Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orycteropus_20afer_20afer_20[refseq_20GCF_5F000298275.1_202012-09- 20] 22,509 sequences; 4,444,080,527 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq74 86.0 7e-12 >seq74 Length=12003515 Score = 86.0 bits (94), Expect = 7e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 104904 AGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGA 104963 ||||||| || ||||| ||||| ||||||||||| |||||||| ||||||| | |||| Sbjct 11038412 AGTCTCAGACAGAGACAGGTACCCCATACATGCTCTACAAAGATTCCTGTAATCGGAAGA 11038471 Query 104964 GTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAAT 105023 | || || |||| |||| |||||| | ||| || || || ||| | | |||| Sbjct 11038472 GCAACCAGCAGAACCTGGGAACGATCAAATGCAGCAACCTGTGCACGGAAGTAGTAGAAT 11038531 Query 105024 TTACAGACAAAGATGAG 105040 ||| |||||||||| Sbjct 11038532 ATACCAGCAAAGATGAG 11038548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583096692283160