Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Procavia_20capensis_20[genbank_20GCA_5F000152225.2_202014-12-16] 65,694 sequences; 3,602,182,911 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2094 311 1e-79 seq2716 298 7e-76 seq3 188 9e-43 >seq2094 Length=898179 Score = 311 bits (344), Expect = 1e-79 Identities = 836/1270 (66%), Gaps = 20/1270 (2%) Strand=Plus/Plus Query 6889 CTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTC 6948 ||||| || || || || || ||| || | |||||||| | || || || || Sbjct 629412 CTTAGTGGGGATGGTGGTGTTCCTCTTGATGAGTGGGGTCATGACGCCGCCAGCCGTCTC 629471 Query 6949 GAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCC 7008 || || || ||||| || |||||||| | || | ||||||||| || ||| | | Sbjct 629472 GATGCCCAGCGACAGCGGGGTCACGTCGAGCAGCAGCAGGTCTTGCACG--TTCTCTGAC 629529 Query 7009 TTCACCCG--TTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGG 7066 || ||| | | |||||| || || |||| || ||||| || |||||||| |||||| Sbjct 629530 TTGTCCCCAATGAGGATGGCCGCCTGCACCGCTGCGCCGTAAGCCACCGCCTCGTCGGGG 629589 Query 7067 TTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTC 7126 || || | || ||||| || || || || || ||||| | || | || || || Sbjct 629590 TTGATGCTCTTGTTCAGCTCCTTGCCATTGAAGAAATCCTGCAGCAGCTTCTGGATCTTG 629649 Query 7127 GGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTT 7186 ||||| || || || || || ||||| ||||| || | | | || || | ||| Sbjct 629650 GGGATGCGAGTGGAGCCGCCCACCAACACGATCTCTTGTATCTGGCCCTTGTCCAGCTTG 629709 Query 7187 GAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGT 7246 | ||| || || | ||| || || || |||| ||||| | ||| ||| Sbjct 629710 GCGTCGCGCAGGGCTTTCTCCACCGGCTCCAGGGTCCCGCGGAAGAGGTCGGCGTTCAGC 629769 Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306 ||||| || || || ||||| || || || ||||| || ||||| ||||| | ||| || Sbjct 629770 TCCTCGAAGCGGGCGCGGGTGATAGACGTGTAGAAGTCCACGCCCTCGTAGAGCGAGTCG 629829 Query 7307 ATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTT 7366 || || ||| | | || | | ||| | || ||||| |||||||| ||||| || Sbjct 629830 ATCTCGATGCTGGCCTGCGTGGACGAGCTCAGGGTGCGCTTGGCGCGCTCGCACGCGGTG 629889 Query 7367 CGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAAC 7426 || | || || | ||| ||| ||| | ||| || ||||| || || || || ||| Sbjct 629890 CGCAGCCGCCGCACGGCCCGCTTGTTGGGCGCAATGTCCTTCTTGTGCTTGCGCTTGAAC 629949 Query 7427 TCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCC 7486 || || | | ||| | | | | || || || || || |||| ||| |||||| Sbjct 629950 TCCTCCGCCAGGTGGCTCACCATGCGGTTGTCAAAGTCCTCGCCGCCCAGGTGAGTATCC 630009 Query 7487 CCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAAC 7546 || ||||| | || || || ||||| || | || ||| | | | || || || || Sbjct 630010 CCGGCGGTGGACTTCACCTCGAAGATGCCGTCCTCGATGGTCAGGATGGACACGTCGAAG 630069 Query 7547 GTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG------TTCTTA 7600 || || |||||||||||||| ||||| |||||| | ||| | | | ||||| Sbjct 630070 GTGCCGCCACCCAGGTCAAAGATGAGCACGTTCTTCTCGCCACCCGGGCAGCCCTTCTTG 630129 Query 7601 TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGG 7660 || || || || ||||| || ||||| || || || || || || || || ||| ||| Sbjct 630130 TCCAGGCCATAGGCGATGGCGGCCGCTGTGGGCTCGTTGATGATGCGCAGCACGTTGAGG 630189 Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720 || | || || |||| || || || || || || ||||| || || || |||||||| Sbjct 630190 CCCGTGATGGTGCCCGCGTCCTTGGTGGCCTGGCGCTGCGAGTCATTGAAATAGGCCGGC 630249 Query 7721 ACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATT 7780 ||||| | ||||||| | || || || || || | ||| ||||| || ||||| Sbjct 630250 ACCGTGATGACCGCGCTCTGCACCTTGCCCCCCAGGTAAGCTTCGGCGATCTCCTTCATC 630309 Query 7781 TTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTTCACCGTTAAA 7839 || || || ||||| || || ||||| || | | | | || || |||| || || | Sbjct 630310 TTCGTGAGGACCATGGAGGAGATCTCCTCCG-GGAAGAAGGTCTTGATTTCGCCCTTGTA 630368 Query 7840 ATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTT 7899 || || | | ||||||| | | | || | ||| ||| ||| | ||| Sbjct 630369 CTCCACCTGCACTTTGGGTTT---CCCTCCCTCGCTCACCACCCGGAACGGCCAGTGTTT 630425 Query 7900 CATATCGTCTTGGACCTGTTG-GTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAA 7958 ||| || || | | || | |||| ||||| | |||||| || | ||| || || | Sbjct 630426 CATGTCTGACTGCA-CGGTGGCGTCCTCGAACTTGCGTCCGATCAGCCTCTTGGCGTCGA 630484 Query 7959 AAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTT 8018 | | |||||| |||| |||||||| |||||||| || || || || ||||| || | Sbjct 630485 AGATTGTGTTGGTGGGATTCATGGCCACCTGGTTCTTGGCGGCATCGCCAATAAGGCGCT 630544 Query 8019 CATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAA 8078 | | || || || || ||||| ||||| || || || || ||||| || || | Sbjct 630545 C---GGTGTCGGTGAAGGCTACGTAGCTGGGGGTGGTGCGGTTGCCCTGGTCATTGGCGA 630601 Query 8079 TAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAA 8138 | || || || | ||| ||| |||| || |||||||| || || || |||| || | Sbjct 630602 TGATCTCAACCTTGCCGTGTTGGAAGACCCCCACGCACGAGTAGGTGGTGCCTAGGTCGA 630661 Query 8139 TACCGATTGC 8148 ||||||| || Sbjct 630662 TACCGATAGC 630671 >seq2716 Length=930914 Score = 298 bits (330), Expect = 7e-76 Identities = 1032/1596 (65%), Gaps = 38/1596 (2%) Strand=Plus/Plus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| ||| |||| || || || ||||| | ||||| ||||| || || || Sbjct 423122 TCATCCTCAGCTTTGTATTTCTCAGCATCCAGAACCATGCGCTCAATCTCCTCCTTGCTC 423181 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| ||||| || || || ||||| | || ||| || | | |||||| Sbjct 423182 AGGCGGCCCTTGTCATTGGTGATGGTGATCTTGTTGGCTTTGCCAGTGCTCTTATCGGTG 423241 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || | ||||||| || || || ||||| | || || | || | ||| || || Sbjct 423242 GCCGTGACATTCAGGATGCCGTTGGCATCGATGTCAAAAGTCACCTCAATCTGAGGAACT 423301 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 ||||| ||||| | || || || || | ||||| || || ||| |||| || Sbjct 423302 CCCCTGGGTGCAGGAGGGATTCCAGTCAGGTCAAAGCGCCCCAGCAAATTGTTGTCTCGG 423361 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | | | | ||||| ||||| || | || ||| |||| || |||||| Sbjct 423362 GTCATGGCCCTCTCACCCTCATATACCTGGATCAGGACCCCAGGCTGGTTATCTGAGTAG 423421 Query 6869 GTTGAGAAGATTTGT-TCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGG-- 6925 || | ||||| ||| ||| | || | || || || | ||| | | | | | || Sbjct 423422 GTGGTAAAGATCTGTGTCTGT-TTGGTGGGGATGGTAGAATTAC---GTTTGATCAGGAC 423477 Query 6926 -GTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAA 6984 ||||| | || || ||||| | || || |||| || | ||||||||| | | Sbjct 423478 AGTCATCACGCCCCCAGCTGTTTCCAAACCTAGGGACAAGGGAGCCACGTCCAACAAAAG 423537 Query 6985 CAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCC 7044 |||||| || || ||| | |||||| | || || || || || || | ||||| Sbjct 423538 CAGGTCCTGTACCTTTTCAGACTTGTCACCCATCAAAATCGCTGCCTGTACTGCAGCCCC 423597 Query 7045 GTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATC 7104 || || || |||||||| ||||| || | || || || || ||| ||||| || || Sbjct 423598 ATAGGCTACTGCCTCATCAGGGTTGATGCTCTTGTTGAGCTCACGACCATTAAAGTAGTC 423657 Query 7105 CGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATT 7164 | | | | || | || ||||| || || || || || |||||||| || |||| Sbjct 423658 CTGCAGTAGTCTCTGTACCTTGGGGATACGGGTGGAGCCCCCTACCAAAACAATGTCATG 423717 Query 7165 CACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA---TACA 7221 | ||| | |||||| ||||| | || || || | || || ||||| |||| ||| Sbjct 423718 GATTTTAGCTTTATCCATCTTAGCATCACGCAGAGCCTTCTCCACAGGCTCCAAGGTACC 423777 Query 7222 TTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAA 7281 || |||||||| ||||| || ||||| || || | |||||||||||||||||| Sbjct 423778 CCTA---AACAAGTCTGCACACAACTCTTCAAACCGAGCTCTGGTAATGGATGTATAGAA 423834 Query 7282 ATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTG---TTTGTGCCGTCGAAGATAA 7338 |||| ||| || ||| || || || || | ||||| | |||| | || || | Sbjct 423835 GTCAATGCCCTCAAATAGGGAGTCGATCTCCA-GGTTGGCCTGGGTGC--TGGATGACAG 423891 Query 7339 CGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGA 7398 || | ||| || | ||| || || || || | | | | || ||| ||| | Sbjct 423892 GGTCCTCTTGGCCCTCTCGCAGGCAGTGCGCAGCCTCCTCACAGCTCGCTTGTTCTGGCT 423951 Query 7399 AATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATC 7458 || || ||||| || || | || ||||| || |||||| | | | || || Sbjct 423952 GATGTCCTTCTTGTGCTTCCTCTTGAACTCCTCCACGAAGTGGCTCACCAACCTGTTGTC 424011 Query 7459 GAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCC 7518 || || || ||||||| ||| || ||||| || || ||||| || ||||| ||||| | Sbjct 424012 AAAGTCCTCCCCACCCAGGTGGGTGTCCCCGGCAGTGGCTTTCACCTCAAAAATACCATC 424071 Query 7519 TTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT- 7577 || || ||| | || |||||||||||||| ||||| || ||||| || || |||| Sbjct 424072 ATCTATAGTTAGAATGGACACATCAAACGTACCTCCACCTAGATCAAAGATCAGGACGTG 424131 Query 7578 TCG-TATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 ||| | || | | | | ||||| | |||||| || || || || || || |||||| Sbjct 424132 TCGCTCTCCATGACCTCCT--TTATCTAAACCGTAGGCAATGGCAGCAGCTGTGGGTTCA 424189 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || || | || ||| || || |||||| ||||||| || || || || ||| Sbjct 424190 TTGATGATTCTTAGCACGTTGAGTCCTGCAATAACACCCGCATCCTTGGTGGCCTGGCGT 424249 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || || || || ||||| || || || | || || | || || | | || | | Sbjct 424250 TGTGAGTCATTGAAATAGGCTGGCACTGTGATCACAGCATTGGTAACAGTGTGCCCCAAA 424309 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 | | || || | || ||||| || || || ||||| || || || || |||| Sbjct 424310 AAAGCCTCAGCAGTCTCCTTCATCTTAGTCAGCACCATAGAAGAGATTTCCTCAGGATAG 424369 Query 7817 AACTGTTTCGTTTCACCGTTA----AAATCAACTTCAATCATGGGTTTATCCGCAGCACC 7872 || ||| |||| || ||| | | |||| | | |||| || || | || Sbjct 424370 AAGGCTTTATTTTCTCCTTTATAGGACACCAAC----ACCTTGGGCTTGCCCCCCTCA-- 424423 Query 7873 GGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTT 7932 || || | | | | |||| ||||||||| || ||| | || ||| || Sbjct 424424 -TTAATCACTTGAAAAGGCCAAAGTTTCATATCTGACTGCACCACAGGATCATTAAATTT 424482 Query 7933 TCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTT 7992 |||||||| | ||| || |||||||| || ||||| | ||| ||||||||| ||||| Sbjct 424483 CCTTCCGATCAAACGTTTGGCATCAAAGACAGTGTTCTGGGGATTCATGGCTACCTGGTT 424542 Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052 ||| || || ||||| || || ||||| | || || || || ||||| ||||| Sbjct 424543 CTTGGCTGCATCCCCTATGAGTCGTTC---GGTGTCGGTGAAGGCCACGTAGCTGGGGGT 424599 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112 || || || || |||||||| || || || || || | ||| || | || || || Sbjct 424600 GGTGCGGTTGCCCTGGTCGTTGGCGATGATCTCCACCTTGCCGTGCTGGAACACCCCCAC 424659 Query 8113 GCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 ||||| || || || || | || || ||||| || Sbjct 424660 ACACGAGTAGGTGGTGCCCAGGTCGATGCCGATGGC 424695 Score = 250 bits (276), Expect = 3e-61 Identities = 797/1228 (65%), Gaps = 16/1228 (1%) Strand=Plus/Minus Query 6926 GTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAAC 6985 ||||| | || ||| || || || || || ||||| || | |||||||| || | | Sbjct 427301 GTCATCACGCCTCCCGCTGTCTCCAGACCCAGCGACAGCGGAGCCACGTCCAGCAGCAGC 427242 Query 6986 AGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 ||||| || || ||| || ||| | | |||||| || || |||| |||||| Sbjct 427241 AGGTCCTGCACGTTCTCGGATTTGTCCCCCATGAGGATGGCCGCCTGCACCGCCGCCCCA 427182 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || || |||||||| |||||||| || | || || || || || || || | ||| Sbjct 427181 TAGGCCACCGCCTCGTCGGGGTTGATGCTCTTGTTGAGGTCACGCCCATTGAAGAAGTCC 427122 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 | || | || | || ||||| ||||| || || || |||| || | || | Sbjct 427121 TGCAGCAGCTTCTGCACCTTGGGGATGCGTGTGGAGCCCCCCACCAGGACCAGGTCGTGG 427062 Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225 | | | || || | ||| | || || || | ||| || ||||| |||| | Sbjct 427061 ATCTGTGCCTTGTCCAGCTTGGCATCGCGCAGAGCTTTCTCCACAGGCTCCAGGGTGCTG 427002 Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 ||||||| |||| ||||| ||||| || || || | || ||||| || ||||| ||| Sbjct 427001 CGGAACAGGTCCGAGCACAGCTCCTCGAAGCGCGCCCTCGTGATGGACGTGTAGAAGTCA 426942 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345 | ||| || | | || || || || | | | | || | | ||||| | || | | Sbjct 426941 ATGCCCTCAAACAGGGAGTCGATCTCCAGGCTGGCCTGGGTGCTGGAAGACAGGGTCCTC 426882 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405 || || | ||| || || || || | || | | || ||| ||| | || ||| Sbjct 426881 TTGGCCCTCTCGCAGGCAGTGCGCAGCCGCCTGACAGCCCGCTTGTTCTGGCTGATGTCT 426822 Query 7406 TTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCT 7465 ||||| || || | || ||||| || |||||| | | || || || || || Sbjct 426821 TTCTTGTGCTTCCTCTTGAACTCCTCCACGAAGTGGCTCACCAGCCTGTTGTCAAAGTCC 426762 Query 7466 TCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATG 7525 || ||||||| ||| || ||||| || || || || || || ||||| || | || || Sbjct 426761 TCCCCACCCAGGTGGGTGTCCCCGGCCGTGGCCTTCACCTCGAAGATGCCATCGTCGATC 426702 Query 7526 TTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG 7585 | | | || || || ||||| || || ||||| ||||| ||||| ||||| || Sbjct 426701 GTCAGGATGGACACGTCGAACGTGCCGCCGCCCAGATCAAAGATGAGCACGTTG----CG 426646 Query 7586 -TCGTCTTTGTTCTTA---TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAAT 7641 || | ||| | | || || || || ||||| || |||||||| || || || || Sbjct 426645 CTCCCCCTTGCCCGTCCGGTCCAGGCCATAGGCGATGGCGGCCGCCGTGGGCTCGTTGAT 426586 Query 7642 AATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGA 7701 || | || |||||| || || || |||||||||| || || || || ||||| Sbjct 426585 GATCCTCAGCACGTTCAGCCCCGCGATCACCCCCGCATCTTTGGTGGCCTGGCGCTGCGA 426526 Query 7702 ATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGA 7761 ||||| ||||||||||| || || | ||||||| ||| || | || || |||| Sbjct 426525 GTCGTTGAAGTAGGCCGGCACGGTGATCACCGCGTTCGTCACCGGGTAGCCCAGGTACGC 426466 Query 7762 TTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTG 7821 || ||||| || ||||| ||||| || ||||| || || ||||| || | ||| Sbjct 426465 CTCGGCGATCTCCTTCATCTTGGTCAGCACCATGGACGAGATCTCCTCGGGGTAGAACGC 426406 Query 7822 TTTCGTTTCACCGTT-AAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAA 7880 ||||| || || || | ||| || | | | |||| || | ||| | || || | Sbjct 426405 CTTCGTCTCCCCCTTGTAGCTCACCTGC-ACCTTGGGCTTGT-CGC--CGTCGTTGACCA 426350 Query 7881 CCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGA 7940 | | | ||| | ||||| || || ||| |||| ||||| | |||| Sbjct 426349 CGCGGAAGGGCCAGTGCTTCATGTCTGACTGCACCACCGGGTCGCCGAACTTGCGGCCGA 426290 Query 7941 TAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCG 8000 | |||||||| || || || || ||||| | ||||||| || |||||||| |||| Sbjct 426289 TCAGACGCTTCGCGTCGAACACCGTGTTCTGCGGGTTCAGCGCCACCTGGTTCTTGGCCG 426230 Query 8001 CGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGAT 8060 | |||||||| || || || | || || || || ||||| ||||| || || | Sbjct 426229 CATCCCCGATCAGCCGCTC---GGTGTCGGTGAAGGCCACGTAGCTGGGGGTGGTGCGGT 426173 Query 8061 TCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAAT 8120 | || |||||||| || || || || || | ||| || | || || || ||||| | Sbjct 426172 TGCCCTGGTCGTTGGCGATGATCTCCACCTTGCCGTGCTGGAACACCCCCACACACGAGT 426113 Query 8121 ACGTTGTTCCTAAATCAATACCGATTGC 8148 | || || || | || || ||||| || Sbjct 426112 AGGTAGTGCCCAGGTCGATGCCGATGGC 426085 Score = 250 bits (276), Expect = 3e-61 Identities = 797/1228 (65%), Gaps = 16/1228 (1%) Strand=Plus/Minus Query 6926 GTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAAC 6985 ||||| | || ||| || || || || || ||||| || | |||||||| || | | Sbjct 449484 GTCATCACGCCTCCCGCTGTCTCCAGACCCAGCGACAGCGGAGCCACGTCCAGCAGCAGC 449425 Query 6986 AGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 ||||| || || ||| || ||| | | |||||| || || |||| |||||| Sbjct 449424 AGGTCCTGCACGTTCTCGGATTTGTCCCCCATGAGGATGGCCGCCTGCACCGCCGCCCCA 449365 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || || |||||||| |||||||| || | || || || || || || || | ||| Sbjct 449364 TAGGCCACCGCCTCGTCGGGGTTGATGCTCTTGTTGAGGTCACGCCCATTGAAGAAGTCC 449305 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 | || | || | || ||||| ||||| || || || |||| || | || | Sbjct 449304 TGCAGCAGCTTCTGCACCTTGGGGATGCGTGTGGAGCCCCCCACCAGGACCAGGTCGTGG 449245 Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225 | | | || || | ||| | || || || | ||| || ||||| |||| | Sbjct 449244 ATCTGTGCCTTGTCCAGCTTGGCATCGCGCAGAGCTTTCTCCACAGGCTCCAGGGTGCTG 449185 Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 ||||||| |||| ||||| ||||| || || || | || ||||| || ||||| ||| Sbjct 449184 CGGAACAGGTCCGAGCACAGCTCCTCGAAGCGCGCCCTCGTGATGGACGTGTAGAAGTCA 449125 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345 | ||| || | | || || || || | | | | || | | ||||| | || | | Sbjct 449124 ATGCCCTCAAACAGGGAGTCGATCTCCAGGCTGGCCTGGGTGCTGGAAGACAGGGTCCTC 449065 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405 || || | ||| || || || || | || | | || ||| ||| | || ||| Sbjct 449064 TTGGCCCTCTCGCAGGCAGTGCGCAGCCGCCTGACAGCCCGCTTGTTCTGGCTGATGTCT 449005 Query 7406 TTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCT 7465 ||||| || || | || ||||| || |||||| | | || || || || || Sbjct 449004 TTCTTGTGCTTCCTCTTGAACTCCTCCACGAAGTGGCTCACCAGCCTGTTGTCAAAGTCC 448945 Query 7466 TCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATG 7525 || ||||||| ||| || ||||| || || || || || || ||||| || | || || Sbjct 448944 TCCCCACCCAGGTGGGTGTCCCCGGCCGTGGCCTTCACCTCGAAGATGCCATCGTCGATC 448885 Query 7526 TTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG 7585 | | | || || || ||||| || || ||||| ||||| ||||| ||||| || Sbjct 448884 GTCAGGATGGACACGTCGAACGTGCCGCCGCCCAGATCAAAGATGAGCACGTTG----CG 448829 Query 7586 -TCGTCTTTGTTCTTA---TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAAT 7641 || | ||| | | || || || || ||||| || |||||||| || || || || Sbjct 448828 CTCCCCCTTGCCCGTCCGGTCCAGGCCATAGGCGATGGCGGCCGCCGTGGGCTCGTTGAT 448769 Query 7642 AATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGA 7701 || | || |||||| || || || |||||||||| || || || || ||||| Sbjct 448768 GATCCTCAGCACGTTCAGCCCCGCGATCACCCCCGCATCTTTGGTGGCCTGGCGCTGCGA 448709 Query 7702 ATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGA 7761 ||||| ||||||||||| || || | ||||||| ||| || | || || |||| Sbjct 448708 GTCGTTGAAGTAGGCCGGCACGGTGATCACCGCGTTCGTCACCGGGTAGCCCAGGTACGC 448649 Query 7762 TTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTG 7821 || ||||| || ||||| ||||| || ||||| || || ||||| || | ||| Sbjct 448648 CTCGGCGATCTCCTTCATCTTGGTCAGCACCATGGACGAGATCTCCTCGGGGTAGAACGC 448589 Query 7822 TTTCGTTTCACCGTT-AAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAA 7880 ||||| || || || | ||| || | | | |||| || | ||| | || || | Sbjct 448588 CTTCGTCTCCCCCTTGTAGCTCACCTGC-ACCTTGGGCTTGT-CGC--CGTCGTTGACCA 448533 Query 7881 CCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGA 7940 | | | ||| | ||||| || || ||| |||| ||||| | |||| Sbjct 448532 CGCGGAAGGGCCAGTGCTTCATGTCTGACTGCACCACCGGGTCGCCGAACTTGCGGCCGA 448473 Query 7941 TAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCG 8000 | |||||||| || || || || ||||| | ||||||| || |||||||| |||| Sbjct 448472 TCAGACGCTTCGCGTCGAACACCGTGTTCTGCGGGTTCAGCGCCACCTGGTTCTTGGCCG 448413 Query 8001 CGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGAT 8060 | |||||||| || || || | || || || || ||||| ||||| || || | Sbjct 448412 CATCCCCGATCAGCCGCTC---GGTGTCGGTGAAGGCCACGTAGCTGGGGGTGGTGCGGT 448356 Query 8061 TCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAAT 8120 | || |||||||| || || || || || | ||| || | || || || ||||| | Sbjct 448355 TGCCCTGGTCGTTGGCGATGATCTCCACCTTGCCGTGCTGGAACACCCCCACACACGAGT 448296 Query 8121 ACGTTGTTCCTAAATCAATACCGATTGC 8148 | || || || | || || ||||| || Sbjct 448295 AGGTAGTGCCCAGGTCGATGCCGATGGC 448268 >seq3 Length=4708640 Score = 188 bits (208), Expect = 9e-43 Identities = 365/539 (68%), Gaps = 0/539 (0%) Strand=Plus/Minus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || || || || || |||||||| |||||||| | || |||| |||||| || || || Sbjct 2000815 GCACCATAAGCAACAGCCTCATCAGGGTTAATGCTCTTGTTCAATTCTTTTCCATTGAAG 2000756 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 ||||| | || || ||||| || || || || || || || || || | ||| || Sbjct 2000755 AAATCCTGAAGCAGTTTCTGAATCTTAGGAATACGGGTAGAGCCGCCCACGAGAACAATG 2000696 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 |||| | | || || || | ||| | || | || | ||| || ||||| |||| | Sbjct 2000695 TCATGTATCTGAGACTTGTCTAGCTTGGCATCCCTCAGGGCTTTCTCCACAGGGTCCAGA 2000636 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 |||||| | ||| | || ||| ||||| || |||||||||||||| ||||| Sbjct 2000635 GTGCCACGGAAGAGGTCAGCATTCAATTCTTCAAATCGAGCACGGGTAATGGAGGTATAA 2000576 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || || | || || || | || ||||| || || | | || | | || || | Sbjct 2000575 AAGTCGATTCCTTCATAGAGAGAGTCAATCTCGATACTGGCCTGGGTGCTGGAGGACAGA 2000516 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || || ||||| || ||||| || || || | ||||||| || | | ||| | | Sbjct 2000515 GTACGTTTTGCACGTTCACAAGCAGTACGGAGGCGACGAACAGCCCTCTTGTTCTCAGTG 2000456 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCG 7459 || || ||||||||||| || || ||||| || ||||| | | || ||| Sbjct 2000455 ATGTCCTTCTTATGTTTGCGCTTGAACTCAGCAATAAAGTGATTCACCATCCTGTTATCA 2000396 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 |||||||| ||||||||||| ||||| || || || | |||||| |||||||| || || Sbjct 2000395 AAATCTTCTCCACCCAAGTGGGTATCTCCAGCTGTGGATTTGACCTCAAAGATTCCATCT 2000336 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT 7578 ||||| | | | || ||||| || || ||||| |||| ||||| || || || || Sbjct 2000335 TCAATAGTGAGGATTGACACATCGAAAGTGCCACCTCCCAAATCAAAGATCAGCACATT 2000277 Score = 82.4 bits (90), Expect = 1e-10 Identities = 100/136 (74%), Gaps = 3/136 (2%) Strand=Plus/Minus Query 7953 CATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAA 8012 || ||||||||||||| |||| ||||| ||| ||| ||||| || || || ||||| | Sbjct 1999347 CACCAAAAACTGTGTTAGTGGGATTCATAGCTACTTGATTCTTTGCAGCATCACCGATCA 1999288 Query 8013 GACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGT 8072 |||||| || || ||||| || || || |||||| ||||| || || || || | Sbjct 1999287 ATCGTTCAGTA---TCAGTAAAAGCAACATAGCTTGGGGTGGTTCGGTTGCCCTGATCAT 1999231 Query 8073 TCGCAATAATTTCTAC 8088 | ||||| || || || Sbjct 1999230 TTGCAATTATCTCCAC 1999215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634611244822960