Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Procavia_20capensis_20[genbank_20GCA_5F000152225.2_202014-12-16] 65,694 sequences; 3,602,182,911 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2227 149 8e-30 seq1874 143 3e-28 seq597 143 3e-28 seq2724 134 2e-25 seq4975 131 2e-24 seq604 131 2e-24 seq24691 122 1e-21 seq3051 91.5 2e-12 seq1570 91.5 2e-12 >seq2227 Length=469810 Score = 149 bits (164), Expect = 8e-30 Identities = 154/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 80128 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 80187 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| | ||||||| |||| | Sbjct 80188 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGAGACGCCTCGCCGGCGATGCGCTCGAAGA 80247 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| |||||||| Sbjct 80248 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 80307 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 80308 GGACCTGCTTCAGCACCTTGTA 80329 Score = 149 bits (164), Expect = 8e-30 Identities = 154/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 124316 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGAGACGTGA 124257 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| | ||||||| |||| | Sbjct 124256 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGAGACGCCTCGCCGGCGATGCGCTCGAAGA 124197 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||| | ||| | |||| |||||||| |||||||| Sbjct 124196 TGTCGTTGACGAACGAGTTCATAATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 124137 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 124136 GGACCTGCTTCAGCACCTTGTA 124115 Score = 143 bits (158), Expect = 3e-28 Identities = 153/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 27919 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 27860 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || ||||| ||||||| |||| | Sbjct 27859 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGAGACGCCTCCCCCGCGATGCGCTCGAAGA 27800 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 27799 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 27740 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 27739 GGACCTGCTTCAGCACCTTGTA 27718 Score = 140 bits (154), Expect = 4e-27 Identities = 152/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 50530 GCTTGGCCAACTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 50471 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| | ||||||| |||| | Sbjct 50470 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGAGACGCCTCGCCGGCGATGCGCTCGAAGA 50411 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| ||||||| Sbjct 50410 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCAGTATCGGGGT 50351 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 50350 GGACCTGCTTCAGCACCTTGTA 50329 Score = 140 bits (154), Expect = 4e-27 Identities = 152/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 67624 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 67565 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || ||||| ||||||| |||| | Sbjct 67564 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGAGACGCCTCCCCCGCGATGCGCTCGAAGA 67505 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| |||||||| Sbjct 67504 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 67445 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 67444 GGACCTGCTTCAGCACCTTGTA 67423 >seq1874 Length=500210 Score = 143 bits (158), Expect = 3e-28 Identities = 153/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 372030 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 371971 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || ||||| ||||||| |||| | Sbjct 371970 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGAGACGCCTCCCCCGCGATGCGCTCGAAGA 371911 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 371910 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 371851 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 371850 GGACCTGCTTCAGCACCTTGTA 371829 Score = 143 bits (158), Expect = 3e-28 Identities = 153/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 388681 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 388740 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || ||||| ||||||| |||| | Sbjct 388741 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGAGACGCCTCCCCCGCGATGCGCTCGAAGA 388800 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 388801 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 388860 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 388861 GGACCTGCTTCAGCACCTTGTA 388882 Score = 140 bits (154), Expect = 4e-27 Identities = 152/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 412405 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 412346 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| | ||||||| || | | Sbjct 412345 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGAGACGCCTCGCCGGCGATGCGCTCAAAAA 412286 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| |||||||| Sbjct 412285 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 412226 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| || |||||||| Sbjct 412225 GGACCTGCTTCAGTACCTTGTA 412204 Score = 136 bits (150), Expect = 5e-26 Identities = 154/206 (75%), Gaps = 8/206 (4%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 342119 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 342060 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACG----GCCGGCCTCGGTGCCGATGCGGTCG 1254458 | || ||||||||| | |||||||| || ||| || || ||||||| ||| Sbjct 342059 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGAGACGCCTACCCCG----CGATGCGCTCG 342004 Query 1254459 ATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCG 1254518 | ||||||||||| ||||||||||||| ||| | |||| |||||||| ||| Sbjct 342003 AAGATGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCC 341944 Query 1254519 GGGTGCACCTGCTTGAGCACCTTGTA 1254544 ||||| |||||||| ||||||||||| Sbjct 341943 GGGTGGACCTGCTTCAGCACCTTGTA 341918 Score = 125 bits (138), Expect = 9e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 332180 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 332239 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || ||||| || ||||| ||||||| |||| | Sbjct 332240 TGGTCGAGCGCTTGTTGTAATGTGCCAGGCGAGATGCCTCCCCCGCGATGCGCTCGAAGA 332299 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | ||| || ||||| ||| |||| Sbjct 332300 TGTCGTTGACGAACGAGTTCATGATGCCCATAGCTTTGGACGATATGCCGGTGTCCGGGT 332359 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 332360 GGACCTGCTTTAGCACCTTGTA 332381 >seq597 Length=1010878 Score = 143 bits (158), Expect = 3e-28 Identities = 153/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 991156 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 991215 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || ||||| ||||||| |||| | Sbjct 991216 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGAGACGCCTCCCCCGCGATGCGCTCGAAAA 991275 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 991276 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGAAGAGATGCCGGTGTCGGGGT 991335 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 991336 GGACCTGCTTCAGCACCTTGTA 991357 Score = 125 bits (138), Expect = 9e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 870476 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 870535 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || ||||| ||||||| |||| | Sbjct 870536 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGAGACGCCTCCCCCGCGATGCGCTCGAAGA 870595 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| ||| |||| Sbjct 870596 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 870655 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||| || || Sbjct 870656 GGACCTGCTTCAGCACTTTATA 870677 Score = 123 bits (136), Expect = 3e-22 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 436095 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 436036 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || ||||| ||||||| |||| | Sbjct 436035 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGAGACGCCTCCCCCGCGATGCGCTCGAAGA 435976 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||||| || ||||||| ||| | ||| ||||| || ||| |||| Sbjct 435975 TGTCAGTGACAAAAGAATTCATGATGCTCATGGCCTTAGAAGAGATACCAGTGTCCGGGT 435916 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||| ||||||||||||||| Sbjct 435915 GGACCTGCTTCAGCACCTTGTAGATG 435890 >seq2724 Length=624619 Score = 134 bits (148), Expect = 2e-25 Identities = 151/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || ||| ||| | ||||||||| || ||||||||||| || | || Sbjct 312720 GCTTGGCCAACTCCCCGGGCAGCAGCAGGCGCACAGCCGTCTGGATCTCCCGGGACGTGA 312661 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| | ||||||| |||| | Sbjct 312660 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGAGACGCCTCGCCGGCGATGCGCTCGAAGA 312601 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| || |||| Sbjct 312600 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTATCTGGGT 312541 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 312540 GGACCTGCTTCAGCACCTTGTA 312519 Score = 134 bits (148), Expect = 2e-25 Identities = 151/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | | |||||||||||| ||||||||||| || | || Sbjct 337196 GCTTGGCCAGCTCCCCGGGAAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 337137 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || ||||| || |||||| | ||||||| |||| | Sbjct 337136 TGGTCGAGCGCTTGTTGTAATGTGCCAGGCGAGATGCCTCGCCGGCGATGCGCTCGAAGA 337077 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | ||| || ||||| |||||||| Sbjct 337076 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCTTTGGACGATATGCCGGTGTCGGGGT 337017 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 337016 GGACCTGCTTCAGCACCTTGTA 336995 >seq4975 Length=162666 Score = 131 bits (144), Expect = 2e-24 Identities = 150/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | ||| ||||| || ||||| | ||| || | || Sbjct 15890 GCTTGGCCAGCTCCCCAGGCAGCAGCAGACGCACAGCCGTCTGCACCTCTCGGGACGTGA 15831 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| ||| ||||||| || ||||||| |||| | Sbjct 15830 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCGAAGA 15771 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || |||||||||| ||| | |||| |||||||| || |||| Sbjct 15770 TGTCGTTAACGAAAGAGTTCATGATGCCCATAGCCTTGGACGAGATGCCGGTATCCGGGT 15711 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| | ||||||||| Sbjct 15710 GCACCTGCTTCAACACCTTGTA 15689 >seq604 Length=1463524 Score = 131 bits (144), Expect = 2e-24 Identities = 154/205 (75%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCC--GATCG 1254405 ||||| |||||| | | | |||||||||||| ||||||||||| || ||| | ||| | Sbjct 1299254 GCCAGCTCGCCGGGTAGCAGCAGGCGCACGGCCGTCTGGATCTC-CG-GTGACGTGATGG 1299311 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 || ||||||||| | || ||||| ||| || || ||||||| |||| ||| Sbjct 1299312 TGGAGCGCTTGTTATAATGTGCCAGGCGGGATGCTTCCCCCGCGATGCGCTCGAAAGTGT 1299371 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||| || |||||||||| ||| | |||| |||||||| ||| ||||||| Sbjct 1299372 CGTTGACGAAAGAGTTCATGATGCTCATGGCCTTGGATGAGATGCCGGTGTCAGGGTGCA 1299431 Query 1254526 CCTGCTTGAGCACCTTGTAGATGAA 1254550 ||||||| ||||||||||| | ||| Sbjct 1299432 CCTGCTTCAGCACCTTGTACACGAA 1299456 Score = 125 bits (138), Expect = 9e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| |||||| ||| | ||||||||| || ||||||||||| || | || Sbjct 1261422 GCTTGGCCAATTCGCCCGGCAGCAGCAGGCGCACAGCCGTCTGGATCTCCCGAGATGTGA 1261363 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || || ||||| | ||||||||||| || || | ||||||| |||| | Sbjct 1261362 TAGTCGATCGTTTGTTGTAATGCGCCAGACGAGACGCTTCACCGGCGATGCGCTCGAAGA 1261303 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| | ||| | ||| |||||||| |||||||| Sbjct 1261302 TGTCGTTGACGAAAGAGTTCATGATCCCCATGGCCTTAGACGAGATGCCGGTGTCGGGGT 1261243 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| | ||||||||| Sbjct 1261242 GGACCTGCTTCAACACCTTGTA 1261221 Score = 125 bits (138), Expect = 9e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | ||||| || || ||||||||||| || | || Sbjct 1320967 GCTTGGCCAGCTCGCCGGGCAGCAGGAGGCGGACAGCCGTCTGGATCTCTCGGGACGTGA 1320908 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| ||| || || | ||||||| |||| | Sbjct 1320907 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCTTCCCCGGCGATGCGTTCGAAAA 1320848 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| ||| |||| Sbjct 1320847 TGTCGTTGACGAAAGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCAGTGTCAGGGT 1320788 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| | ||||||||| Sbjct 1320787 GGACCTGCTTCAACACCTTGTA 1320766 Score = 100 bits (110), Expect = 3e-15 Identities = 144/202 (71%), Gaps = 1/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| ||||| ||| | |||||||||||| |||||||||| || | || Sbjct 1286594 GCTTGGCCAGCTCGCCAGGCAGCAGCAGGCGCACGGCCATCTGGATCTC-CGAGATGTGA 1286536 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | | ||||||||| | |||||||| ||| || || || | ||||| |||| | Sbjct 1286535 TGGCAGAGCGCTTGTTGTAATGCGCCAGGCGGAACGCTTCACTGGCTATGCGCTCGAAGA 1286476 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| ||| ||| ||| || |||| Sbjct 1286475 TGTCGTTGACGAAGGAGTTCATGATACCCATGACCTTAGACAAGACGCCAGTATCTGGGT 1286416 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||| ||||| Sbjct 1286415 GGACCTGCTTCAGCACTTTGTA 1286394 >seq24691 Length=4637 Score = 122 bits (134), Expect = 1e-21 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | |||||||||||| ||||||||||| || | || Sbjct 470 GCTTGGCCAGCTCCCCAGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 529 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || ||||| || ||||| ||||||| |||| | Sbjct 530 TGGTTGAGCGCTTGTTGTAATGTGCCAGGCGAGATGCCTCCCCCGCGATGCGCTCGAAGA 589 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| || ||||||| ||| | ||| || ||||| |||||||| Sbjct 590 TGTCGTTGACAAATGAATTCATGATGCCCATAGCTTTGGACGATATGCCGGTGTCGGGGT 649 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 650 GGACCTGCTTCAGCACCTTGTA 671 >seq3051 Length=368617 Score = 91.5 bits (100), Expect = 2e-12 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || |||||| | |||||||| | |||| ||| || |||||| |||| || || Sbjct 338327 GCTGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTTACATGCAAGACTGTTGCTAAT 338386 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAA 1592295 ||||||||||| ||| | || ||||||||||||||||| || || ||||| Sbjct 338387 ATGATCAAGGGGAAGACTCCTGAGGAGATCCGCAAGACTTTCAATATCAA 338436 >seq1570 Length=782280 Score = 91.5 bits (100), Expect = 2e-12 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 507107 CGGTTCAAGGGCAAGGAGGGTAGGATCCGCGGCAATTGCATGGGCAAGCGCGTCAACTTT 507166 ||||| ||||||||||| || || | || || || ||||||||||| ||| |||| Sbjct 58538 CGGTTAAAGGGCAAGGAAGGCCGGGTACGAGGGAACCTGATGGGCAAGCGTGTCGACTTC 58479 Query 507167 ACCGCGCGCGCCGTCATCAGCCCCGACCCCGAGATCGACATTGACGAGGTGGGCGTGCCC 507226 | || ||| | ||||||| |||||||||| | || ||||||| |||| ||||||||| Sbjct 58478 TCAGCCCGCACAGTCATCACCCCCGACCCCAACCTCTCCATTGACCAGGTTGGCGTGCCC 58419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6101748042714998