Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202
012-01-23] 6,323 sequences; 3,103,808,406 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq102 563 1e-155
seq87 313 3e-80
seq88 125 8e-24
seq23 120 4e-22
seq9 84.2 3e-11
>seq102
Length=10627846
Score = 563 bits (624), Expect = 1e-155
Identities = 1416/2139 (66%), Gaps = 36/2139 (2%)
Strand=Plus/Minus
Query 52832 GGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGC 52891
||| | || | || ||| ||||| || || || | ||| | |||| || || || | |
Sbjct 1347420 GGTCTTGTCCTTAAATAATACATCCCAGTCTTCAAACCCTGCTTCCAGCCATAGAACTAC 1347361
Query 52892 ATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGA 52951
||||| || ||||| ||| | || || || |||||||| |||| | | || ||||||
Sbjct 1347360 ATACTAGTGAGTTTCCCATAGTTAGGCTCAGCGATATGGATGTTCAGACACTGGCTTTGA 1347301
Query 52952 TCGATGAAGGCTCCCCTGTCT--GCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCC 53009
|| ||||| || || || ||| || |||| || | || || || || | |||||||
Sbjct 1347300 TCAATGAAAGCCCCTCTCTCTCAGCTTCCATCTTGAATATGGTTTTCTGAGAGATTTCCC 1347241
Query 53010 AAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTT-TGTAT--TCTGAATAGATC 53066
| | || ||||||| | |||| | || || |||| | ||||| |||| ||||| |
Sbjct 1347240 ACACCGTCTTATAAAGTTGCTTCAGGTCATCAGGAATTTCATGTATGCTCTGGATAGAGC 1347181
Query 53067 CAC--CATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 53124
|| ||| | |||||| || || | ||| |||||||| || | ||||| || |
Sbjct 1347180 CATTGCATGAA--ATAATCTGTTTTTTCACCTCTTCATTCCACAAGTCCCTCTCAGTAAG 1347123
Query 53125 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 53184
| || | || | || ||||| || | ||||||||||| ||||| ||||| | ||||||
Sbjct 1347122 ATCTTTCAGTAAGTGGGGATTCACAATCTGAAATTCTCCTGACAAGACTCTGCAAGTGTA 1347063
Query 53185 AATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 53244
|| || ||||||||||||| ||||||||||| |||| || ||||||||||| ||
Sbjct 1347062 GATGTTGGTGGTATACGGTTCAGTGGACTCATTATTCCCCAGTATCTGAGCAGTTGAAGC 1347003
Query 53245 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 53304
||| ||||| | || | | |||||| ||||| | ||| || || || || | |||
Sbjct 1347002 AGTAGGCATCAGAGCAATAAGTAAACTGTTTCTTACACCATACTTTGCAATCTTCTGTTT 1346943
Query 53305 TAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAAT 53364
| | ||| | | | ||| || || | || | ||| || ||
Sbjct 1346942 GACAAGTTTCTAGTCCCATAGGTCTGTAGG-ATAACATTCCACGTACACCAG---AGGAT 1346887
Query 53365 ACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTC 53424
| || ||| | || | |||| || || |||| || | | || ||||||||
Sbjct 1346886 TCTTTTGCTGACTGGAGAGCACTCATAGGTTTCATATGAGCCATGTTCCTTGGCTAGTTC 1346827
Query 53425 ACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTG 53484
|||||| || || | || || ||||||||| |||| || || | |||||| | ||
Sbjct 1346826 ACAACTGGCTTCCAGGGCTCCATAATAAATGATTTCAAAAATATGCTTATTCAATAACTG 1346767
Query 53485 TGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAAC 53544
|| || | || ||| | ||||| || | || ||||| || ||||| | ||||| ||
Sbjct 1346766 GGCATCTGGACTCTCAGAAGGATACTTCATCAGGATAAAAGCATCTGCCAGACCTTGTAC 1346707
Query 53545 ACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATA 53604
||| | || || || ||| || ||| | || | | |||||||||||| | ||
Sbjct 1346706 CCCAGTTCCAATGGGGTGATGGCTTTTACTTGATAACAATG-TTCTGGAATAGGGTGGTA 1346648
Query 53605 ATTAATATCTATAATTTTATTGAGGTTTCTGACAATTACTTTGACCACATCCTTCAGTTT 53664
||||||||| |||||||||| | ||| ||||| |||||| || || | ||
Sbjct 1346647 ATTAATATCAGTAATTTTATTCAAGTTATGGACAACAACTTTGGTGACTTCAGCTAACTT 1346588
Query 53665 GAGAAAATCAAAT---TGTCCATCTATTACAAACATGTTCAATGCAATAGATGCCAGATT 53721
||| ||| || ||| | | | ||| |||| |||| || | || |||| ||
Sbjct 1346587 CTTAAAGTCATATGTGTGTTCTGATGTGACATACATATTCAGGGCCAGGGAAGCCAAGTT 1346528
Query 53722 ACAAACGGCTACCTCAT--TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTA 53779
|||||| || ||||||| | || | ||| | || ||| || ||||| || || ||
Sbjct 1346527 ACAAACTGCAACCTCATCTTTGCTA--GTATACTCTACTATTTCTGTGCACAGGTTGCTG 1346470
Query 53780 CACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGA 53839
|| ||||| ||||| | || || | || ||||| ||| | | |||||| || ||
Sbjct 1346469 CATTTGATCGTTCCCAGGTTCTGCCGGTTGCTCTTCCAATTATAGGAATCCTTGTAGAGC 1346410
Query 53840 ATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCC 53899
||| | | ||||| || || ||| || || | || || | ||| | | ||
Sbjct 1346409 ATGTACAGAGTACCTGTCTCTGCCTGAGACTCAGTGATGGCATACCAAAGCTGCTGTGCT 1346350
Query 53900 TTTATTATAGATTTGTAT-CTCTTTTCTCTTTCGTATAG----TGTATACAATCGTTCAA 53954
|||| | |||| | | || |||| ||| |||||| || ||||
Sbjct 1346349 TTTACAAC---TTTGCGGACACGACCCTGTTTCTCATAACTTTTGTATAGCTTC--TCAA 1346295
Query 53955 ACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACT 54014
| || |||||||||| | |||| ||| || | |||| |||||| || | ||||| |
Sbjct 1346294 ATTCCTCTCCCCAAATCTCATCCAGGCCAAGAAACTCATTTGGACACCTCGAAGACCAGT 1346235
Query 54015 CTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGAT 54074
| | | || |||| |||||||||||||||| |||||||||| || | ||||| |
Sbjct 1346234 CCTGATTAGTCTCCACTAGTTTCATAAAGAGATCCAGAATCCAAAGGGCAAGGAATAGGT 1346175
Query 54075 CTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATAT 54134
| |||| ||||| || || ||||| ||||| || | ||| |||||| | | || |
Sbjct 1346174 CCCTGGCATGCTGTTCTTCCTTCCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGT 1346115
Query 54135 CAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGAT 54194
|| ||||||| || |||| ||| || | | || || || | ||||| || ||| |
Sbjct 1346114 CA-AATGCCAAGGCTCCAGGTAAATAGCAAATACACCGGGTCACTTGTTCCCACCCCAGT 1346056
Query 54195 CTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCAC 54254
| | || || | ||||| ||||| ||||||| ||| || | || | |||||| |
Sbjct 1346055 CCACATACCTTACTGTGTTGTTATACACTCTCAGCATAGGTACAAGGCTATTGGAATTGC 1345996
Query 54255 CATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCC 54314
|||| |||| | |||||||| ||| | || | ||| ||| | | | ||| || |
Sbjct 1345995 CATTAATCCCAGCAATATAGCTGCCAGTAGCTCAGATACAACTCACAGCAACACCAATTC 1345936
Query 54315 CCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATAC 54374
|||| || || || |||| ||| || | |||| |||||||| ||||| || ||||
Sbjct 1345935 CCCCAGCAGACTTGGAAATTAGTGCACACTGCTTTAGAGTATCATAAATGCCTTCAATAC 1345876
Query 54375 TATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCAT 54434
| ||||| |||| | || || |||||||||| ||| | | | || || ||||
Sbjct 1345875 TGTCATCTTTCATACTCAGAAGGGAACAGCTAGAACGTTGAGGGTGGTTGGTACCAGCAT 1345816
Query 54435 TAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGA 54494
| | | || || || || |||||||| || ||||| || || ||||| || || |
Sbjct 1345815 TGGAGGGCATGGGGGAGGCATGAGTAAACCAATTCTCAGAGAGAAGGTTGTATGTTTCAA 1345756
Query 54495 TAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAG 54554
|||| | || || || || ||||| || || | || | ||| ||||| || || |
Sbjct 1345755 TAGCAGCATCAATGTCTTCTTTGTGAATCCCAACAGATACCCTCATCAACATATGTTGTG 1345696
Query 54555 GTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAAC 54614
|||||||| | || || || |||| ||| ||||| |||| || || ||||
Sbjct 1345695 GTCTTTCAGCCCCTTTTCCATTGATCTTCAACAAATAGGACCACTCCAGTGTCTTGAAAC 1345636
Query 54615 CAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTAT 54674
|||| || || || || || |||| || || ||||| |||| || || | ||| ||||
Sbjct 1345635 CAAAGTAATTATAAGAGAATTCTCAGTCATAGATAATGGCTGAATTCAGGTGATCTTTAT 1345576
Query 54675 ATTTGTTAACTACATCCATGGTAAT--ACTTGAAATAATCGGAGAATGTTTCCCATTTTT 54732
|| | ||||| ||| | || | | || | || |||| ||||| |
Sbjct 1345575 TGGCCAAAATAATATCCA--GTATTGACCTGGCCACCATAAGGGAGCGTTTGCCATTATG 1345518
Query 54733 AGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTT 54792
|||||| | ||||| | | || | |||||| ||||| || | ||| || ||||||||
Sbjct 1345517 AGGATTTATGTAGTTGTACAGGTCTTCCATCACGTCACTGAACACTTTCTTCGTTTCTTT 1345458
Query 54793 GTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGT 54852
||| | || || || || | || || || | |||||||| || || || | |||||
Sbjct 1345457 GTGCAAGTTAGAGACAGCAGTCCTTGCTGCCGGGATGGCATAGTCAGGGTGCTTGGTAGT 1345398
Query 54853 ACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 54912
| || || |||||||| || | || |||||| ||| || || || || ||| | ||
Sbjct 1345397 CAAGGTCGCAGCTATTTCAGCAGCCAAAGTGTCTGGTTCCACAGTGGTGACCCCACTGTA 1345338
Query 54913 TATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATC 54951
|| || ||||| || | ||| | || | | ||||||
Sbjct 1345337 TAAGCCCTGGATTACTTCCATGGTGATCTAAGCAGGATC 1345299
>seq87
Length=11743621
Score = 313 bits (346), Expect = 3e-80
Identities = 620/912 (68%), Gaps = 18/912 (2%)
Strand=Plus/Plus
Query 23788 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 23844
|||| |||||| |||| || | |||| ||| ||| | | ||||| ||||| ||
Sbjct 8842104 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGGCTCGACATCACTCCTATCC 8842163
Query 23845 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 23904
| ||||| || | || ||||| || |||||| | ||||| ||| ||||| |
Sbjct 8842164 TCTGGTACTCTC--------TTCTCGAAGAAGTTAGTTCTCCCTTCCTGTGAAATATTCT 8842215
Query 23905 CCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATCA 23964
|||| || || ||||||| || | | | | ||||| |||| ||| || |
Sbjct 8842216 CCATAAAGTCAAATGGATTTTCTACTCTGAATACCTTGTTAAAACCCAGTTCCAGCATTA 8842275
Query 23965 ATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 24024
||| ||||| |||| | | || || ||||| | |||||||||| ||||| |
Sbjct 8842276 GTCTCTCTGCTACAA-CGCAATGTACTGCTTCATTAAAGTGCAATTCATTCTGATAAGCT 8842334
Query 24025 TAAC-TGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 24083
| || || ||| ||| ||||||| | || | ||| || || || | | || ||
Sbjct 8842335 TCACATGCAAG-GCCTCAGTAAGGAGCTCCTATTCTATCCTAACAGCATTAATAATTATT 8842393
Query 24084 GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 24143
| ||||| | | || ||| | | || ||||| ||| | || | ||
Sbjct 8842394 TCTTTTACTCTCTGCTCCAAAGGTTTGTGTAGCAAGTGTTTGAACGCTATGCAGGTAAAG 8842453
Query 24144 TCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 24203
|| ||||||| || ||| ||||| ||||| ||||| |||||| | ||||| || ||||||
Sbjct 8842454 TCACAGTGTAAACTCTCATCTCTGCTAATGAATTCATTGGAACATGTGAGGCCAGGCATT 8842513
Query 24204 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCT 24263
| || || || || || || |||||||| ||||| || ||||||||||| |||||||||
Sbjct 8842514 AATCCTCGTTTCTTGAGTCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCT 8842573
Query 24264 ACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCGCTGTCATGTATCCACTTT 24320
| || |||||||| | | | | ||||| | | | | || ||||| |
Sbjct 8842574 ATTGGGGCAAAGGCTACATCACACTTACCATAGGTAGCTTCTTTTTCCCCGATCCAATGC 8842633
Query 24321 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAG 24380
|||||||| |||||||| ||||||||||||||||| || || ||||| |||||| |
Sbjct 8842634 AAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGT-TCAATGGCATTGAAGAGAAAC 8842692
Query 24381 tttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGA 24440
| |||| || |||||||| || || ||| | | ||| | |||||||| |||||
Sbjct 8842693 TCCCTTTCCTTGGAATCTTTAATGTAAGTGTCAGTAAGGAGATTGTACATTTCAGAATGT 8842752
Query 24441 ATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCT 24500
|||||||| || || ||||| || || |||| ||| | || || |||||||| |||| |
Sbjct 8842753 ATGTTTTCCATTGCAATTTGGAAGCCATAGAGACAGCAGGCTTCTGTAATCTGAACTTGT 8842812
Query 24501 ATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCC 24560
| |||||| | || |||||||||| ||| || || || |||||||| || |||
Sbjct 8842813 TGGCTAAATCGCACCAGCAAGTTTTCATTCATTATGCCATCGCTTGCTGCAAAGAAAGCC 8842872
Query 24561 AATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCT 24620
| |||||| | |||||||| |||| | || | || | ||| | | || ||
Sbjct 8842873 AGAACATGTGATGTAAAATATCTTTCTTTAGGCTTCAGGGCTTCCCAGTGCTGAATGTCC 8842932
Query 24621 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 24680
|| || | ||||| || || | |||||||| || | ||| || || |||||||| | |
Sbjct 8842933 TTGGAAAGATCCAGCTCCTCAGCAGTCCAAAAGGAAGGCTCAGCTTTCTTATACATCTGC 8842992
Query 24681 CAGATGTCATGA 24692
|| || ||||||
Sbjct 8842993 CAAATATCATGA 8843004
>seq88
Length=11737398
Score = 125 bits (138), Expect = 8e-24
Identities = 110/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 53150 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 53209
|| ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| |
Sbjct 362825 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATAAGGTTCAATG 362884
Query 53210 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 53269
||||||||||| |||| || ||||||||||| ||||| ||||| || || | | ||||
Sbjct 362885 GACTCATTATTCCCCAGTATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 362944
Query 53270 CTATTTCTAAGACCGTA 53286
|| ||||| | ||| ||
Sbjct 362945 CTGTTTCTTACACCATA 362961
Score = 120 bits (132), Expect = 4e-22
Identities = 129/171 (75%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 52875 TCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 52934
|||| ||||| || |||||||| || |||||| ||| | || || || |||||||| |
Sbjct 360231 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCGATATGGATGT 360290
Query 52935 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 52994
||| ||| ||||||||||||||||| || || || || || ||||| || | || || |
Sbjct 360291 TCAGAGACTGACTTTGATCGATGAAAGCCCCTCTCTCAGCTGCCATCTTGAGTATGGTTT 360350
Query 52995 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 53045
|||| | |||||||| | || ||||||| | |||| | || || ||||
Sbjct 360351 TTTGAGAGATTTCCCACACTGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 360401
Score = 109 bits (120), Expect = 7e-19
Identities = 105/135 (78%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 54025 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 54084
|| ||||||||||||||||||||| ||||||||||| || | ||||| || |||| |
Sbjct 371360 CTCCACTCGTTTCATAAAGAGATCCGGAATCCAAAGGGCAAAGAATAGGTCCCTGGCACG 371419
Query 54085 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 54144
||||| || |||||||| ||||| || | ||| |||||| | | || || |||||||
Sbjct 371420 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCA 371479
Query 54145 CGGTTCCAAGTATAT 54159
|| |||| ||| ||
Sbjct 371480 AGGCTCCAGGTAAAT 371494
Score = 91.5 bits (100), Expect = 2e-13
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 53388 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 53447
|||| || || ||||| || | || || || ||||||||||| || || | || || |
Sbjct 366487 CATAGGTTTCATATGGGCCATGCTCCTTGGCCAGTTCACAACTGGCTTCCAGGGCTCCAT 366546
Query 53448 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 53507
||||||||||||| || || | |||||| | || || || | || ||||| ||||
Sbjct 366547 AATAAATGGTTTCAAAAATTTGCTTATTCAATAACTGGGCGTCTGGACTCTCAAAAGGAT 366606
Query 53508 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 53567
| | | || ||||| || ||||| | ||||| || ||||| || || || | ||| |
Sbjct 366607 ACCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGGC 366666
Query 53568 TCTTATTAGA 53577
||||| ||
Sbjct 366667 ATTTATTTGA 366676
Score = 87.8 bits (96), Expect = 2e-12
Identities = 119/166 (72%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 54768 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 54827
|||| || | ||| || ||||||||||| | || || || || || || || || || |
Sbjct 385273 CACTGAACACTTTCTTCGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCAGGA 385332
Query 54828 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCA 54887
||||||| || || || | ||||| | || || ||| |||| || | || |||||| |
Sbjct 385333 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTGTCTA 385392
Query 54888 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 54933
||| || || || || ||| | |||| || ||||| || |||||
Sbjct 385393 GTTCCACAGTGGTGACCCCACTGTATAAGCCCTGGATTACTTTCAT 385438
>seq23
Length=24341844
Score = 120 bits (132), Expect = 4e-22
Identities = 99/121 (82%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 24157 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 24216
|||| ||||| ||||| | ||| |||||||| ||||| || ||||||| || || || |
Sbjct 8996043 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGCCCAGGCATTAATCCTCGTTTCT 8996102
Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276
| ||||| ||||| || ||||| || ||||||||||| ||||||||||| || |||||||
Sbjct 8996103 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCTACGGCTGCAAAGG 8996162
Query 24277 C 24277
|
Sbjct 8996163 C 8996163
Score = 104 bits (114), Expect = 3e-17
Identities = 95/120 (79%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 24395 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 24454
|||||||| || || ||||| | |||||||||||||| ||||| |||||||| |||||
Sbjct 8998515 ATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 8998574
Query 24455 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTC 24514
||||| || || |||||||| | || || |||||||| |||||| | |||||| ||
Sbjct 8998575 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 8998634
>seq9
Length=34412642
Score = 84.2 bits (92), Expect = 3e-11
Identities = 84/109 (77%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 24519 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 24578
|| |||||||| || ||||| ||||||||||||||||| || || || || ||||||
Sbjct 15797776 AAGTTTTCATTTACAATTCCATCACTGGCTGCAAAAAAGGCTAAGACGTGGGAGATAAAA 15797717
Query 24579 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATA 24627
|| || || |||| ||| || || ||||||| | || ||| || ||||
Sbjct 15797716 TACTTCTCATCTGATGTAAGCTTGTTCCAATGAGGGAGATCCTTTGATA 15797668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593674673729040
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