Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orycteropus_20afer_20afer_20[refseq_20GCF_5F000298275.1_202012-09- 20] 22,509 sequences; 4,444,080,527 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq139 87.8 3e-12 >seq139 Length=8626845 Score = 87.8 bits (96), Expect = 3e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| |||| || ||||||| || || || || | || || || | | | Sbjct 1930807 TGCAGATCTTCGTAAAGACCCTAACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTG 1930866 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | ||||| || ||| || ||| ||||||||||||||| || || || | Sbjct 1930867 ATACCATCGAGAATGTGAAGGCTAAGATCCAAGATAAAGAAGGCATTCCCCCTGACCAGC 1930926 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || ||||| |||||||| || || || || ||| | || | | || || |||| Sbjct 1930927 AGAGGCTCATCTTTGCAGGCAAGCAGTTGGAAGATGGCCGCACTCTTTCTGACTACAATA 1930986 Query 146212 TACAAAAAGAATCGAC 146227 | || ||||| ||||| Sbjct 1930987 TCCAGAAAGAGTCGAC 1931002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785945202256280