Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Procavia_20capensis_20[genbank_20GCA_5F000152225.2_202014-12-16] 65,694 sequences; 3,602,182,911 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq2239 95.1 8e-15 >seq2239 Length=279090 Score = 95.1 bits (104), Expect = 8e-15 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 97397 CTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTT 97456 ||| ||||||||| |||||||||||||| || || |||||||| || || | ||||||| Sbjct 215768 CTTTATATTCTGCACCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATCTCCTT 215709 Query 97457 CTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAA 97516 |||||| || |||| || || | || ||| || | |||| |||| |||||||| | Sbjct 215708 CTTCTCGGGCAGAGAATCCCAGGCTGTCCAAAAAGTCTCGAGATGCATTAGCATCCCAGA 215649 Query 97517 TGTGCACACC 97526 | | ||| || Sbjct 215648 TCTTCACTCC 215639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346506348907580