Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orycteropus_20afer_20afer_20[refseq_20GCF_5F000298275.1_202012-09- 20] 22,509 sequences; 4,444,080,527 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq474 143 3e-28 seq684 125 9e-23 seq255 122 1e-21 seq290 116 5e-20 seq112 95.1 1e-13 seq768 87.8 2e-11 >seq474 Length=2271054 Score = 143 bits (158), Expect = 3e-28 Identities = 153/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | |||||||||||| ||||| | |||||| | | || Sbjct 720421 GCTTGGCCAGCTCCCCCGGCAGCAGCAGGCGCACGGCTGTCTGCACCTCGCGGGAGGTGA 720362 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| ||||||||| ||| ||| ||| || ||||||| |||| | Sbjct 720361 TGGTCGAGCGCTTGTTGTAGTGCGCCAAGCGGGAGGCTTCGCTGGCGATGCGCTCGAAGA 720302 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | |||||||| || |||||||||| ||| | |||| || ||||| ||| |||| Sbjct 720301 TATCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAAATGCCGGTGTCCGGGT 720242 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 720241 GCACCTGCTTCAGCACCTTGTA 720220 Score = 143 bits (158), Expect = 3e-28 Identities = 153/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | |||||||||||| ||||| | |||||| | | || Sbjct 725982 GCTTGGCCAGCTCCCCCGGCAGCAGCAGGCGCACGGCTGTCTGCACCTCGCGGGAGGTGA 726041 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| ||||||||| ||| ||| ||| || ||||||| |||| | Sbjct 726042 TGGTCGAGCGCTTGTTGTAGTGCGCCAAGCGGGAGGCTTCGCTGGCGATGCGCTCGAAGA 726101 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | |||||||| || |||||||||| ||| | |||| || ||||| ||| |||| Sbjct 726102 TATCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAAATGCCGGTGTCCGGGT 726161 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 726162 GCACCTGCTTCAGCACCTTGTA 726183 >seq684 Length=1121939 Score = 125 bits (138), Expect = 9e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 ||||| |||||| ||| | ||||||||| || ||||||||||| |||| | ||| || Sbjct 730199 GCCAGCTCGCCGGGCAACAGCAGGCGCACCGCTGTCTGGATCTCCCGCGAGGTGATGGTC 730140 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 ||| ||||| | || ||||| || |||||| | ||||||| |||| || || Sbjct 730139 GAGCGTTTGTTGTAATGGGCCAGGCGAGATGCCTCGCTCGCGATGCGCTCGAAGATATCA 730080 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 || |||||||||||||||| ||| | ||| ||||| ||| ||| ||||| ||| Sbjct 730079 TTAACAAACGAGTTCATGATGCCCATTGCTTTGGACGAGATACCCGTGTCAGGGTGGACC 730020 Query 1254528 TGCTTGAGCACCTTGTA 1254544 ||||| |||||||| || Sbjct 730019 TGCTTCAGCACCTTATA 730003 Score = 122 bits (134), Expect = 1e-21 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||| ||||| ||||||||||| | | | | Sbjct 781681 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGGACGGCAGTCTGGATCTCCCTGGAGGTAA 781740 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| | || |||| || ||||| ||||||| |||| | Sbjct 781741 TGGTGGAGCGCTTGTTGTAATGAGCCAAGCGAGACGCCTCACCCGCGATGCGCTCGAAGA 781800 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||| ||||||| ||| | |||| |||||||| ||| |||| Sbjct 781801 TGTCGTTGACGAACGAATTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCTGGGT 781860 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 781861 GGACCTGCTTCAGCACCTTGTA 781882 Score = 113 bits (124), Expect = 6e-19 Identities = 146/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | ||||||||| || || |||||||| | | | || Sbjct 90244 GCTTGGCCAGCTCCCCCGGCAGCAGCAGGCGCACAGCTGTTTGGATCTCCCTGGAGGTGA 90303 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||| ||||| | |||||||| || ||| || | ||||| |||| | Sbjct 90304 TGGTCGAGCGTTTGTTGTAATGCGCCAGGCGTGAGGCTTCACCAGCTATGCGCTCGAAAA 90363 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| ||| |||| Sbjct 90364 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCAGGGT 90423 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| | ||||||||| Sbjct 90424 GAACCTGCTTCAACACCTTGTA 90445 Score = 113 bits (124), Expect = 6e-19 Identities = 146/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || || ||| | |||||| ||||| ||||||||||| | | || Sbjct 747954 GCTTGGCCAACTCTCCAGGCAGCAGCAGGCGGACGGCCGTCTGGATCTCCCTAGAAGTGA 747895 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 747894 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGAGAGGCCTCCCCTGCGATGCGCTCGAAAA 747835 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || ||||| ||||||| ||| | |||| |||||||| ||| |||| Sbjct 747834 TGTCGTTAACGAACGAATTCATGATGCCCATGGCCTTGGATGAGATGCCAGTGTCCGGGT 747775 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| || |||||||| Sbjct 747774 GGACCTGCTTCAGAACCTTGTA 747753 Score = 111 bits (122), Expect = 2e-18 Identities = 144/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || ||| ||| | |||||| ||||| ||||||||||| | | | || | Sbjct 75692 TGGCCAGCTCCCCGGGCAGTAGCAGGCGGACGGCAGTCTGGATCTCCCTAGAGGTAATGG 75751 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 || ||||||||| | || ||||| || ||||| ||||||| |||| |||| Sbjct 75752 TGGAGCGCTTGTTGTAATGAGCCAGGCGAGAAGCCTCACCCGCGATGCGCTCGAAGATGT 75811 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||| || |||||||||| ||| | |||| |||||||| ||| ||||| | Sbjct 75812 CGTTGACGAATGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCAGTGTCCGGGTGGA 75871 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 | || || || |||||||| Sbjct 75872 CTTGTTTAAGAACCTTGTA 75890 Score = 107 bits (118), Expect = 2e-17 Identities = 145/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | | |||||| ||||| ||||||||||| | | || Sbjct 719717 GCTTGGCCAGCTCCCCGGGTAGCAGCAGGCGTACGGCTGTCTGGATCTCCCTAGACGTGA 719776 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||| || | |||||||| || |||||| ||||||| |||| | Sbjct 719777 TGGTCGATCGCTTATTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 719836 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| ||| || | Sbjct 719837 TGTCGTTGACGAAGGAGTTCATGATACCCATAGCCTTGGACGAGATGCCGGTGTCCGGAT 719896 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| || |||||||| Sbjct 719897 GTACCTGCTTCAGGACCTTGTA 719918 >seq255 Length=5298548 Score = 122 bits (134), Expect = 1e-21 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || ||| | |||||||||||| ||||||||||| | | | || Sbjct 4239667 GCTTGGCTAGCTCCCCAGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 4239608 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||| ||||| | || ||||| || ||||| ||||||| || | | Sbjct 4239607 TTGTCGAGCGTTTGTTGTAATGAGCCAGGCGAGACGCCTCACCTGCGATGCGCTCAAATA 4239548 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||||||||||||||||| ||| | |||| |||||||| |||||| | Sbjct 4239547 TGTCGTTGACAAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGAT 4239488 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 4239487 GGACCTGCTTTAGCACCTTGTA 4239466 Score = 122 bits (134), Expect = 1e-21 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | |||||||||||| ||||||||||| | | || Sbjct 4376776 GCTTGGCCAGCTCCCCAGGCAGCAGCAGGCGCACGGCAGTCTGGATCTCCCTGGAAGTGA 4376717 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| | || ||||| || ||| || | | ||||| |||| | Sbjct 4376716 TAGTCGAACGCTTGTTGTAATGAGCCAGGCGAGAGGCTTCACCGGCTATGCGCTCGAAAA 4376657 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||||||||||||||||| ||| | |||| |||||||| ||| || | Sbjct 4376656 TGTCGTTGACAAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGAT 4376597 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | ||||||||||| |||||||| Sbjct 4376596 GGACCTGCTTGAGAACCTTGTA 4376575 Score = 116 bits (128), Expect = 5e-20 Identities = 147/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| || ||| | |||||| ||||| ||||||||||| | | || Sbjct 4389162 GCTTGGCCAATTCCCCCGGCAGCAGCAGGCGAACGGCCGTCTGGATCTCCCTGGAAGTGA 4389103 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | ||||| ||||| ||||| ||||||| || | | Sbjct 4389102 TGGTCGAGCGCTTGTTATAATGCGCAAGACGAGATGCCTCACCTGCGATGCGCTCAAAGA 4389043 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||||||||||||||||| ||| | |||| |||||||| ||| || | Sbjct 4389042 TGTCATTGACAAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCAGTGTCCGGAT 4388983 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 4388982 GGACCTGCTTCAGCACCTTGTA 4388961 Score = 104 bits (114), Expect = 3e-16 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || || ||| | |||||| || || ||||||||||| | | || Sbjct 4307989 GCTTGGCCAACTCCCCAGGCAGCAGCAGGCGGACAGCAGTCTGGATCTCCCTGGAAGTGA 4308048 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 |||| ||||||||| | || ||||| || ||||| ||||||| |||| | Sbjct 4308049 TCGTAGAGCGCTTGTTATAATGAGCCAGGCGAGATGCCTCACCTGCGATGCGTTCGAAGA 4308108 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| || || || |||||||| Sbjct 4308109 TGTCGTTGACGAACGAGTTCATGATTCCCATGGCCTTGGATGAAATACCGGTGTCGGGGT 4308168 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| | ||| ||||| Sbjct 4308169 GAACCTGCTTCAACACTTTGTA 4308190 Score = 98.7 bits (108), Expect = 1e-14 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || | | | |||||||| || ||||||||||| | | | || Sbjct 4193880 GCTTGGCCAGCTCCCCAGGAAGCAGGAGGCGCACAGCTGTCTGGATCTCTCTGGAGGTGA 4193939 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || |||| ||| |||||| | || || |||| | Sbjct 4193940 TGGTCGAGCGCTTGTTGTAATGAGCCAAACGCGATGCCTCGCCTGCAATACGCTCGAAGA 4193999 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||||||||| ||||||| ||| | ||| || || || |||||||| Sbjct 4194000 TGTCGTTGACAAACGAATTCATGATTCCCATGGCTTTGGATGAAATACCGGTGTCGGGGT 4194059 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| || |||||||| Sbjct 4194060 GGACCTGCTTCAGAACCTTGTA 4194081 Score = 96.9 bits (106), Expect = 4e-14 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || ||| ||| | ||||||||| || ||||||||||| | | ||| | Sbjct 3649977 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACAGCAGTCTGGATCTCCCTGGATGTGATAG 3650036 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | |||||||| | | |||| || |||||| | ||||| |||| || | Sbjct 3650037 TTGAACGCTTGTTGTAAAGAGCCAAGCGAGAAGCCTCGCCTGCTATGCGTTCGAAAATAT 3650096 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 | ||||||| || ||||||| ||| | |||| |||||| || ||| ||||| | Sbjct 3650097 CAGTGACAAAAGAATTCATGATGCTCATGGCCTTGGAGGAGATACCAGTGTCCGGGTGAA 3650156 Query 1254526 CCTGCTTGAGCACCTTGTAGATG 1254548 ||||||| | ||||||||||||| Sbjct 3650157 CCTGCTTCAACACCTTGTAGATG 3650179 Score = 95.1 bits (104), Expect = 1e-13 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 ||||| || || ||| | ||| || || || ||||||||||| | | | ||| || Sbjct 4108281 GCCAGCTCCCCAGGCAGCAGCAGACGAACAGCCGTCTGGATCTCTCTGGAGGTGATGGTC 4108340 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 |||||||| | || ||||| || ||||| | ||||| |||| |||||| Sbjct 4108341 GAACGCTTGTTGTAATGAGCCAGGCGAGACGCCTCACCAGCTATGCGCTCGAAGATGTCG 4108400 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 |||||||| |||||||||| ||| | |||| || || ||| ||| ||||| ||| Sbjct 4108401 TTGACAAAGGAGTTCATGATGCCCATGGCCTTGGACGAAATCCCCGTGTCTGGGTGGACC 4108460 Query 1254528 TGCTTGAGCACCTTGTA 1254544 || || ||||||||||| Sbjct 4108461 TGTTTCAGCACCTTGTA 4108477 Score = 89.7 bits (98), Expect = 6e-12 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | |||||| || || || |||||||| | | || Sbjct 4293965 GCTTGGCCAGCTCCCCAGGCAGCAGCAGGCGGACAGCCGTTTGGATCTCTCTGGAAGTGA 4293906 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| | |||||||| || |||||| ||||||| || | | Sbjct 4293905 TAGTCGAACGCTTGTTGTAATGCGCCAGGCGAGACGCCTCGCCAGCGATGCGCTCAAAGA 4293846 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | ||| ||||| || || |||| Sbjct 4293845 TGTCGTTGACAAAGGAGTTCATGATGCCCATGGCCTTTGACGAGATACCAGTATCCGGGT 4293786 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| || || ||||| Sbjct 4293785 GGACCTGCTTCAGTACTTTGTA 4293764 Score = 87.8 bits (96), Expect = 2e-11 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 1254369 AGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCC 1254428 |||||||| || ||||||||||| | | ||| || ||| ||||| | |||||| Sbjct 4273839 AGGCGCACTGCTGTCTGGATCTCCCTAGATGTGATGGTTGAGCGTTTGTTATAATGCGCC 4273780 Query 1254429 AGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACC 1254488 | ||| ||||| ||||||| || | ||||||||||||||||||||||||| Sbjct 4273779 AAACGAGATGCCTCACCTGCGATGCGCTCAAAGATGTCGTTGACAAACGAGTTCATGATA 4273720 Query 1254489 GACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1254544 ||| | ||| |||||||| || ||||| || ||||| || || ||||| Sbjct 4273719 CCCATAGCTTTGGACGAGATGCCGGTATCCGGGTGGACTTGCTTCAGTACTTTGTA 4273664 >seq290 Length=4407984 Score = 116 bits (128), Expect = 5e-20 Identities = 147/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | ||||||||| || ||||||||||| |||| || Sbjct 3903674 GCTTGGCCAGCTCCCCCGGCAGCAGCAGGCGCACAGCCGTCTGGATCTCCCGCGAAGTGA 3903615 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | ||||||| ||| || ||| |||| || |||| | Sbjct 3903614 TGGTCGAGCGCTTGTTGTAATGCGCCAAGCGGGACGCTTCGCCAGCGATTCGCTCGAAGA 3903555 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| || || || |||||||||| ||| | ||| |||||||| |||||||| Sbjct 3903554 TGTCATTCACGAAGGAGTTCATGATGCCCATGGCTTTGGACGAGATGCCAGTGTCGGGGT 3903495 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 3903494 GGACCTGCTTCAGCACCTTGTA 3903473 Score = 113 bits (124), Expect = 6e-19 Identities = 146/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | ||||||||| || ||||||||||| |||| || Sbjct 3872655 GCTTGGCCAGCTCCCCCGGCAGCAACAGGCGCACAGCCGTCTGGATCTCCCGCGAAGTGA 3872596 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | ||||||| ||| || || ||||||| |||| | Sbjct 3872595 TGGTCGAGCGCTTGTTGTAATGCGCCAAGCGGGACGCTTCACCAGCGATGCGCTCGAAGA 3872536 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| || || || |||||||||| ||| | ||| |||||||| |||||| | Sbjct 3872535 TGTCATTCACGAAGGAGTTCATGATGCCCATGGCTTTGGACGAGATGCCAGTGTCGGGAT 3872476 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 3872475 GGACCTGCTTCAGCACCTTGTA 3872454 Score = 113 bits (124), Expect = 6e-19 Identities = 146/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| ||||| ||| | ||||||||| || ||||||||||| |||| || Sbjct 3929641 GCTTGGCCAGCTCGCCCGGCAGCAGCAGGCGCACAGCCGTCTGGATCTCCCGCGAAGTGA 3929700 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | ||||| | ||| || || ||||||| |||| | Sbjct 3929701 TGGTCGAGCGCTTGTTATAATGCGCTAAGCGGGACGCTTCACCAGCGATGCGCTCGAAGA 3929760 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| || || || |||||||||| ||| | ||| |||||||| |||||| | Sbjct 3929761 TGTCATTCACGAAGGAGTTCATGATACCCATAGCTTTGGACGAGATGCCAGTGTCGGGAT 3929820 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 3929821 GGACCTGCTTCAGCACCTTGTA 3929842 >seq112 Length=10031362 Score = 95.1 bits (104), Expect = 1e-13 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || |||||| | |||||||| | |||| ||| || |||||| |||| |||||| Sbjct 5506440 GCTGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTTACATGCAAGACTGTTGCCAAC 5506381 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAA 1592295 ||||||||||| || | || |||||||| ||||||||||| || ||||| Sbjct 5506380 ATGATCAAGGGGAAAACTCCTGAGGAGATTCGCAAGACCTTCAATATCAA 5506331 >seq768 Length=911624 Score = 87.8 bits (96), Expect = 2e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || || ||||| | || || || || |||||| | |||||||| | |||| ||| || Sbjct 297430 ACACTTTTTGAACTTATTCTGGCTGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTT 297489 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 ||||| |||| ||||||||||||||||| || || || |||||||| ||||| || Sbjct 297490 ACATGCAAAACTGTTGCCAACATGATCAAGGGGAAATCTCCTGAGGAGATTTGCAAGCCC 297549 Query 1592285 TTTAACATCAA 1592295 || || || || Sbjct 297550 TTCAATATAAA 297560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6105292006050353