Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orycteropus_20afer_20afer_20[refseq_20GCF_5F000298275.1_202012-09- 20] 22,509 sequences; 4,444,080,527 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq139 91.5 3e-13 >seq139 Length=8626845 Score = 91.5 bits (100), Expect = 3e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| || || || | || | || | || | |||||| ||||| || || Sbjct 1931035 ATACCACCCCTCAGACGAAGGACAAGGTGCAGGGTCGACTCTTTCTGGATATTGTAGTCA 1930976 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || | || ||||| || || || ||||| || | ||||| |||||||| Sbjct 1930975 GAAAGAGTGCGGCCATCTTCCAACTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGG 1930916 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||||||||| || ||| || ||||| || ||||| | || Sbjct 1930915 GGAATGCCTTCTTTATCTTGGATCTTAGCCTTCACATTCTCGATGGTATCACTGGGCTCC 1930856 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || || || ||||| || || |||| || || | ||| |||||||| || Sbjct 1930855 ACCTCCAGGGTGATGGTCTTGCCTGTTAGGGTCTTTACGAAGATCTGCATCTT 1930803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904881328672200