Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orycteropus_20afer_20afer_20[refseq_20GCF_5F000298275.1_202012-09- 20] 22,509 sequences; 4,444,080,527 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq30 84.2 8e-12 >seq30 Length=19208098 Score = 84.2 bits (92), Expect = 8e-12 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 52110 ATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAA-GGTAAGCTTTC 52168 ||||| || ||||||||||| | || | ||| |||||||| | |||| ||| |||| || Sbjct 15109434 ATGGCACTGCCTCCCTGCCATGCCCTTTGCCAGTTCTATGT-GGTGAACGGTGAGCTGTC 15109492 Query 52169 GTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAG 52228 ||||| |||| ||| |||| | || ||| | |||| || || || ||||| ||||| Sbjct 15109493 CTGCCAGCTGTACCAGAGGTCAGGAGATATGGGCCTGGGGGTGCCTTTCAACATCGCCAG 15109552 Query 52229 CTATTCCTTGCTGAC 52243 ||| || |||| || Sbjct 15109553 CTACGCCCTGCTCAC 15109567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190045188408490