Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Procavia_20capensis_20[genbank_20GCA_5F000152225.2_202014-12-16] 65,694 sequences; 3,602,182,911 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2227 176 6e-38 seq2724 170 3e-36 seq1874 170 3e-36 seq597 158 2e-32 seq24691 149 9e-30 seq4975 149 9e-30 seq604 140 5e-27 seq1570 91.5 2e-12 >seq2227 Length=469810 Score = 176 bits (194), Expect = 6e-38 Identities = 177/229 (77%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| |||| |||| || |||| ||||| Sbjct 80329 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 80276 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| | |||||| |||| Sbjct 80275 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCGTCTCGC 80216 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | || ||||||||||| ||||||||| Sbjct 80215 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 80156 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 80155 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 80107 Score = 172 bits (190), Expect = 8e-37 Identities = 175/227 (77%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| |||| |||| || |||| ||||| Sbjct 124115 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 124168 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 || ||||||||||| ||||||||||| |||| ||||||| | |||||| |||| Sbjct 124169 GGCATTATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCGTCTCGC 124228 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | || ||||||||||| ||||||||| Sbjct 124229 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCTCGGGAGATCCAGACGGCCGTGCGC 124288 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 ||| | ||| ||| || ||||||| ||||||||| ||||||||||| Sbjct 124289 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCAC 124335 Score = 170 bits (188), Expect = 3e-36 Identities = 176/229 (77%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| |||| |||| || |||| ||||| Sbjct 27718 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 27771 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| ||||| |||| Sbjct 27772 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGGGAGGCGTCTCGC 27831 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | || ||||||||||| ||||||||| Sbjct 27832 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 27891 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 27892 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 27940 Score = 170 bits (188), Expect = 3e-36 Identities = 177/229 (77%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| || ||| |||| || |||| ||||| Sbjct 50329 TACAAGGTGCTGAAGCAGGTCCACCCCGATAC---TGG--CATC-TCGTCCAAGGCCATG 50382 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| | |||||| |||| Sbjct 50383 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCGTCTCGC 50442 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | || ||||||||||| ||||||||| Sbjct 50443 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 50502 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| || |||||| ||||||||| ||||||||||||| Sbjct 50503 CTGCTGCTGCCCGGGGAGTTGGCCAAGCACGCCGTGTCCGAGGGCACCA 50551 Score = 161 bits (178), Expect = 1e-33 Identities = 174/229 (76%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| |||| |||| || |||| ||||| Sbjct 67423 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 67476 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| ||||| |||| Sbjct 67477 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGGGAGGCGTCTCGC 67536 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | || ||||||||||| ||||||||| Sbjct 67537 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 67596 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| || ||||||| ||||||||| ||||| ||||||| Sbjct 67597 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAAGGCACCA 67645 >seq2724 Length=624619 Score = 170 bits (188), Expect = 3e-36 Identities = 177/229 (77%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| |||| | ||| ||||| || ||||| Sbjct 336995 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCG---GCATATCGTCCAA--AG-CCATG 337048 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| | |||||| |||| Sbjct 337049 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCATCTCGC 337108 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | |||||||||| || ||| | || ||||||||||| ||||||||| Sbjct 337109 CTGGCACATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 337168 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | | | ||| || ||||||| ||||||||| ||||||||||||| Sbjct 337169 CTGCTGCTTCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 337217 Score = 167 bits (184), Expect = 3e-35 Identities = 175/229 (76%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| ||||| |||| |||| || |||| ||||| Sbjct 312519 TACAAGGTGCTGAAGCAGGTCCACCCAGATACCGG-----CATC-TCGTCCAAGGCCATG 312572 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| | |||||| |||| Sbjct 312573 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCGTCTCGC 312632 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | || ||||||||||| || |||||| Sbjct 312633 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCTGTGCGC 312692 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| || |||||| ||||||||| ||||||||||||| Sbjct 312693 CTGCTGCTGCCCGGGGAGTTGGCCAAGCACGCCGTGTCCGAGGGCACCA 312741 >seq1874 Length=500210 Score = 170 bits (188), Expect = 3e-36 Identities = 176/229 (77%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| |||| |||| || |||| ||||| Sbjct 371829 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 371882 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| ||||| |||| Sbjct 371883 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGGGAGGCGTCTCGC 371942 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | || ||||||||||| ||||||||| Sbjct 371943 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 372002 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 372003 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 372051 Score = 167 bits (184), Expect = 3e-35 Identities = 175/229 (76%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| |||| |||| || |||| ||||| Sbjct 388882 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 388829 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| ||||| |||| Sbjct 388828 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGGGAGGCGTCTCGC 388769 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | || ||||||||||| ||||||||| Sbjct 388768 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 388709 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| || ||||||| ||||||||| ||||| ||||||| Sbjct 388708 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAAGGCACCA 388660 Score = 167 bits (184), Expect = 3e-35 Identities = 175/229 (76%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||| || |||||||| |||||| |||| |||| || |||| ||||| Sbjct 412204 TACAAGGTACTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 412257 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| | || ||||||| | |||||| |||| Sbjct 412258 GGCATCATGAACTCCTTCGTCAACGACATTTTTGAGCGCATCGCCGGCGAGGCGTCTCGC 412317 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | || ||||||||||| ||||||||| Sbjct 412318 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 412377 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 412378 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 412426 Score = 158 bits (174), Expect = 2e-32 Identities = 173/229 (76%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| ||||| |||| |||| || |||| ||||| Sbjct 341918 TACAAGGTGCTGAAGCAGGTCCACCCGGACACCGG-----CATC-TCGTCCAAGGCCATG 341971 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| |||| |||| Sbjct 341972 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGGTAGGCGTCTCGC 342031 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | || ||||||||||| ||||||||| Sbjct 342032 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 342091 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| || ||||||| |||||| || ||||||||||||| Sbjct 342092 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCTGTGTCCGAGGGCACCA 342140 Score = 149 bits (164), Expect = 9e-30 Identities = 172/229 (75%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| ||||| |||| | ||| ||||| || | ||| Sbjct 332381 TACAAGGTGCTAAAGCAGGTCCACCCGGACACCG---GCATATCGTCCAA--AG-CTATG 332328 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| ||||| |||| Sbjct 332327 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGGGAGGCATCTCGC 332268 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | |||||||||| || ||| | || ||||||||||| ||||||||| Sbjct 332267 CTGGCACATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 332208 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| || ||||||| |||||| || ||||| ||||||| Sbjct 332207 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCTGTGTCCGAAGGCACCA 332159 >seq597 Length=1010878 Score = 158 bits (174), Expect = 2e-32 Identities = 173/229 (76%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| |||| |||| || |||| ||||| Sbjct 991357 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCTTCCAAGGCCATG 991304 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| ||||| |||| Sbjct 991303 GGCATCATGAACTCGTTCGTCAACGACATTTTCGAGCGCATCGCGGGGGAGGCGTCTCGC 991244 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | || ||||||||||| ||||||||| Sbjct 991243 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 991184 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| || ||||||| |||||| || || ||||| |||| Sbjct 991183 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCAGTGTCAGAGGGTACCA 991135 Score = 152 bits (168), Expect = 7e-31 Identities = 172/229 (75%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 || || ||||| |||||||| ||||| |||| |||| || |||| ||||| Sbjct 870677 TATAAAGTGCTGAAGCAGGTCCACCCGGACACCGG-----CATC-TCGTCCAAGGCCATG 870624 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| ||||| |||| Sbjct 870623 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGGGAGGCGTCTCGC 870564 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | || ||||||||||| ||||||||| Sbjct 870563 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 870504 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 870503 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 870455 Score = 149 bits (164), Expect = 9e-30 Identities = 173/232 (75%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||||||||| |||||||| ||||| || | | ||| || ||| || Sbjct 435891 ATCTACAAGGTGCTGAAGCAGGTCCACCCGGACACTGGT-----ATC-TCTTCTAAGGCC 435944 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| |||||||| || ||||||| ||||| |||| ||||||| ||||| | Sbjct 435945 ATGAGCATCATGAATTCTTTTGTCACTGACATCTTCGAGCGCATCGCGGGGGAGGCGTCT 436004 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 |||||||||| | |||||||||| || ||| | || ||||||||||| |||||| Sbjct 436005 CGCCTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTG 436064 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||||| | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 436065 CGCCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 436116 >seq24691 Length=4637 Score = 149 bits (164), Expect = 9e-30 Identities = 172/229 (75%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| |||| | ||| ||||| || | ||| Sbjct 671 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCG---GCATATCGTCCAA--AG-CTATG 618 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||| || |||||||||||||| |||| ||||||| ||||| |||| Sbjct 617 GGCATCATGAATTCATTTGTCAACGACATCTTCGAGCGCATCGCGGGGGAGGCATCTCGC 558 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | |||||||||| || ||| | || ||||||||||| ||||||||| Sbjct 557 CTGGCACATTACAACAAGCGCTCAACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 498 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| || || ||||||| ||||||||| || |||||||||| Sbjct 497 CTGCTGCTGCCTGGGGAGCTGGCCAAGCACGCCGTGTCTGAGGGCACCA 449 >seq4975 Length=162666 Score = 149 bits (164), Expect = 9e-30 Identities = 171/229 (75%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||| | |||||||||||||| |||| |||| || |||| | ||| Sbjct 15689 TACAAGGTGTTGAAGCAGGTGCACCCGGATACCGG-----CATC-TCGTCCAAGGCTATG 15742 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || || |||||||| |||| ||||||| || ||||||| ||| Sbjct 15743 GGCATCATGAACTCTTTCGTTAACGACATCTTCGAGCGCATCGCCAGCGAGGCCTCCCGC 15802 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| || ||| | || ||| | ||||| || ||||| Sbjct 15803 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGAGAGGTGCAGACGGCTGTGCGT 15862 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| || || ||||||| ||||||||| ||||||||||||| Sbjct 15863 CTGCTGCTGCCTGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 15911 >seq604 Length=1463524 Score = 140 bits (154), Expect = 5e-27 Identities = 168/227 (74%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||| | |||||||| |||||| |||| |||| || ||| ||||| Sbjct 1261221 TACAAGGTGTTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCTAAGGCCATG 1261274 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||| || ||||||||||| |||| ||||||| | || || ||| Sbjct 1261275 GGGATCATGAACTCTTTCGTCAACGACATCTTCGAGCGCATCGCCGGTGAAGCGTCTCGT 1261334 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||| || || ||| | || ||||||||||| || |||||| Sbjct 1261335 CTGGCGCATTACAACAAACGATCGACTATCACATCTCGGGAGATCCAGACGGCTGTGCGC 1261394 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 ||| | ||| |||||| |||||| ||||||||| ||||||||||| Sbjct 1261395 CTGCTGCTGCCGGGCGAATTGGCCAAGCACGCCGTGTCCGAGGGCAC 1261441 Score = 136 bits (150), Expect = 6e-26 Identities = 168/227 (74%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||| | |||||||| ||||| || ||| |||| || |||| ||||| Sbjct 1320766 TACAAGGTGTTGAAGCAGGTCCACCCTGACAC---TGG--CATC-TCGTCCAAGGCCATG 1320819 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| | || || ||| Sbjct 1320820 GGCATCATGAACTCTTTCGTCAACGACATTTTCGAACGCATCGCCGGGGAAGCGTCCCGC 1320879 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | || ||||||||||| || || ||| Sbjct 1320880 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGAGAGATCCAGACGGCTGTCCGC 1320939 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || | ||| |||||| ||||||| ||| ||||| ||||||||||| Sbjct 1320940 CTCCTGCTGCCCGGCGAGCTGGCCAAGCATGCCGTGTCCGAGGGCAC 1320986 Score = 129 bits (142), Expect = 8e-24 Identities = 170/231 (74%), Gaps = 10/231 (4%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||||||||| |||| |||| || |||| ||||| Sbjct 1299450 TACAAGGTGCTGAAGCAGGTGCACCCTGACACCGG-----CATC-TCATCCAAGGCCATG 1299397 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || |||||||||| |||| ||||||| || || ||| Sbjct 1299396 AGCATCATGAACTCTTTCGTCAACGACACTTTCGAGCGCATCGCGGGGGAAGCATCCCGC 1299337 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATC--GGCACGCGCGAGATCCAGACCGCCGTGC 725091 ||||| | | ||||||||| ||| ||| | ||| || ||||||||||| ||||||| Sbjct 1299336 CTGGCACATTATAACAAGCGCTCCACCATCACGTCAC-CG-GAGATCCAGACGGCCGTGC 1299279 Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| | | | |||||| ||||| | || |||||||| ||| |||||| Sbjct 1299278 GCCTGCTGCTACCCGGCGAGCTGGCGAAACATGCCGTCTCTGAGAGCACCA 1299228 Score = 104 bits (114), Expect = 3e-16 Identities = 122/164 (74%), Gaps = 1/164 (1%) Strand=Plus/Plus Query 724977 ATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTG 725036 ||||||||||| || ||||||||||| |||| ||||| | || || || |||||| Sbjct 1286451 ATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATAGCCAGTGAAGCGTTCCGCCTG 1286510 Query 725037 GCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTG 725096 |||| | |||||||||| | ||| | || |||||||||| |||||||||||| Sbjct 1286511 GCGCATTACAACAAGCGCTCTGCCATCACATCTCG-GAGATCCAGATGGCCGTGCGCCTG 1286569 Query 725097 ATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 | ||| ||||| ||||||| || ||| || || ||||| || Sbjct 1286570 CTGCTGCCTGGCGAGCTGGCCAAGCGCGCTGTATCTGAGGGTAC 1286613 >seq1570 Length=782280 Score = 91.5 bits (100), Expect = 2e-12 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 1818122 GGGCACGCCCACCTCGTCAATGTCAATCTCGGGGTCGGGGCTGATGACGGCGCGCGCGGT 1818181 ||||||||| |||| ||||||| | | |||||||||| ||||||| | ||| || | Sbjct 58419 GGGCACGCCAACCTGGTCAATGGAGAGGTTGGGGTCGGGGGTGATGACTGTGCGGGCTGA 58478 Query 1818182 AAAGTTGACGCGCTTGCCCATGCAATTGCCGCGGATCCTGCCCTCCTTGCCCTTGAACCG 1818241 |||| ||| ||||||||||| || || || | || ||| ||||||||||| ||||| Sbjct 58479 GAAGTCGACACGCTTGCCCATCAGGTTCCCTCGTACCCGGCCTTCCTTGCCCTTTAACCG 58538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7171474892954428