGCCAAACGACTCATTGGATGAAGATTTGATGATGCCGTTGTCCAGTCTGATA- 17256715 Query 550237 GAAGCATTGGCCTTTC 550252 |||||| ||||| ||| Sbjct 17256714 GAAGCACTGGCCCTTC 17256699 >seq8 Length=26637743 Score = 190 bits (210), Expect = 2e-42 Identities = 386/565 (68%), Gaps = 15/565 (3%) Strand=Plus/Minus Query 550025 TGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGA 550084 ||||| ||||| | || | ||||||| | || |||||||||||| | || ||| | Sbjct 3480909 TGTGTGGGTGTCTTCCAGCACAGTAAAGTAAAGATAATTGCCAATGATAAGGGCAACCTA 3480850 Query 550085 ACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAA 550144 || || ||| ||||| |||| || || || ||||| || |||||||||| ||||| Sbjct 3480849 ACCACCCCAAGCTATGTCGCTTTTACTGATACCGAACAATTGATTGGTGATGCCGCAAAG 3480790 Query 550145 TATCAAGC--CACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAA 550202 ||||||| || || ||||| || || | ||||||||||| ||| || | |||||| Sbjct 3480789 TATCAAGTTGCAATG--AATCCCACTAACATGATTTTTGATGCCAAATGTCTCATTGGAC 3480732 Query 550203 GAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTA 550262 |||| || ||||| | | | ||| | ||||||||||| ||| | ||| | || | Sbjct 3480731 GAAGACTTGATGATGCTGTTATCCAGTCTGATATGAAGCACTGGACCTTCATGGTAGTGA 3480672 Query 550263 ATGTTTCTGGAAAACCTTATATTGAAGCTACTCATGAAGGATCTGTTAAAC--AATTTTC 550320 ||| | | || | || | | || || |||| | |||| || |||| Sbjct 3480671 ATGATGCAGGCAGGCC-CAAGGTCCAGGTAGAATACAAGG----GAGAAACCAAAGTTTC 3480617 Query 550321 --ACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTT 550378 ||||| | | |||||||||||| | | || ||||| ||| || || | Sbjct 3480616 TATCCAGAGGAGGTATCATCTATGGTTCTGACAAAGATGAAGGAAATTGCAGAAGCCTAC 3480557 Query 550379 GTTGGTCAAGA-AGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACA 550437 || | |||| ||||| |||| || | ||||| ||||| || |||||| || || Sbjct 3480556 CTTAG-GAAGACTGTTACCAATGCTGTTGTTACTGTGCCAGCCTACCTTAATGGTTCTCA 3480498 Query 550438 ACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAA 550497 ||||| ||||| |||||||||||| ||||| ||| || ||||| || | || ||||| Sbjct 3480497 GCGTCAGGCTACCAAAGATGCTGGAACTATTGTTGGCCTCAATGTACTCAGAATCATCAA 3480438 Query 550498 TGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAACATAATGATCAAGAACTTAA 550557 ||| || ||||||||||| |||| |||||| | || || | || | ||| || Sbjct 3480437 TGAGCCAACTGCTGCTGCTATTGCTTATGGATTAGACAAGAAGGTTGGTGCTGAAAGAAA 3480378 Query 550558 TGTACTCATCTTTGATTGTGGAGGT 550582 ||| || |||||||| | |||||| Sbjct 3480377 TGTGCTGATCTTTGACTTAGGAGGT 3480353 Score = 138 bits (152), Expect = 9e-27 Identities = 453/696 (65%), Gaps = 20/696 (3%) Strand=Plus/Minus Query 551914 CTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAG 551973 ||||||| ||| | || || | | | || ||| | || || ||| ||||| | | Sbjct 3480165 CTGCTTGTGAACGTGCAAAGCACAGTTTCTCTTCTAGCACCCAGGCCAGAATTGAGATTG 3480106 Query 551974 ATTCATTATTTGAGGGAATTGATTATAATACGCCT-ATTTCGAGGGCCAAATTTGAAGAT 552032 || | || | ||| |||||||| | |||| || ||| | | ||| ||||||||| Sbjct 3480105 ATGCTTTGTATGAAGGAATTGACTTCTATACCTCTTATTACCTGCGCCTGATTTGAAGAA 3480046 Query 552033 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCA 552092 | | |||| || || ||| | || | || || ||| | || ||| || Sbjct 3480045 CTGAATGCTGACCTGTTCCATGGCACACTGGACTCCGTGGAGAAAGCCCTCAGGGATGCA 3479986 Query 552093 AAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCT 552152 ||| | || || || | | ||||| ||||| || | ||||| ||||| | |||| Sbjct 3479985 AAGCTAGACAAGTCTCAGATCCATGACATTGTCCTGTTGGGTGGTTCTACCTGTTTTCCC 3479926 Query 552153 AAAATTCGCGAAA--TGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTA 552210 || |||| |||| | || || || || |||||| ||| |||| || | || | | Sbjct 3479925 AAGATTCA-GAAACTTCTTCAGGATTTCTT-CAATGGAAAAGAATTGAACAAGAGCCTCA 3479868 Query 552211 ATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAA 552270 | || ||||||||||||| |||| ||| | | || |||||||| | |||||| | Sbjct 3479867 ACCCTGATGAGGCTGTTGTTTATG-TGCAGATGTCCAGGCAGCTATCTTATCTGGAGA-- 3479811 Query 552271 CTGA---TGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTT 552327 ||| |||||| | | | || | | || | ||||| |||||||| || |||||| Sbjct 3479810 -TGAATCTGAAAATGTTCGATATTTGCTGCTCTTGGATGTCACTCCTCTTTCCCTTGGTA 3479752 Query 552328 TAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTA 552387 | ||||| | | | || | |||||| ||||| | | |||||| || ||||| Sbjct 3479751 TTGAAACTGCTCGTGGAGTCATGACTGTCCTTATTAAGCGCAATACTGCTGTTCCT---- 3479696 Query 552388 AAAAATCTCGTGTA----TTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAA 552443 | ||| | || | || | || || || || || || | | ||| |||||| Sbjct 3479695 ACAAAGCAGATGCAGACCTTCACAACCTACTCTGACAACCAGCCAGGTGTACTAATTCAG 3479636 Query 552444 ATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTA 552503 ||| |||||| || || | || || ||||| || ||||| | ||| | || Sbjct 3479635 GTTTATGAAGGTGAGAGTGCCATGACCAAGGATAACAACTTGCTTGGCAAGTTTGAATTC 3479576 Query 552504 GAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGAT 552563 || || |||||||| || ||||| || || || ||| |||| ||||| |||| ||| Sbjct 3479575 ACTGGCATACCTCCTGCACCACGTGGTGTCCCCCAGATTCAAGTCACTTTTGATACTGAT 3479516 Query 552564 GCCAATGGAATTTTGAATGTGACTGCTTGTGATAAA 552599 |||||||| || | ||||| ||||| |||||| Sbjct 3479515 GCCAATGGGATCCTTAATGTTTCTGCTATGGATAAA 3479480 >seq294 Length=4342603 Score = 168 bits (186), Expect = 5e-36 Identities = 368/548 (67%), Gaps = 6/548 (1%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || || || || | || ||||| || ||||| || || | || | || || Sbjct 1150713 GCCATCGGCATTGACCTGGGCACCACCTACTCCTGTGTGGGGGTGTTCCAGCACGGCAAG 1150772 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || || ||||||||||||||||| ||| | || || || ||| || | ||||| Sbjct 1150773 GTGGAGATCATTGCCAATGATCAAGGCAACCGCACCACCCCCAGTTACGTGGCCTTCACT 1150832 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTACC 550168 || || || | | |||| ||||| || || | || ||||| || ||||| Sbjct 1150833 GACACCGAGCGGCTCATTGGGGATGCGGCCAAGAACCAGGTAGCCA-TG--AATCCCCAG 1150889 Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228 || ||| | |||||||| || ||||| |||||||| | ||||||||| | || || Sbjct 1150890 AACACTGTCTTTGATGCCAAGCGTTTGATTGGAAGGAAATTTAATGATCCTGTGGTGCAA 1150949 Query 550229 GCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAA 550288 |||||||||| | ||||||||| ||| | | |||| | || || || | || Sbjct 1150950 TCAGATATGAAACTTTGGCCTTTTCAAGTAATCAATGATGGGGGTAAGCCCAAGGTTTTG 1151009 Query 550289 GCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTA 550348 | | | ||||| ||| || | || || |||| || || ||||| | Sbjct 1151010 GTATCGTACAAAGGAGAAAATAAGGCTTTCTATCCTGAGGAAATCTCTTCCATGGTACTG 1151069 Query 550349 ATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATA 550408 | |||||||| | || || || ||| | || || || || |||| || || Sbjct 1151070 ACTAAAATGAAGGAGACTGCAGAAGCATTTTTGGGCCACTCTGTCACCAATGCTGTGATC 1151129 Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || ||||| |||||||||||||| ||||| || || ||||| ||||| || ||| Sbjct 1151130 ACCGTGCCAGCCTATTTTAATGACTCTCAACGCCAGGCCACTAAGGATGCAGGTGTGATT 1151189 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 || ||||| ||||| || | || ||||||||||| || |||||||| |||| ||||| Sbjct 1151190 GCAGGACTCAATGTACTAAGAATCATCAATGAACCCACAGCTGCTGCCATTGCCTATGGT 1151249 Query 550529 CTTGATAA 550536 | ||||| Sbjct 1151250 TTAGATAA 1151257 >seq327 Length=4017700 Score = 132 bits (146), Expect = 4e-25 Identities = 389/591 (66%), Gaps = 15/591 (3%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || || || ||| ||||| ||||| | || ||| ||||| ||| Sbjct 935989 GGCATTGATCTTGGCACTACCTATGCCTGTGTGGGTGTATCCCAGCATGAAAAAGTAGAA 935930 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTAC-TCCATCTTATGTTTCTTTCACGGAAAC 550116 || | ||| ||| |||| | || ||| || || | ||| |||| |||| || || || Sbjct 935929 ATAACTGCAAATAATCATGACAATTGAAGCACCTCAAGCTT-TGTTGCTTTTACTGATAC 935871 Query 550117 TGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTA-ATCCTACCAATACTA 550175 |||| | |||||||||| ||||| |||||| || | |||| | || ||| Sbjct 935870 TGAATGACTGATTGGTGATGCTGCAAAGAATCAAGT---TGCAATATCCCATTAACACTC 935814 Query 550176 TTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATA 550235 |||||||||||| | | | |||||| ||| ||| ||||| | ||| ||| | ||| Sbjct 935813 TTTTTGATGCTAGCCATCTCATTGGACAAAGATTTGATGATGCTGTTGTCCAGTCTGATC 935754 Query 550236 TGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTC 550295 ||| |||||||| ||| | || |||| | | || | || | | |||| Sbjct 935753 TGATACATTGGCCCTTCATGGTGGTGAATGATGCAGGCAGGCCCAAGGTCCAAGCAGAAT 935694 Query 550296 ATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAA 550355 || |||| | || || | ||| | ||| ||||| ||| | | || | Sbjct 935693 ATACAGGAAAGGCCAAGGGTTTCTTTTGAGAGGAGGTTTG-TCTATTGTTCTGACAAAGA 935635 Query 550356 TGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTAC 550415 |||| ||| || | || | |||| | | |||| |||| || | ||||||| Sbjct 935634 TGAAGGAAATGGCAAAAGCCTACCTTGGGAAGGCTGTTATCAATGCTGTTGTCACTGTAC 935575 Query 550416 CAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGAC 550475 |||| |||| || |||| || | ||| ||||| ||||||||| || |||||||| | Sbjct 935574 CAGCCAATTTAAACAACTCTCAGCATCAGGCTACCAAAGATGCTAGAATCATTGCTGGCC 935515 Query 550476 TTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATA 550535 | || | || | || |||||||| || | ||||||||| |||| | ||| || || Sbjct 935514 TCAACATACTCAGAATCATCAATGAGCCAATTGCTGCTGCTATTGCTTGTGG-CT---TA 935459 Query 550536 AACATAA----TGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 ||||||| || | |||| ||||||| || ||| ||| ||||||| Sbjct 935458 AACATAACTATTGGTGCAGAAAGGGATGTACTGATTTTTCATTTTGGAGGT 935408 >seq420 Length=2777332 Score = 131 bits (144), Expect = 1e-24 Identities = 428/660 (65%), Gaps = 5/660 (1%) Strand=Plus/Minus Query 551938 CTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATT 551997 |||| || ||| | || || ||| |||||| ||||| || | ||| ||||| || | Sbjct 1157584 CTCTCTCTTCTAGCACCCAGGCCAGTATTGAGACTGATTCTTTGTATGAAGGAATCGACT 1157525 Query 551998 ATAATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAA 552057 |||| ||||| | ||| ||||||||| | | |||| || || | Sbjct 1157524 TCTATACCTCTATTACCCATGCCCGATTTGAAGAATTGAATGCTGACCTGTTCCATGGCA 1157465 Query 552058 CAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATG 552117 | | || || || || ||| | || ||| ||||| | | || || | | || Sbjct 1157464 CTGTGGACCCTGTGGAGAAAGCCCTCAGGGATGCAAAGCTAAACAACTCTCAGATCCACA 1157405 Query 552118 AAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAA--TGTTAAGTTC 552175 | ||||| || || ||||| ||||| ||||| || |||| |||| | || || Sbjct 1157404 ACATTGTCCTGGTGGGTGGGTCTACCCATATTCCCAAGATTCA-GAAACTTCTTCAGGAT 1157346 Query 552176 TTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGG 552235 || || |||||| | | | || || | || | || || || ||||||||||| ||||| Sbjct 1157345 TTCTT-CAATGGAATAGACTTGAACTAGAGCATCAACCCCGACGAGGCTGTTGCTTATGG 1157287 Query 552236 TGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGT 552295 ||| || || || |||||||| | |||||| | | |||||| | ||| || | | Sbjct 1157286 TGCAGCTATCCAGGCAGCTATCTTATCTGGAGACAAATCTGAAAATGTTCAAGATTTGCT 1157227 Query 552296 ACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAA 552355 || | ||||| |||||||| || |||||| | | ||| | ||| || | |||||| Sbjct 1157226 GCTCTTGGATGTCACTCCTCTTTCCCTTGGTATTGTAACTGCTGGTGGAGTCATGACTGT 1157167 Query 552356 TCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTC 552415 ||||| | |||| |||||||||| || | | | || | || || || Sbjct 1157166 CCTTATTAAGCACAATATTACTATTCCTACAAAGCAGACACAGACCTTCACAACCTACTC 1157107 Query 552416 AGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGA 552475 || || ||| ||| ||| || || ||| |||||| ||| | | || || || Sbjct 1157106 TGACAACCAACCTGATGTACTCATGCAGGTTTATGAAGGTGAATGTGCCATGACCAAGGA 1157047 Query 552476 TAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACC 552535 || || ||| | | ||| | | || || |||||||| || |||| || || Sbjct 1157046 TAGCAACTGGCTTAGCAAGTTTGAACTCACTGGCATGCCTCCTGCACCCTGTGGTGTCCC 1156987 Query 552536 GCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGA 552595 || |||||||| ||||| ||||| ||||||||| | || | ||||| |||| ||||| Sbjct 1156986 CCAGATTGAAGTCACTTTTGATATTGATGCCAATAGGATCCTTAATGTTTCTGC-TGTGA 1156928 >seq258 Length=5202665 Score = 120 bits (132), Expect = 2e-21 Identities = 114/146 (78%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| |||| || | || || ||||| || |||||||| || || ||||| ||||| Sbjct 2392294 GTTACCAATGCTGTTGTTACCGTGCCAGCCTACTTTAATGATTCTCAGCGTCAGGCTACC 2392353 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 ||||||||||| ||||||||| |||||||| || | || |||||||| || |||||| Sbjct 2392354 AAAGATGCTGGCACTATTGCTGGCCTTAATGTACTCAGAATCATCAATGAGCCAACTGCT 2392413 Query 550511 GCTGCACTTGCATATGGACTTGATAA 550536 ||||| |||| |||||| | || || Sbjct 2392414 GCTGCTATTGCTTATGGATTAGACAA 2392439 Score = 96.9 bits (106), Expect = 3e-14 Identities = 136/189 (72%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || ||||| || ||||| ||||| | || | |||||||| || Sbjct 2391340 GGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTGTTTCAGCACGGTAAAGTGGAG 2391399 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || |||||||||||||| || ||| |||| || ||| ||||| |||| || || || Sbjct 2391400 ATAATTGCCAATGATCAGGGCAACCGAACCACCCCAAGCTATGTCGCTTTTACTGATACC 2391459 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAG--CCACTGGTAATCCTACCAATACTA 550175 |||| || |||||||||| ||||| |||||| || || ||||| || || || Sbjct 2391460 GAACGATTGATTGGTGATGCCGCAAAGAATCAAGTTGCAATG--AATCCCACTAACACGG 2391517 Query 550176 TTTTTGATG 550184 |||||| || Sbjct 2391518 TTTTTGGTG 2391526 >seq245 Length=5416782 Score = 113 bits (124), Expect = 4e-19 Identities = 320/481 (67%), Gaps = 27/481 (6%) Strand=Plus/Minus Query 550045 TGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTC 550104 ||||||| | || || ||||| |||||||| || ||| ||| || ||| |||||| | Sbjct 4220639 TGGTAAAATGGAGATAATTGCAAATGATCAGGGCAACCAAACCACCCCAGGCTATGTTGC 4220580 Query 550105 TTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGC--CACTGGTAAT 550162 || || | | |||||| || |||| ||| |||| ||||| || || ||| Sbjct 4220579 TTCTACTAATATTGAACAATTGATTGGGAATGGCACAAAGAGTCAAGTTGCAATG--AAT 4220522 Query 550163 CCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACT 550222 || || || | ||||| ||||| |||||| | | ||| ||||||| | |||| | | Sbjct 4220521 CCCACTAACATCATTTT-GATGCCAAACGTCTCACTGGGTGAAGTTTGA-TGATACTGTT 4220464 Query 550223 GTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGG-AAAACC--- 550278 || ||| | |||||||||||||||| ||| || || |||| | | || | ||| Sbjct 4220463 GTCCAGTCTTATATGAAGCATTGGCCCTTCACGATGGTAAATGATGCAGGCAGGACCAAG 4220404 Query 550279 --TTATATTGAAGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCA 550336 | | | ||| ||| || || | ||| || | ||||| || | | Sbjct 4220403 GTTCAGGTAGAA--TACAAGGGAGAGACC----AAAAGCTTCTATCCAGAGGCTATGTAA 4220350 Query 550337 TCTATGGTTTTAATGAAAATGAAACAAACAGCCAG-TGCTTTTGTTGGTCAAGA-AGTTA 550394 ||||| || ||| || |||||| ||| |||| || || |||| |||| Sbjct 4220349 ACTATGCTTCTAACAAAGATGAAAGAAAATTCCAGAAGCCTT-----CAGAAGACTGTTA 4220295 Query 550395 CGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAG 550454 | |||| || | ||||||||||| || |||||||| || | ||| ||||| |||| Sbjct 4220294 CCAATGCTGTTGTCACTGTACCAGCCTACTTTAATGATTCTGTA--TCAGGCTACCAAAG 4220237 Query 550455 ATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTG 550514 |||||||| |||||| | || ||||| || | || || || | || |||||||||| Sbjct 4220236 ATGCTGGAACCATTGCTAGCCTGAATGTACTCAGAATCATAAACAAGCCAACTGCTGCTG 4220177 Query 550515 C 550515 | Sbjct 4220176 C 4220176 >seq13 Length=23775791 Score = 113 bits (124), Expect = 4e-19 Identities = 151/207 (73%), Gaps = 5/207 (2%) Strand=Plus/Plus Query 550049 AAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTC 550108 ||||| | || ||||| ||| |||| | || |||| || ||| | |||| |||| Sbjct 6447551 AAAGTGAAGATAATTGCAAATTATCAGAGCAAATGAACCACCCCAATTGATGTAGCTTTT 6447610 Query 550109 ACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCC--ACTGGTAATCCTA 550166 || || | |||| || || ||||||| |||||| |||||| | || ||||||| Sbjct 6447611 ACTGATGCCAAACAATTGATTAGTGATGCTGCAAAAAATCAAGTTGGAATG--AATCCTA 6447668 Query 550167 CCAATACTATTTTTGATGCTAAACGTTTAATT-GGAAGAAGTTTTAATGATTCGACTGTT 550225 | || ||| ||||||||| |||| | | ||| ||| |||| ||||||||| | ||| Sbjct 6447669 CTAACACTGTTTTTGATGTCAAACATCTCATTTGGATGAAGATTTAATGATGCTGTTGTC 6447728 Query 550226 CAGGCAGATATGAAGCATTGGCCTTTC 550252 ||| | ||||||||||||||||| ||| Sbjct 6447729 CAGTCTGATATGAAGCATTGGCCCTTC 6447755 >seq202 Length=6569187 Score = 111 bits (122), Expect = 1e-18 Identities = 457/709 (64%), Gaps = 50/709 (7%) Strand=Plus/Plus Query 551913 ACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTA 551972 |||||||| ||||| || || | ||||| || | || || ||| || ||| | Sbjct 5947779 ACTGCTTGTGAAAGTGCAAAGCACACTCTTCCAGC----ACCCAGGCCAGTACTGAGATT 5947834 Query 551973 GATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGAT 552032 ||||| || | ||| |||||||||| |||| |||||| | || | ||||||| Sbjct 5947835 GATTCTTTGTATGAAGGAATTGATTTCTATACTCCTATTACCCACACCCACATTGAAGAA 5947894 Query 552033 ATTTGTTCTGATCT-CTTTA-GAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATT 552090 | | ||||||| || | | | || || | | || ||| || || ||| Sbjct 5947895 TTGAATGCTGATCTGCTCCATGTCACAC---TGGGCTCTTGGAGAAAGCCTTCAGGGATG 5947951 Query 552091 CAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTC 552150 |||| | || || || | | || || ||||| || || ||||| ||||| |||| Sbjct 5947952 CAAAACTAGACAAGTCTCAGATCCACGACATTGTCCTGGTGGGTGGTTCTACCCATATTC 5948011 Query 552151 CTAAAATTCGCGAAATGT---TAAGTTCTTATTTCAATGGTAAAAAATTAAATGAA---- 552203 |||| ||| | |||| | |||| | | |||||||| ||| |||| || ||| Sbjct 5948012 CTAAGATT-GAGAAACTTCATTAAGATTTC--TTCAATGGAAAAGAATTGAAAGAATTGA 5948068 Query 552204 -----AGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTC 552258 || | || || |||||| | |||||||| || | ||||||||||| Sbjct 5948069 AGAAGAGCATCAACCCTGATGAG-------CTTATGGTGCAGCTGTCCAAGCAGCTATCT 5948121 Query 552259 TTTCTG--GACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCT 552316 | |||| |||||| |||||| | ||| || | | || | ||||| |||||||| Sbjct 5948122 TATCTGAAGACAAA--TCTGAAAATGTTCAAGATTTGCTGCTCTTGGATGTCACTCCTCT 5948179 Query 552317 ATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTAC 552376 || | |||| | |||| | | | | | |||||| ||||| | | |||||||| Sbjct 5948180 TTCCCCTGGTATTAAAACTGCTTGTTGAGTCATGACTGTCCTTATTAAGTGCAATACTAC 5948239 Query 552377 TATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTAC 552436 ||||||| ||| | | | || | || || || || || ||| ||| ||| Sbjct 5948240 TATTCCTACAAAACAGACACAGACCTTCACAACCTACTCTGACAACCAACCTGGTGTACT 5948299 Query 552437 AATTCAAATTTTTGAAG--GAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGT--- 552491 ||||| |||| ||||| ||| | | | | || || ||||| ||||||| | Sbjct 5948300 CATTCAGATTTATGAAGGTGAGCATGCCA--TGACCAAGGATAA----CAACTTGTTTGG 5948353 Query 552492 --ACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTA 552549 | ||| |||| | | | || |||||||| || | ||| || || || |||||| | | Sbjct 5948354 CAAGTTTGAATTCACTA-GCATACCTCCTGCACCACTTGGTGTTCCCCAGATTGAAATCA 5948412 Query 552550 CTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 ||| |||| ||||||||||| || | ||||| ||||| ||||| Sbjct 5948413 ATTT-GATACTGATGCCAATGGCATCCTTAATGTTTCTGCTGTAGATAA 5948460 >seq101 Length=10068975 Score = 100 bits (110), Expect = 2e-15 Identities = 141/195 (72%), Gaps = 5/195 (3%) Strand=Plus/Minus Query 563282 TTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAA 563341 || |||| | ||| ||||| |||| | || | | |||||| ||||| || || |||| Sbjct 9126728 TTCCTTTTG-AATGTTGTAGTCAGACAAGGTACGTCCATCTTCCAGTTGCTTGCCAGCAA 9126670 Query 563342 AAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTG 563401 | || ||||| ||||||||||||||||||||||| ||||| || || || ||||| Sbjct 9126669 AGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACAT 9126610 Query 563402 CCTCAATTGTATCAGTGTGAGTACA--TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTT 563459 || |||||||| || | || || |||||||| | || || || | || ||||| Sbjct 9126609 TTTCTATTGTATC--TGAGGGTTCAACCTCGAGAGTTATGGTCTTTCCCATTAGGGTTTT 9126552 Query 563460 AACGAAAATTTGCAT 563474 || ||||| || || Sbjct 9126551 TACAAAAATCTGTAT 9126537 >seq139 Length=8626845 Score = 98.7 bits (108), Expect = 8e-15 Identities = 160/226 (71%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310 ||| ||||| || ||||| || ||||| ||| | | ||| |||||||| |||| ||| Sbjct 1931255 CCTCAGACGAAGGACAAGGTGCAGGGTTGACTCTTTCTGG--ATATTGTAGTCAGAAAGA 1931198 Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 || | |||||| || || || || ||||| || || || || || ||||||||||| Sbjct 1931197 GTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGTTGGTCAGGAGGAATA 1931138 Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTC 563429 ||||||||||| || || || || || ||| || |||||| || | | || || Sbjct 1931137 CCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTATCACTG-GGCTCCACCTC 1931079 Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || || | || || ||||| || || || || || || |||||| Sbjct 1931078 CAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATA 1931033 Score = 96.9 bits (106), Expect = 3e-14 Identities = 159/225 (71%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310 ||| ||||| || ||||| || ||||| ||| | | ||| |||||||| |||| ||| Sbjct 1931027 CCTCAGACGAAGGACAAGGTGCAGGGTCGACTCTTTCTGG--ATATTGTAGTCAGAAAGA 1930970 Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 || | |||||| | || || || ||||| || || || ||||| ||||| ||||| Sbjct 1930969 GTGCGGCCATCTTCCAACTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATG 1930910 Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTC 563429 |||||||||||||| || || || || ||| || |||||| || | | || || Sbjct 1930909 CCTTCTTTATCTTGGATCTTAGCCTTCACATTCTCGATGGTATCACTG-GGCTCCACCTC 1930851 Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || | || || || || || || || ||||| || ||||| Sbjct 1930850 CAGGGTGATGGTCTTGCCTGTTAGGGTCTTTACGAAGATCTGCAT 1930806 Score = 89.7 bits (98), Expect = 4e-12 Identities = 158/226 (70%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310 ||| || || || ||||| || ||||| ||| | | ||| || ||||| |||| ||| Sbjct 1931483 CCTCAGGCGAAGAACAAGGTGCAGGGTTGACTCTTTCTGG--ATGTTGTAGTCAGAAAGA 1931426 Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 || | |||||| || || || || ||||| || || || || || ||||||||||| Sbjct 1931425 GTACGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGTTGGTCAGGAGGAATA 1931366 Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTC 563429 ||||||||||| || || || || || ||| || |||||| || | | || || Sbjct 1931365 CCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTATCACTG-GGCTCCACCTC 1931307 Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || || | || || ||||| || || || || || || |||||| Sbjct 1931306 CAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATA 1931261 >seq611 Length=1445469 Score = 96.9 bits (106), Expect = 3e-14 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| ||||||| | ||||||||||| ||||| ||||| | || || ||||| || Sbjct 532361 GTTACCCATGCAGTTGTTACTGTACCAGCCTATTTCAATGATGCCCAGCGCCAAGCAACC 532420 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACC 550503 |||||||||||| ||||||||| || |||||| | | || |||||||| || Sbjct 532421 AAAGATGCTGGAACTATTGCTGGCCTGAATGTTATGAGGATCATCAATGAGCC 532473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028105622564410