Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orycteropus_20afer_20afer_20[refseq_20GCF_5F000298275.1_202012-09- 20] 22,509 sequences; 4,444,080,527 total letters Query= NC_019559.1 Length=202946 Score E Sequences producing significant alignments: (Bits) Value seq184 89.7 7e-13 >seq184 Length=6952770 Score = 89.7 bits (98), Expect = 7e-13 Identities = 177/262 (68%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 153748 GCGTCCCTCAGATGCTCGTTGAAAACTACACAAGAACCTTTAATTGTAACGTGGCAAAAG 153807 || ||||| ||||| || || ||||| || ||| || || || || ||||| || Sbjct 4689214 GCTTCCCTAAGATGTTCTCTGCAAACTTACCAGGAAGTCTTGATAGTGACATGGCAGAAA 4689273 Query 153808 AAGAAAGCTGTAGGTCCAGAAAATATGGCCACGTATAGCAAAGCCCACGGTGTAGTGCTT 153867 | || ||| | ||||||||||||| ||| | ||||| | || || ||| || Sbjct 4689274 ATAAAGGCTACAAACCCAGAAAATATGGTCACATTCAGCAAGAAAAATGGGGTTGTGGTT 4689333 Query 153868 CAGCCCACATATAAAGATAGAATTAATATAACCGAATTAGGTCTTTTAAACAGTAGTATA 153927 ||||| ||||| || || | || || || | | || || || | |||| Sbjct 4689334 CAGCCTGGCTATAAGGACAGGGTAAACATCACGTATCTCGGACTCAATGACTCCACTATA 4689393 Query 153928 ACGTTTTGGAATGCAACACTGGATGATGAAGGCTGTTATATGTGTCTGTTTAATATGTTC 153987 || || |||||| | || ||||| ||||| || ||||| ||||| || || |||| || Sbjct 4689394 ACCTTCTGGAATACTACCCTGGAGGATGAGGGGTGTTACATGTGCCTCTTCAATACCTTT 4689453 Query 153988 GGTTCTGGTAAGGTATCGGGAA 154009 |||||||| ||| | || |||| Sbjct 4689454 GGTTCTGGGAAGATCTCAGGAA 4689475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 649116511553840