Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Procavia_20capensis_20[genbank_20GCA_5F000152225.2_202014-12-16] 65,694 sequences; 3,602,182,911 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq2054 89.7 5e-13 >seq2054 Length=1030836 Score = 89.7 bits (98), Expect = 5e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 133311 AGCTCCAGGAACGCGGTGTGTACAAGGCCATGAGCGAGTTCGACATCTTCATCAACTACA 133370 ||||||| || ||||| |||||||||||||| ||||| |||||||| |||||||||| Sbjct 302576 AGCTCCAAGAGAAAGGTGTCTACAAGGCCATGAGTGAGTTTGACATCTTTATCAACTACA 302517 Query 133371 TAGAGACATATACCACCATGAA 133392 |||| || ||||| || ||||| Sbjct 302516 TAGAAACCTATACAACAATGAA 302495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447443468637840