Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orycteropus_20afer_20afer_20[refseq_20GCF_5F000298275.1_202012-09- 20] 22,509 sequences; 4,444,080,527 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq14 215 3e-50 seq8 185 6e-41 seq294 176 3e-38 seq420 150 1e-30 seq327 129 4e-24 seq258 109 4e-18 seq245 104 2e-16 seq48 100 2e-15 seq101 87.8 1e-11 >seq14 Length=23263016 Score = 215 bits (238), Expect = 3e-50 Identities = 606/913 (66%), Gaps = 22/913 (2%) Strand=Plus/Minus Query 475367 ACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGTGT 475426 ||||||||||| | || | ||||||||||| ||||| |||||| | || | | | | Sbjct 17256598 ACAGCTGGAGACACCCACTTAGGTGGTGAAGACTTTGACAATAGAATGGTCAAACGTTTT 17256539 Query 475427 GTTGAAGATTTCAAGAGGAAAAATAA--AGTTGATCTTTCAACATCTGCTAAAGCATTAA 475484 ||| || |||||| | ||| |||| || ||| | | | | | || | Sbjct 17256538 ATTGCTGAGTTCAAGCGCAAACATAAGAAGGACATCAGTGAGAACAAG--AGGGCTGTCT 17256481 Query 475485 GACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTA 475544 | | || | ||||||||||||| | | |||| | || |||||| || ||| | | Sbjct 17256480 GTCACCTCTGCACTGCTTGTGAACATACAAAGCACACACTGTCTTCTAGCACCCAAGCCA 17256421 Query 475545 CTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTA 475604 | |||| |||||||| | | ||||||||| | | |||| |||||| | || Sbjct 17256420 GTATTGAGATTGATTCTTTGTGTGAAGGAATCAACTTCTATACCTCTATTACCCGCGCCC 17256361 Query 475605 AATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTC 475664 |||||||||| | | |||| || || ||| | || || || || ||| | Sbjct 17256360 AATTTGAAGAATTGAATGCTGACCTGTTCCATGGCACACTGGACCCTGTGGAGAAAGCCC 17256301 Query 475665 TCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAA 475724 | || ||| | || || |||||||| || ||||||| ||||| || || | ||||| | Sbjct 17256300 TTAGGGATACAAAGCTAGACAAATCTCAGATCCATGACATTGTCCTGGTGGATGGTTCTA 17256241 Query 475725 CAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTT-AATGGTAAAAAGTTAAAT 475783 | ||||| || || ||||| |||| || | || ||||| ||| | || || Sbjct 17256240 CCCATATTCCCAAGATTC-AGAAACTTCTTCAAGATTTCTTCAATGGAAAAGAATTGAAC 17256182 Query 475784 GAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTA 475843 | || | |||| |||| |||||| ||||||| || |||||||| |||||||| ||| Sbjct 17256181 AAGAGCATCGATCCCAATGAGGCTGTTACATATGGTGCAGCTGTCCAGGCAGCTATCTTA 17256122 Query 475844 TCAGGTCAATCAGACGAGAAACTAAATAATATTG--TACTTGTTGACGTAACTCCACTTT 475901 || || | |||| |||| | || ||| | ||| | || || ||||| |||| Sbjct 17256121 TCTGGAGA--CAGATCTGAAAATGTTCAAGATTTGCTGCTTTTGGATGTCACTCCTCTTT 17256064 Query 475902 CATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTA 475961 | | ||| ||||||| | ||| || | |||||| |||||| | | |||||| ||| Sbjct 17256063 CCCTTGGTATTGAAACTGCTGGTGGAGTCATGACTGTCCTTATTAAGTGCAATACTACTA 17256004 Query 475962 TCCCATGCAAA--AAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAAC 476019 | || | |||| | || | | || | || || ||||| || || | |||| Sbjct 17256003 TTCC-TACAAAGCAGATGCAGACC-TTCACAACCTACTCTGACAACCAGCCTGGTGTACT 17255946 Query 476020 CATCCAAATCTTTGAAGGTGA--AAGAAAATTCACTAAAGATAATAACAAACTTGGAACT 476077 ||| || | | ||||||||| | | | | || || ||||| ||| ||||| | Sbjct 17255945 CATTCAGGTTTATGAAGGTGAGCATGCCA--TGACCAAGGATAACAACTTGCTTGGCAAA 17255888 Query 476078 TTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTT 476137 ||| | || || || |||||||| || | || || || || |||||||| |||||| Sbjct 17255887 TTTGAACTCACTGGCATACCTCCTGCACCACGTGGTGTCCCCCAGATTGAAGTCACTTTT 17255828 Query 476138 GATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGT-GATAAATCTAGT-AACAAGA 476195 ||||||||||| ||||| || ||||||||| ||| |||| ||||| || | | |||| Sbjct 17255827 GATATTGATGCCAATGGAATCCTTAATGTTTCTG-TTGTGGATAAGAGTACTGGAAAAGA 17255769 Query 476196 GTAAAAATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGTA 476255 | || || || ||||| || || | || | || | | ||||| | ||| | || | Sbjct 17255768 G-AATAAGATCACTATCACTAATGACAAGGGCCGCTTGAGTAAAGAAGACATTGAGCGGA 17255710 Query 476256 TGGTTGATGAAGC 476268 |||| | ||||| Sbjct 17255709 TGGTCCAGGAAGC 17255697 Score = 136 bits (150), Expect = 3e-26 Identities = 178/245 (73%), Gaps = 1/245 (0%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||| |||| |||||| | || || || ||| ||||| | ||| | | |||||||| Sbjct 17256959 GCAGTTGGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTGTTCTAGCATGGTAAA 17256900 Query 474389 -GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 || || |||||||||||||| || || || |||| || ||| || | ||||||| Sbjct 17256899 AGTGGAGATAATTGCCAATGATCAGGGCAACTGAACCACCCCAAGCTACATCGCTTTTAC 17256840 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 ||| ||||||| | ||||| ||||| || ||| |||||| |||| ||||| ||| Sbjct 17256839 TGACACTGAACGATTGATTGGTGATGCCGCAAAAAATCAAGTTGCAGTGAATCCCACTAA 17256780 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 || |||||||||| ||| || | ||||| | | ||||||||| || |||||| || Sbjct 17256779 GACAGTTTTTGATGCCAAACGACTCATTGGATGAAGATTTGATGATGCCGTTGTCCAGTC 17256720 Query 474568 TGATA 474572 ||||| Sbjct 17256719 TGATA 17256715 >seq8 Length=26637743 Score = 185 bits (204), Expect = 6e-41 Identities = 401/594 (68%), Gaps = 7/594 (1%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||| |||| |||||| | | || || ||| ||||| | ||| | || | ||||| Sbjct 3480942 GCAGTTGGCATTGATCTTAGCACCACCTACTCCTGTGTGGGTGTCTTCCAGCACAGTAAA 3480883 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 ||| | |||||||||||||| | || || ||| || ||| ||||| |||||||| Sbjct 3480882 GTAAAGATAATTGCCAATGATAAGGGCAACCTAACCACCCCAAGCTATGTCGCTTTTACT 3480823 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || ||||| | ||||| ||||| || || ||||||| |||| ||||| ||| Sbjct 3480822 GATACCGAACAATTGATTGGTGATGCCGCAAAGTATCAAGTTGCAATGAATCCCACTAAC 3480763 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 | ||||||||||| ||| | | ||||| || | |||||||| | | |||| ||| Sbjct 3480762 ATGATTTTTGATGCCAAATGTCTCATTGGACGAAGACTTGATGATGCTGTTATCCAGTCT 3480703 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACC--ATATATAGAAG 474626 |||||| || ||| | || | ||| | |||| || || | || | | || Sbjct 3480702 GATATGAAGCACTGGACCTTCATGGTAGTGAATGATGCAGGCAGGCCCAAGGTCCAGGTA 3480643 Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686 |||||| | || ||||| ||| || | || || | | || || |||||| | Sbjct 3480642 GAATACAAG--GGAGAAACCAAA-GTTTCTATCCAGAGGAGGTATCATCTATGGTTCTGA 3480586 Query 474687 CCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAATT 474745 | || ||||| ||| || | || ||| | |||| || || |||| || || Sbjct 3480585 CAAAGATGAAGGAAATTGCAGAAGCCTACCTTAG-GAAGACTGTTACCAATGCTGTTGTT 3480527 Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 ||||| ||||| || |||||| |||||| ||||| || || |||||||| |||| ||| Sbjct 3480526 ACTGTGCCAGCCTACCTTAATGGTTCTCAGCGTCAGGCTACCAAAGATGCTGGAACTATT 3480467 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 | || || ||||| | | || || ||||| ||||| || || || |||||||||| Sbjct 3480466 GTTGGCCTCAATGTACTCAGAATCATCAATGAGCCAACTGCTGCTGCTATTGCTTATGGA 3480407 Query 474866 CTTGATAAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGATTGTGGAGGT 474919 | || ||||| || ||| |||||| | |||||||| | |||||| Sbjct 3480406 TTAGACAAGAAGGTTGGTGCTGAAAGAAATGTGCTGATCTTTGACTTAGGAGGT 3480353 Score = 179 bits (198), Expect = 2e-39 Identities = 465/694 (67%), Gaps = 16/694 (2%) Strand=Plus/Minus Query 475497 CTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTG 475556 |||||||||||||||| |||| | | |||||| || || | | |||| ||| Sbjct 3480165 CTGCTTGTGAACGTGCAAAGCACAGTTTCTCTTCTAGCACCCAGGCCAGAATTGAGATTG 3480106 Query 475557 ATTCTCTTTTTGAAGGAATTGA-TTATAATACTCTTATTACAAGGGCTAAATTTGAAGAT 475615 || || | | |||||||||||| || || |||||||||| | || ||||||||| Sbjct 3480105 ATGCTTTGTATGAAGGAATTGACTTCTATACCTCTTATTACCTGCGCCTGATTTGAAGAA 3480046 Query 475616 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCT 475675 | | |||| || || ||| | || |||| || ||| ||||| ||| | Sbjct 3480045 CTGAATGCTGACCTGTTCCATGGCACACTGGACTCCGTGGAGAAAGCCCTCAGGGATGCA 3479986 Query 475676 AAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCA 475735 || || ||||| || || ||||||| ||||| || | || ||||| || | |||| Sbjct 3479985 AAGCTAGACAAGTCTCAGATCCATGACATTGTCCTGTTGGGTGGTTCTACCTGTTTTCCC 3479926 Query 475736 AAAATAAGAGAAATGCTTTCATCATAT-TTTAATGGTAAAAAGTTAAATGAAAGTGTAAA 475794 || || ||||| |||| || | || ||||| ||| | || || | || | || Sbjct 3479925 AAGAT-TCAGAAACTTCTTCAGGATTTCTTCAATGGAAAAGAATTGAACAAGAGCCTCAA 3479867 Query 475795 TCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATC---AGGTCA 475851 |||||||| ||||||| ||| | || | |||||| |||||||| ||||| || | | Sbjct 3479866 CCCTGATGAGGCTGTTGTTTAT-GTGCAGATGTCCAGGCAGCTATCTTATCTGGAGATGA 3479808 Query 475852 ATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCT 475911 ||| || | | | || || | | || | || || ||||| ||||| | ||| | Sbjct 3479807 ATCTGA--AAATGTTCGAT-ATTTGCTGCTCTTGGATGTCACTCCTCTTTCCCTTGGTAT 3479751 Query 475912 TGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAA 475971 |||||| | | | || | |||||| |||||| | | |||||| || | || | ||| Sbjct 3479750 TGAAACTGCTCGTGGAGTCATGACTGTCCTTATTAAGCGCAATACTGCTGTTCC-TACAA 3479692 Query 475972 A--AAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATC 476029 | | || | | || | || || ||||| || || || |||| || || | Sbjct 3479691 AGCAGATGCAGA-CCTTCACAACCTACTCTGACAACCAGCCAGGTGTACTAATTCAGGTT 3479633 Query 476030 TTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGG-AACTTTTAATCTTGA 476088 | ||||||||| || | || || ||||| ||| ||||| || ||| ||| | Sbjct 3479632 TATGAAGGTGAGAGTGCCATGACCAAGGATAACAACTTGCTTGGCAAGTTTGAAT-TCAC 3479574 Query 476089 AGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGC 476148 || || |||||||| || | || || || || ||| |||| |||||||||| |||||| Sbjct 3479573 TGGCATACCTCCTGCACCACGTGGTGTCCCCCAGATTCAAGTCACTTTTGATACTGATGC 3479514 Query 476149 AAATGGTATTCTTAATGTTACTGCTTGTGATAAA 476182 ||||| || ||||||||| ||||| |||||| Sbjct 3479513 CAATGGGATCCTTAATGTTTCTGCTATGGATAAA 3479480 >seq294 Length=4342603 Score = 176 bits (194), Expect = 3e-38 Identities = 373/554 (67%), Gaps = 6/554 (1%) Strand=Plus/Plus Query 474324 GAATTGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATG 474383 |||| || || || ||||| | || || || ||| ||||| | || | || | | Sbjct 1150708 GAATGGCCATCGGCATTGACCTGGGCACCACCTACTCCTGTGTGGGGGTGTTCCAGCACG 1150767 Query 474384 GTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTT 474443 | || || || || ||||||||||| ||||| || | || || || || || | | Sbjct 1150768 GCAAGGTGGAGATCATTGCCAATGATCAAGGCAACCGCACCACCCCCAGTTACGTGGCCT 1150827 Query 474444 TTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTG 474503 | ||||| || || | || ||||| ||||| || || | || | || ||||| Sbjct 1150828 TCACTGACACCGAGCGGCTCATTGGGGATGCGGCCAAGAACCAGGTAGCCATGAATCCCC 1150887 Query 474504 TTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCC 474563 || ||| | |||||||| || | |||||||| | || ||| ||||| | || | Sbjct 1150888 AGAACACTGTCTTTGATGCCAAGCGTTTGATTGGAAGGAAATTTAATGATCCTGTGGTGC 1150947 Query 474564 AATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATA---TA 474620 |||| |||||| | |||||||||| | || || |||| ||| ||||| || | | Sbjct 1150948 AATCAGATATGAAACTTTGGCCTTTTCAAGTAATCAATGATGGGGGTAAGCCCAAGGTTT 1151007 Query 474621 TAGAAGCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGG 474680 | | | | |||| ||| |||| ||| || | || || |||| ||||| |||| Sbjct 1151008 TGGTATCG-TACAA--AGGAGAAAATAAGGCTTTCTATCCTGAGGAAATCTCTTCCATGG 1151064 Query 474681 TTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAG 474740 | | | |||||||| | || || ||| | | || || || || |||| | Sbjct 1151065 TACTGACTAAAATGAAGGAGACTGCAGAAGCATTTTTGGGCCACTCTGTCACCAATGCTG 1151124 Query 474741 TAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAA 474800 | || || || ||||| ||||||||||| |||||||| || || ||||| ||||| || Sbjct 1151125 TGATCACCGTGCCAGCCTATTTTAATGACTCTCAACGCCAGGCCACTAAGGATGCAGGTG 1151184 Query 474801 GAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTT 474860 |||||||| || ||||| || | || || |||||||| ||||| || || |||| | Sbjct 1151185 TGATTGCAGGACTCAATGTACTAAGAATCATCAATGAACCCACAGCTGCTGCCATTGCCT 1151244 Query 474861 ATGGTCTTGATAAG 474874 ||||| | |||||| Sbjct 1151245 ATGGTTTAGATAAG 1151258 >seq420 Length=2777332 Score = 150 bits (166), Expect = 1e-30 Identities = 451/686 (66%), Gaps = 10/686 (1%) Strand=Plus/Minus Query 475497 CTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTG 475556 |||||||||||| ||| |||| |||| |||||| || || | | | |||| || Sbjct 1157607 CTGCTTGTGAAC-TGCAAAGCACACTCTCTCTTCTAGCACCCAGGCCAGTATTGAGACTG 1157549 Query 475557 ATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATA 475616 ||||| | | ||||||||| || | |||| |||||| || ||||||||| Sbjct 1157548 ATTCTTTGTATGAAGGAATCGACTTCTATACCTCTATTACCCATGCCCGATTTGAAGAAT 1157489 Query 475617 TTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTA 475676 | | |||| || || || | || || || || ||| ||||| ||| | | Sbjct 1157488 TGAATGCTGACCTGTTCCATGGCACTGTGGACCCTGTGGAGAAAGCCCTCAGGGATGCAA 1157429 Query 475677 AACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAA 475736 | || |||| || || |||| | ||||| || || || || || || ||||| | Sbjct 1157428 AGCTAAACAACTCTCAGATCCACAACATTGTCCTGGTGGGTGGGTCTACCCATATTCCCA 1157369 Query 475737 AAATAAGAGAAATGCTTTCATCATATTTT-AATGGTAAAAAGTTAAATGAAAGTGTAAAT 475795 | || ||||| |||| || | || ||||| | | | || || | || | || Sbjct 1157368 AGATTC-AGAAACTTCTTCAGGATTTCTTCAATGGAATAGACTTGAACTAGAGCATCAAC 1157310 Query 475796 CCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCA 475855 || || || |||||||| ||||| || ||| |||| |||||||| ||||| || | || Sbjct 1157309 CCCGACGAGGCTGTTGCTTATGGTGCAGCTATCCAGGCAGCTATCTTATCTGGAGA--CA 1157252 Query 475856 GACGAGAAACTAAATAATATTG--TACTTGTTGACGTAACTCCACTTTCATTAGGTCTTG 475913 | |||| | || ||| | || | || || ||||| ||||| | ||| ||| Sbjct 1157251 AATCTGAAAATGTTCAAGATTTGCTGCTCTTGGATGTCACTCCTCTTTCCCTTGGTATTG 1157192 Query 475914 AAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAA 475973 ||| | ||| || | |||||| |||||| | |||| | |||| || | |||| Sbjct 1157191 TAACTGCTGGTGGAGTCATGACTGTCCTTATTAAGCACAATATTACTATTCC-TACAAAG 1157133 Query 475974 AATCAAAAGTATTTTCCA-CTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTT 476032 | | || || || | || ||||| || ||| | |||| ||| || | | | Sbjct 1157132 CAGACACAGACCTTCACAACCTACTCTGACAACCAACCTGATGTACTCATGCAGGTTTAT 1157073 Query 476033 GAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGT 476092 ||||||||| | | || || |||| ||| ||| | | ||| | || || Sbjct 1157072 GAAGGTGAATGTGCCATGACCAAGGATAGCAACTGGCTTAGCAAGTTTGAACTCACTGGC 1157013 Query 476093 ATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAAT 476152 || |||||||| ||| | || || || || |||||||| ||||||||||||||||| ||| Sbjct 1157012 ATGCCTCCTGCACCCTGTGGTGTCCCCCAGATTGAAGTCACTTTTGATATTGATGCCAAT 1156953 Query 476153 GGTATTCTTAATGTTACTGCTTGTGA 476178 | || ||||||||| |||| ||||| Sbjct 1156952 AGGATCCTTAATGTTTCTGC-TGTGA 1156928 >seq327 Length=4017700 Score = 129 bits (142), Expect = 4e-24 Identities = 193/273 (71%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 474333 TTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAG 474392 |||| |||||| | || ||||| || ||||| | ||| | || ||| ||||||| Sbjct 935991 TTGGCATTGATCTTGGCACTACCTATGCCTGTGTGGGTGTATCCCAGCATGAAAAAGTAG 935932 Query 474393 AAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAA 474452 |||||| ||| ||| | || | ||| ||| || || | |||| |||||||||| | Sbjct 935931 AAATAACTGCAAATAATCATGACAATTGAAGCACCTCAAGCTTTGTTGCTTTTACTGATA 935872 Query 474453 CTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTA 474512 ||||| || ||||| |||||||| || |||||| |||| |||| |||| ||| Sbjct 935871 CTGAATGACTGATTGGTGATGCTGCAAAGAATCAAGTTGCA--ATATCCCATTAACACTC 935814 Query 474513 TTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATA 474572 |||||||||||| | ||||| | | ||||||||| | |||||| |||||| Sbjct 935813 TTTTTGATGCTAGCCATCTCATTGGACAAAGATTTGATGATGCTGTTGTCCAGTCTGATC 935754 Query 474573 TGCGTCATTGGCCTTTTAAGGTGATAAATGTTG 474605 || |||||||| || | |||| | |||| || Sbjct 935753 TGATACATTGGCCCTTCATGGTGGTGAATGATG 935721 >seq258 Length=5202665 Score = 109 bits (120), Expect = 4e-18 Identities = 222/327 (68%), Gaps = 2/327 (1%) Strand=Plus/Plus Query 475496 ACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTT 475555 ||||||||||||||||| ||||| | || |||||| || || | | | |||| || Sbjct 2392767 ACTGCTTGTGAACGTGCAAAGCGCACACTCTCTTCTAGCACCCAGGCCAGTATTGAGATT 2392826 Query 475556 GATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGAT 475615 |||||| | | ||||||||| || | |||| |||||| | || ||||||||| Sbjct 2392827 GATTCTTTGTATGAAGGAATCGACTTCTATACCTCTATTACCCGTGCCCGATTTGAAGAA 2392886 Query 475616 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCT 475675 | | |||| | || | || | || || || || ||| ||||| ||| | Sbjct 2392887 TTGAATGCTGACTTGTTCCGTGGCACGCTGGACCCTGTGGAGAAAGCCCTCAGGGATGCA 2392946 Query 475676 AAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCA 475735 || || ||||| || || |||| || ||||| || || || ||||| || | || || Sbjct 2392947 AAGCTAGACAAGTCTCAGATCCACGACATTGTCCTGGTGGGTGGTTCTACCCGTATACCC 2393006 Query 475736 AAAATAAGAGAAATGCTTTCATCATAT-TTTAATGGTAAAAAGTTAAATGAAAGTGTAAA 475794 || || ||||| |||| || | || ||||| ||| | || || | || | || Sbjct 2393007 AAGAT-TCAGAAACTTCTTCAAGATTTCTTCAATGGAAAAGAATTGAACAAGAGCATCAA 2393065 Query 475795 TCCTGATGAAGCTGTTGCATATGGAGC 475821 ||| |||||||||||||| ||||| || Sbjct 2393066 TCCCGATGAAGCTGTTGCTTATGGTGC 2393092 Score = 105 bits (116), Expect = 4e-17 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||| |||| |||||| | || || || ||| ||||| | ||| | || | |||||| Sbjct 2391334 GCAGTTGGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTGTTTCAGCACGGTAAA 2391393 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || || |||||||||||||| || || || |||| || ||| ||||| |||||||| Sbjct 2391394 GTGGAGATAATTGCCAATGATCAGGGCAACCGAACCACCCCAAGCTATGTCGCTTTTACT 2391453 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || |||| | ||||| ||||| || || |||||| |||| ||||| ||| Sbjct 2391454 GATACCGAACGATTGATTGGTGATGCCGCAAAGAATCAAGTTGCAATGAATCCCACTAAC 2391513 Query 474509 ACTATTTTTGATG 474521 || |||||| || Sbjct 2391514 ACGGTTTTTGGTG 2391526 Score = 104 bits (114), Expect = 2e-16 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || |||| || ||||| || |||||||||||||| ||||| || || ||||||| Sbjct 2392301 ATGCTGTTGTTACCGTGCCAGCCTACTTTAATGATTCTCAGCGTCAGGCTACCAAAGATG 2392360 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || | ||||| || |||||||| | | || || ||||| ||||| || || || Sbjct 2392361 CTGGCACTATTGCTGGCCTTAATGTACTCAGAATCATCAATGAGCCAACTGCTGCTGCTA 2392420 Query 474855 TTGCTTATGGTCTTGATAAGAA 474876 |||||||||| | || ||||| Sbjct 2392421 TTGCTTATGGATTAGACAAGAA 2392442 Score = 91.5 bits (100), Expect = 1e-12 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 476032 TGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGG 476091 |||||||||| | | || || ||||| ||| ||||| | ||| | || || Sbjct 2393754 TGAAGGTGAACGTGCCATGACCAAGGATAACAACTTGCTTGGCAAATTTGAACTCACTGG 2393813 Query 476092 TATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAA 476151 || |||||||| || | || || || || |||||||| ||||||||||||||||| || Sbjct 2393814 CATACCTCCTGCACCACGTGGTGTCCCCCAGATTGAAGTCACTTTTGATATTGATGCCAA 2393873 Query 476152 TGGTATTCTTAATGTTACTGCTTGTGATAA 476181 ||| || ||||||||| ||||| ||||| Sbjct 2393874 TGGGATCCTTAATGTTTCTGCTGTGGATAA 2393903 >seq245 Length=5416782 Score = 104 bits (114), Expect = 2e-16 Identities = 319/486 (66%), Gaps = 13/486 (3%) Strand=Plus/Minus Query 474382 TGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTC 474441 ||||||| | || |||||||| ||||| || || || ||| || ||| |||||| | Sbjct 4220639 TGGTAAAATGGAGATAATTGCAAATGATCAGGGCAACCAAACCACCCCAGGCTATGTTGC 4220580 Query 474442 TTTTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCC 474501 || |||| | | |||||| | ||||| ||| | || ||||| |||| ||||| Sbjct 4220579 TTCTACTAATATTGAACAATTGATTGGGAATGGCACAAAGAGTCAAGTTGCAATGAATCC 4220520 Query 474502 TGTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGT 474561 ||| | ||||| ||||| ||| | | | ||| | || ||||||||||| ||| Sbjct 4220519 CACTAACATCATTTT-GATGCCAAACGTCTCACTGGGTG-AAGTTTGATGATACTGTTGT 4220462 Query 474562 CCAATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTA--AACCATAT 474619 ||| ||| ||||| |||||||| || | | || |||||| || || | | | | | Sbjct 4220461 CCAGTCTTATATGAAGCATTGGCCCTTCACGATGGTAAATGATGCAGGCAGGACCAAGGT 4220402 Query 474620 ATAGAAGCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATG 474679 || |||||| | || || || ||| || | || || || | | ||| Sbjct 4220401 TCAGGTAGAATACAAG--GGAGAGACCAAAAGCTTCTATCCAGAGGCTATGTAAACTATG 4220344 Query 474680 GTTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGA-AGTAACTGATGC 474738 || || | || |||||| ||| | || | | | | |||| || || |||| Sbjct 4220343 CTTCTAACAAAGATGAAAGAAAATTCCAG----AAGCCTTCAGAAGACTGTTACCAATGC 4220288 Query 474739 AGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGG 474798 || | ||||| ||||| || |||||||||||| | ||| || || |||||||| || Sbjct 4220287 TGTTGTCACTGTACCAGCCTACTTTAATGATTCTGTA--TCAGGCTACCAAAGATGCTGG 4220230 Query 474799 AAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGC 474858 || ||||| | || ||||| | | || || || | ||||| || || || || Sbjct 4220229 AACCATTGCTAGCCTGAATGTACTCAGAATCATAAACAAGCCAACTGCTGCTGCTACTGG 4220170 Query 474859 TTATGG 474864 |||||| Sbjct 4220169 TTATGG 4220164 Score = 91.5 bits (100), Expect = 1e-12 Identities = 442/687 (64%), Gaps = 31/687 (5%) Strand=Plus/Minus Query 475496 ACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTT 475555 |||||||| ||| |||| |||| || | ||||| || || | | | ||| | Sbjct 4219922 ACTGCTTGGGAATGTGCAAAGCACACTGTCTCTTCCAGCACCCAGGC-AGTACTGAGACT 4219864 Query 475556 GATTCTCTTTTTGAAGGAATTGATTATA-ATACTCTTATTACAAGGGCTAAATTTGAAGA 475614 |||||||| | ||||||||| || | || || ||||||| || |||||||||| Sbjct 4219863 GATTCTCTGTATGAAGGAATCGAACGTCTATGCTTTTATTACCCACACTTAATTTGAAGA 4219804 Query 475615 TATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTC 475674 | |||| |||||| | || | || | || || ||| || || ||| | Sbjct 4219803 ATAAAATGCTGACCTCTTTCATAGCACCCTGGACCTTGTGGAGAAAGCCCTTAGGGATGC 4219744 Query 475675 TAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCC 475734 || || ||||| | | | ||||||| ||||| | || || ||||| || | | || Sbjct 4219743 CAAGCTAGACAAGGCTCTAATCCATGACATTGTCCAAGTGGGTGGTTCTACTGTATTCCC 4219684 Query 475735 AAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATGAAAGTGTAAA 475794 || | | ||| | |||| ||| |||| ||| | || || | || | || Sbjct 4219683 AAGAGTCAGAAA-----TTTCTTCA-------ATGGAAAAGAATTTAACAACAGCATCAA 4219636 Query 475795 TCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATC--AGGTCAA 475852 | |||||||||||||||| ||||| || ||||||| ||||| || ||||| | | ||| Sbjct 4219635 TTCTGATGAAGCTGTTGCTTATGGTGCAGCTGTCCCGGCAGCCATCTTATCTGAAGACAA 4219576 Query 475853 TCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTT 475912 || || || | | || | | || | || || ||||| ||||| | ||| || Sbjct 4219575 --AGCTGAAAATGTTCAAGATTTGCTGCTCTTGGATGTTACTCCTCTTTCCCTTGGTATT 4219518 Query 475913 GAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACT-CCTATCCCATGCAA 475971 ||| | | | | || | ||||| | || | |||||| || ||| | | Sbjct 4219517 GAAGCTGCTAGTGGAGTCCTGACTGTCATCATCAAGCACAATACTATCTTTCCTACCAAG 4219458 Query 475972 AAAAT-CAAAAGTATTTTCCACTTATTCTGATAA-TCAAACAACTGTAACCATCCAAATC 476029 | || || || || | |||||||| || | ||| |||| ||| || || Sbjct 4219457 CAGATGCAGAA--CTTCACAGACTATTCTGACAACTGGCTCAA-TGTACTCATTCAGGTC 4219401 Query 476030 TTTGAAGGTGA--AAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTG 476087 | |||||||| | | | | || || ||||| ||| ||||| | |||||| | Sbjct 4219400 TACGAAGGTGAGCATGCCA--TGACCAAGGATAACAACCTGCTTGGCAAGTTTAAT-TCA 4219344 Query 476088 AAGGTATTCCTCCTG-CTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGAT 476146 ||| |||||| ||||| || |||||||| ||||||| ||||||||||||||| Sbjct 4219343 CCGGTGACTCTCCTGTATCCCA-TGGTGTTCCTCAGATTGAAGACACTTTTGATATTGAT 4219285 Query 476147 GCAAATGGTATTCTTAATGTTACTGCT 476173 || | ||| || || ||| || ||||| Sbjct 4219284 GCCAGTGGCATCCTCAATATTTCTGCT 4219258 >seq48 Length=15315231 Score = 100 bits (110), Expect = 2e-15 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| || || || || ||||| || | | || || |||||||| || |||||||| Sbjct 866152 ATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTT 866093 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 |||||| |||||| |||||| ||||| || ||| || | |||||||||||| Sbjct 866092 GTCTTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCTACTTCAAGGGTAAT 866033 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||| || || ||||| |||||||| || Sbjct 866032 GGTCTTACCAGTCAGGGTCTTCACGAAAATCTG 866000 Score = 89.7 bits (98), Expect = 3e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 480651 TGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTA 480710 || || |||||||| || |||||||||||||| |||||| |||||| ||||| || Sbjct 866346 TGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATTCTCAATGGTG 866287 Query 480711 TCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || | |||||| ||||| || |||||||| || ||||| ||||| ||||| Sbjct 866286 TCACTGGGCTCTACTTCAAGAGTAATGGTCTTACCGGTCAGGGTCTTCACGAAGATTTG 866228 >seq101 Length=10068975 Score = 87.8 bits (96), Expect = 1e-11 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| |||||||| |||||||| || || | || ||||||||||||||||||||||| Sbjct 9126692 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTT 9126633 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 || || ||||| || ||| ||| || ||||| | | || | || || || || Sbjct 9126632 ATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAACCTCGAGAGTTAT 9126573 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || | || || || || ||||| || Sbjct 9126572 GGTCTTTCCCATTAGGGTTTTTACAAAAATCTG 9126540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267213679776332