Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Procavia_20capensis_20[genbank_20GCA_5F000152225.2_202014-12-16] 65,694 sequences; 3,602,182,911 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1874 167 4e-37 seq597 152 8e-33 seq36018 140 5e-29 seq2227 132 8e-27 seq2724 127 3e-25 seq23793 123 4e-24 >seq1874 Length=500210 Score = 167 bits (184), Expect = 4e-37 Identities = 200/269 (74%), Gaps = 2/269 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||||||||| ||||||| | || || || || |||||||| || ||||||||||| || | Sbjct 331157 CGCTAAGCGCCATCGCAAGGTC-CTGCGTGACAACATCCAGGGCATCACCAAGCCCGCCA 331215 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 ||||||| || ||||| ||||| || || ||||| ||||||| | |||| || |||| Sbjct 331216 TCCGTCGCCTTGCTCGGCGTGGAGGCGTTAAGCGCATCTCTGGCCTCATCTACGAGGAGA 331275 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 ||||| || | ||| | ||| | ||| ||| |||| || || || ||| |||| Sbjct 331276 CTCGTGGGGTGCTCAAGGTTTTCTTGGAGAACGTGATCCGGGACGCCGTCACCTACACCG 331335 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| |||||| ||||||| | ||||| || | || || || | Sbjct 331336 AGCACGCCAAGCGCAAGACGGTCACCGCCATGGACGTGGTCTACGCGCTTAAGCGCCAGG 331395 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | || | ||||||| ||||| ||||| Sbjct 331396 GACGCACTCTTTATGGCTTTGGCGGTTAA 331424 Score = 140 bits (154), Expect = 5e-29 Identities = 179/244 (73%), Gaps = 2/244 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||| || || | | || || || || |||||||| || ||||||||||| || | Sbjct 351086 CGCCAAGCGCCACCGGAAGGTC-CTCCGCGACAACATCCAGGGCATCACCAAGCCCGCCA 351144 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| |||||||| || || || || || ||||| |||| || | |||| || |||| Sbjct 351145 TCCGGCGTCTGGCGCGGCGCGGCGGCGTGAAGCGCATCTCCGGCCTCATCTACGAGGAGA 351204 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | || | ||| ||||||| ||| ||| |||| || || || ||| |||| Sbjct 351205 CCCGCGGCGTGCTCAAGGTCTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACCG 351264 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| || ||| ||||||| | || ||||| |||| ||||||| Sbjct 351265 AGCACGCCAAGCGCAAGACGGTGACCGCCATGGACGTAGTGTATGCTCTGAAGCGTCAAG 351324 Query 16671 GCCG 16674 | || Sbjct 351325 GGCG 351328 Score = 136 bits (150), Expect = 6e-28 Identities = 178/244 (73%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||||||||| || |||| | || || |||| ||||| || || ||||||||||| || | Sbjct 395309 CGCTAAGCGCCACCGCAAGGTC-CTGAGAGACAACATTCAGGGCATCACCAAGCCGGCCA 395251 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| |||||||| || || || || |||||||| |||| || | |||| || |||| Sbjct 395250 TCCGGCGTCTGGCCCGGCGCGGCGGTGTCAAGCGCATCTCCGGCCTCATCTACGAGGAGA 395191 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | || ||||| | ||||| ||| ||| |||| || || || ||| |||| Sbjct 395190 CCCGCGGCGTGCTGAAGGTTTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACCG 395131 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || |||||||| ||| | ||||| | ||||| || | || || || | Sbjct 395130 AGCACGCCAAGCGGAAGACTGTGACCGCGATGGACGTGGTCTACGCCCTCAAGCGCCAGG 395071 Query 16671 GCCG 16674 | || Sbjct 395070 GACG 395067 Score = 127 bits (140), Expect = 3e-25 Identities = 187/262 (71%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||| || || | | || || || || |||||||| || ||||||||||| || | Sbjct 365446 CGCCAAGCGCCACCGGAAGGTC-CTCCGCGACAACATCCAGGGCATCACCAAGCCCGCCA 365388 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| |||||||| || || || || || ||||| |||| || | |||| || |||| Sbjct 365387 TCCGGCGTCTGGCGCGGCGCGGCGGCGTGAAGCGCATCTCCGGCCTCATCTACGAGGAGA 365328 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | || | ||| ||||||| ||| ||| |||| || || || ||| |||| Sbjct 365327 CCCGCGGCGTGCTCAAGGTCTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACCG 365268 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| || ||| ||||||| | ||||| || | || || || | Sbjct 365267 AGCACGCCAAGCGCAAGACGGTGACCGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGG 365208 Query 16671 GCCGTAAGATTTATGGTTTTGG 16692 | || | | || || ||||| Sbjct 365207 GGCGCACTCTCTACGGCTTTGG 365186 >seq597 Length=1010878 Score = 152 bits (168), Expect = 8e-33 Identities = 196/268 (73%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| || | | || || || || |||||||| || ||||||||||| || || Sbjct 848872 GCTAAGCGTCACCGGAAGGTC-CTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 848814 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| |||||||| || || || || || ||||| |||| || | |||| || |||| Sbjct 848813 CCGGCGTCTGGCGCGGCGCGGCGGCGTGAAGCGCATCTCCGGCCTCATCTACGAGGAGAC 848754 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | ||| ||||||| ||| ||| |||| || || || ||| ||||| Sbjct 848753 CCGCGGCGTGCTCAAGGTCTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACCGA 848694 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| || || | |||||| ||||||| || | || || || || Sbjct 848693 GCACGCCAAGCGCAAGACCGTTACGGCTATGGATGTCGTCTACGCTCTCAAGCGCCAGGG 848634 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 || | | |||||||||||| ||||| Sbjct 848633 TCGCACCCTGTATGGTTTTGGAGGTTAA 848606 Score = 131 bits (144), Expect = 3e-26 Identities = 174/242 (72%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| || || | | ||||| ||||||||||| || ||||| ||||| || ||| Sbjct 842306 GCCAAGCGCCACCGTAAAGTGCTTCGTGATAACATCCAGGGCATCACTAAGCCCGCCATC 842365 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||| |||| || || || || |||||||| |||| || | | |||||||||| Sbjct 842366 CGGCGTTTGGCGCGGCGCGGCGGTGTCAAGCGCATCTCCGGCCTCATTTATGAAGAGACG 842425 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || | ||| |||| || ||| ||| |||| || || || ||| |||||| Sbjct 842426 CGCGGCGTGCTCAAGGTCTTTCTGGAGAACGTGATCCGGGACGCCGTCACCTACACCGAG 842485 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || ||||| || ||| ||||||| | ||||| || | || || || || Sbjct 842486 CACGCCAAGCGGAAGACGGTGACCGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGGA 842545 Query 16673 CG 16674 || Sbjct 842546 CG 842547 Score = 123 bits (136), Expect = 4e-24 Identities = 173/243 (71%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| |||||||| || | | | || || |||||||| || ||||||||||| || || Sbjct 956283 CGCGAAGCGTCACCGTAAAGTGTTGCGTGACAACATCCAGGGCATCACCAAGCCCGCCAT 956342 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || ||||| || || || || || ||||| |||| || | |||| || |||| Sbjct 956343 CCGGCGCCTGGCGCGGCGCGGCGGCGTGAAGCGCATCTCCGGCCTCATCTACGAGGAGAC 956402 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | ||| ||||||| ||| ||| |||| || || || ||| ||||| Sbjct 956403 CCGCGGCGTGCTCAAGGTCTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACCGA 956462 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| || ||| ||||||| | ||||| || | || || || || Sbjct 956463 GCACGCCAAGCGCAAGACGGTGACCGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGG 956522 Query 16672 CCG 16674 || Sbjct 956523 GCG 956525 >seq36018 Length=1458 Score = 140 bits (154), Expect = 5e-29 Identities = 187/260 (72%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| || || | | ||||| ||||||||||| || ||||| ||||| || ||| Sbjct 644 GCCAAGCGCCACCGTAAAGTACTTCGTGATAACATCCAGGGCATCACTAAGCCCGCCATC 585 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || |||||||| || || || || |||||||| |||| || | | |||||||||| Sbjct 584 CGGCGTCTGGCGCGGCGCGGCGGTGTCAAGCGCATCTCCGGCCTCATTTATGAAGAGACG 525 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || | ||| ||||||| ||| ||| |||| || || || ||| |||||| Sbjct 524 CGCGGCGTGCTCAAGGTCTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACCGAG 465 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || ||||| || ||| ||||||| | ||||| || | || || || || Sbjct 464 CACGCCAAGCGCAAGACGGTGACCGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGGA 405 Query 16673 CGTAAGATTTATGGTTTTGG 16692 || | | || || ||||| Sbjct 404 CGCACCCTGTACGGCTTTGG 385 >seq2227 Length=469810 Score = 132 bits (146), Expect = 8e-27 Identities = 175/243 (72%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| |||||||| || | | || || || |||||||| || ||||||||||| || || Sbjct 57806 CGCCAAGCGTCACCGAAAAGTCCTCCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 57747 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| |||||||| || || || || || ||||| |||| || | |||| || |||| Sbjct 57746 CCGGCGTCTGGCGCGGCGCGGCGGCGTGAAGCGCATCTCCGGCCTCATCTACGAGGAGAC 57687 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | ||| ||||||| ||| ||| |||| || || || ||| ||||| Sbjct 57686 CCGCGGCGTGCTCAAGGTCTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACCGA 57627 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| || ||| ||||||| | ||||| || | || || || || Sbjct 57626 GCACGCCAAGCGCAAGACGGTGACCGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGG 57567 Query 16672 CCG 16674 || Sbjct 57566 GCG 57564 Score = 132 bits (146), Expect = 8e-27 Identities = 175/243 (72%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || || | | ||| || || |||||||| || ||||||||||| || || Sbjct 117891 CGCCAAGCGCCACCGGAAAGTTCTGCGTGACAACATCCAGGGCATCACCAAGCCCGCCAT 117950 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| |||||||| || || || || || ||||| |||| || | |||| || |||| Sbjct 117951 CCGGCGTCTGGCGCGGCGCGGCGGCGTGAAGCGCATCTCCGGCCTCATCTACGAGGAGAC 118010 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | ||| ||||||| ||| ||| |||| || || || ||| ||||| Sbjct 118011 CCGCGGCGTGCTCAAGGTCTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACCGA 118070 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| || ||| ||||||| | ||||| || | || || || || Sbjct 118071 GCACGCCAAGCGCAAGACGGTGACCGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGG 118130 Query 16672 CCG 16674 || Sbjct 118131 GCG 118133 Score = 131 bits (144), Expect = 3e-26 Identities = 177/244 (73%), Gaps = 2/244 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||||||||| || || | | || || || || |||||||| || ||||||||||| || | Sbjct 88451 CGCTAAGCGCCACCGGAAGGTC-CTCCGCGACAACATCCAGGGCATCACCAAGCCCGCCA 88509 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| |||||||| || || || || || ||||| |||| || | |||| || |||| Sbjct 88510 TCCGGCGTCTGGCGCGGCGCGGCGGCGTGAAGCGCATCTCCGGCCTCATCTACGAGGAGA 88569 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | || | ||| ||||||| ||| ||| |||| || || || ||| |||| Sbjct 88570 CCCGCGGCGTGCTCAAGGTCTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACCG 88629 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| || ||| ||||||| | ||||| || | || || || | Sbjct 88630 AGCACGCCAAGCGCAAGACGGTGACCGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGG 88689 Query 16671 GCCG 16674 | || Sbjct 88690 GGCG 88693 Score = 127 bits (140), Expect = 3e-25 Identities = 176/244 (72%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||||||||| || || | | | || || || |||||||| || ||||||||||| || | Sbjct 119373 CGCTAAGCGCCACCGTA-AGGTGTTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCA 119315 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| |||||||| || || || || || ||||| |||| || | |||| || |||| Sbjct 119314 TCCGGCGTCTGGCGCGGCGCGGCGGCGTGAAGCGCATCTCCGGCCTCATCTACGAGGAGA 119255 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | || | ||| ||||||| ||| ||| |||| || || || ||| |||| Sbjct 119254 CCCGCGGCGTGCTCAAGGTCTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACCG 119195 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| || ||| ||||||| | ||||| || | || || || | Sbjct 119194 AGCACGCCAAGCGCAAGACGGTGACCGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGG 119135 Query 16671 GCCG 16674 | || Sbjct 119134 GGCG 119131 Score = 122 bits (134), Expect = 1e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 || |||||||| || ||||||||||| || ||||| |||||||| || || || || || Sbjct 152623 GACAACATCCAGGGCATCACCAAGCCCGCCATCCGGCGTCTGGCGCGGCGCGGCGGCGTG 152564 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 ||||| |||| || | |||| || |||| || | || | ||| ||||||| || Sbjct 152563 AAGCGCATCTCCGGCCTCATCTACGAGGAGACCCGCGGCGTGCTCAAGGTCTTCCTGGAG 152504 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | ||| |||| || || || ||| ||||||||||| || || ||||| || ||| || Sbjct 152503 AACGTGATCCGGGACGCCGTCACCTACACCGAGCACGCCAAGCGCAAGACGGTGACCGCC 152444 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCG 16674 ||||| | ||||| || | || || || || || Sbjct 152443 ATGGACGTGGTCTACGCGCTCAAGCGCCAGGGGCG 152409 >seq2724 Length=624619 Score = 127 bits (140), Expect = 3e-25 Identities = 176/244 (72%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||| || || | | || || || || |||||||| || ||||||||||| || | Sbjct 328322 CGCCAAGCGCCACCGGAAGGTC-CTCCGCGACAACATCCAGGGCATCACCAAGCCCGCCA 328264 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| |||||||| || || || || || ||||| |||| || | |||| || |||| Sbjct 328263 TCCGGCGTCTGGCGCGGCGCGGCGGCGTGAAGCGCATCTCCGGCCTCATCTACGAGGAGA 328204 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | || | ||| ||||||| ||| ||| |||| || || || ||| |||| Sbjct 328203 CCCGCGGCGTGCTCAAGGTCTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACCG 328144 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| || ||| ||||||| | ||||| || | || || || | Sbjct 328143 AGCACGCCAAGCGCAAGACGGTGACCGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGG 328084 Query 16671 GCCG 16674 | || Sbjct 328083 GGCG 328080 >seq23793 Length=6434 Score = 123 bits (136), Expect = 4e-24 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| || ||||| |||||||| || || || || Sbjct 5846 CGTGACAACATCCAGGGCATCACCAAGCCCGCCATCCGGCGTCTGGCGCGGCGCGGCGGC 5905 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || ||||| |||| || | |||| || |||| || | || | ||| ||||||| Sbjct 5906 GTGAAGCGCATCTCCGGCCTCATCTACGAGGAGACCCGCGGCGTGCTCAAGGTCTTCCTG 5965 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| || || || ||| ||||||||||| || || ||||| || ||| Sbjct 5966 GAGAACGTGATCCGGGACGCCGTCACCTACACCGAGCACGCCAAGCGCAAGACGGTGACC 6025 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCG 16674 ||||||| | ||||| || | || || || || || Sbjct 6026 GCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGGGCG 6063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79015135515942