Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Procavia_20capensis_20[genbank_20GCA_5F000152225.2_202014-12-16] 65,694 sequences; 3,602,182,911 total letters Query= NC_009334.1 Length=172764 Score E Sequences producing significant alignments: (Bits) Value seq2054 127 2e-24 >seq2054 Length=1030836 Score = 127 bits (140), Expect = 2e-24 Identities = 108/133 (81%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 9861 AGGGCTACCTTGGATGCCAGGCCCTGTCAGAAATGATCCAATTCTACCTGGAGGAAGTCA 9920 |||| ||||| || ||||| ||| |||| || |||||| | || |||||||||| || | Sbjct 304897 AGGGTTACCTCGGTTGCCAAGCCTTGTCGGAGATGATCAAGTTTTACCTGGAGGTGGTGA 304838 Query 9921 TGCCACAGGCTGAAAACCAGGACCCTGAAGCCAAAGACCATGTAAATTCTTTGGGTGAAA 9980 ||||||||||||| ||||||| |||||| | ||| || || || ||||| |||| |||| Sbjct 304837 TGCCACAGGCTGAGAACCAGGGCCCTGACGTCAAGGAGCACGTGAATTCCCTGGGGGAAA 304778 Query 9981 ATCTAAAGACCCT 9993 |||| |||||||| Sbjct 304777 ATCTGAAGACCCT 304765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552262922781760