Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202 012-01-23] 6,323 sequences; 3,103,808,406 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq102 563 1e-155 seq87 313 3e-80 seq88 125 8e-24 seq23 120 4e-22 seq9 84.2 3e-11 >seq102 Length=10627846 Score = 563 bits (624), Expect = 1e-155 Identities = 1416/2139 (66%), Gaps = 36/2139 (2%) Strand=Plus/Minus Query 52832 GGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGC 52891 ||| | || | || ||| ||||| || || || | ||| | |||| || || || | | Sbjct 1347420 GGTCTTGTCCTTAAATAATACATCCCAGTCTTCAAACCCTGCTTCCAGCCATAGAACTAC 1347361 Query 52892 ATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGA 52951 ||||| || ||||| ||| | || || || |||||||| |||| | | || |||||| Sbjct 1347360 ATACTAGTGAGTTTCCCATAGTTAGGCTCAGCGATATGGATGTTCAGACACTGGCTTTGA 1347301 Query 52952 TCGATGAAGGCTCCCCTGTCT--GCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCC 53009 || ||||| || || || ||| || |||| || | || || || || | ||||||| Sbjct 1347300 TCAATGAAAGCCCCTCTCTCTCAGCTTCCATCTTGAATATGGTTTTCTGAGAGATTTCCC 1347241 Query 53010 AAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTT-TGTAT--TCTGAATAGATC 53066 | | || ||||||| | |||| | || || |||| | ||||| |||| ||||| | Sbjct 1347240 ACACCGTCTTATAAAGTTGCTTCAGGTCATCAGGAATTTCATGTATGCTCTGGATAGAGC 1347181 Query 53067 CAC--CATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 53124 || ||| | |||||| || || | ||| |||||||| || | ||||| || | Sbjct 1347180 CATTGCATGAA--ATAATCTGTTTTTTCACCTCTTCATTCCACAAGTCCCTCTCAGTAAG 1347123 Query 53125 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 53184 | || | || | || ||||| || | ||||||||||| ||||| ||||| | |||||| Sbjct 1347122 ATCTTTCAGTAAGTGGGGATTCACAATCTGAAATTCTCCTGACAAGACTCTGCAAGTGTA 1347063 Query 53185 AATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 53244 || || ||||||||||||| ||||||||||| |||| || ||||||||||| || Sbjct 1347062 GATGTTGGTGGTATACGGTTCAGTGGACTCATTATTCCCCAGTATCTGAGCAGTTGAAGC 1347003 Query 53245 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 53304 ||| ||||| | || | | |||||| ||||| | ||| || || || || | ||| Sbjct 1347002 AGTAGGCATCAGAGCAATAAGTAAACTGTTTCTTACACCATACTTTGCAATCTTCTGTTT 1346943 Query 53305 TAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAAT 53364 | | ||| | | | ||| || || | || | ||| || || Sbjct 1346942 GACAAGTTTCTAGTCCCATAGGTCTGTAGG-ATAACATTCCACGTACACCAG---AGGAT 1346887 Query 53365 ACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTC 53424 | || ||| | || | |||| || || |||| || | | || |||||||| Sbjct 1346886 TCTTTTGCTGACTGGAGAGCACTCATAGGTTTCATATGAGCCATGTTCCTTGGCTAGTTC 1346827 Query 53425 ACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTG 53484 |||||| || || | || || ||||||||| |||| || || | |||||| | || Sbjct 1346826 ACAACTGGCTTCCAGGGCTCCATAATAAATGATTTCAAAAATATGCTTATTCAATAACTG 1346767 Query 53485 TGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAAC 53544 || || | || ||| | ||||| || | || ||||| || ||||| | ||||| || Sbjct 1346766 GGCATCTGGACTCTCAGAAGGATACTTCATCAGGATAAAAGCATCTGCCAGACCTTGTAC 1346707 Query 53545 ACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATA 53604 ||| | || || || ||| || ||| | || | | |||||||||||| | || Sbjct 1346706 CCCAGTTCCAATGGGGTGATGGCTTTTACTTGATAACAATG-TTCTGGAATAGGGTGGTA 1346648 Query 53605 ATTAATATCTATAATTTTATTGAGGTTTCTGACAATTACTTTGACCACATCCTTCAGTTT 53664 ||||||||| |||||||||| | ||| ||||| |||||| || || | || Sbjct 1346647 ATTAATATCAGTAATTTTATTCAAGTTATGGACAACAACTTTGGTGACTTCAGCTAACTT 1346588 Query 53665 GAGAAAATCAAAT---TGTCCATCTATTACAAACATGTTCAATGCAATAGATGCCAGATT 53721 ||| ||| || ||| | | | ||| |||| |||| || | || |||| || Sbjct 1346587 CTTAAAGTCATATGTGTGTTCTGATGTGACATACATATTCAGGGCCAGGGAAGCCAAGTT 1346528 Query 53722 ACAAACGGCTACCTCAT--TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTA 53779 |||||| || ||||||| | || | ||| | || ||| || ||||| || || || Sbjct 1346527 ACAAACTGCAACCTCATCTTTGCTA--GTATACTCTACTATTTCTGTGCACAGGTTGCTG 1346470 Query 53780 CACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGA 53839 || ||||| ||||| | || || | || ||||| ||| | | |||||| || || Sbjct 1346469 CATTTGATCGTTCCCAGGTTCTGCCGGTTGCTCTTCCAATTATAGGAATCCTTGTAGAGC 1346410 Query 53840 ATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCC 53899 ||| | | ||||| || || ||| || || | || || | ||| | | || Sbjct 1346409 ATGTACAGAGTACCTGTCTCTGCCTGAGACTCAGTGATGGCATACCAAAGCTGCTGTGCT 1346350 Query 53900 TTTATTATAGATTTGTAT-CTCTTTTCTCTTTCGTATAG----TGTATACAATCGTTCAA 53954 |||| | |||| | | || |||| ||| |||||| || |||| Sbjct 1346349 TTTACAAC---TTTGCGGACACGACCCTGTTTCTCATAACTTTTGTATAGCTTC--TCAA 1346295 Query 53955 ACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACT 54014 | || |||||||||| | |||| ||| || | |||| |||||| || | ||||| | Sbjct 1346294 ATTCCTCTCCCCAAATCTCATCCAGGCCAAGAAACTCATTTGGACACCTCGAAGACCAGT 1346235 Query 54015 CTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGAT 54074 | | | || |||| |||||||||||||||| |||||||||| || | ||||| | Sbjct 1346234 CCTGATTAGTCTCCACTAGTTTCATAAAGAGATCCAGAATCCAAAGGGCAAGGAATAGGT 1346175 Query 54075 CTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATAT 54134 | |||| ||||| || || ||||| ||||| || | ||| |||||| | | || | Sbjct 1346174 CCCTGGCATGCTGTTCTTCCTTCCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGT 1346115 Query 54135 CAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGAT 54194 || ||||||| || |||| ||| || | | || || || | ||||| || ||| | Sbjct 1346114 CA-AATGCCAAGGCTCCAGGTAAATAGCAAATACACCGGGTCACTTGTTCCCACCCCAGT 1346056 Query 54195 CTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCAC 54254 | | || || | ||||| ||||| ||||||| ||| || | || | |||||| | Sbjct 1346055 CCACATACCTTACTGTGTTGTTATACACTCTCAGCATAGGTACAAGGCTATTGGAATTGC 1345996 Query 54255 CATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCC 54314 |||| |||| | |||||||| ||| | || | ||| ||| | | | ||| || | Sbjct 1345995 CATTAATCCCAGCAATATAGCTGCCAGTAGCTCAGATACAACTCACAGCAACACCAATTC 1345936 Query 54315 CCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATAC 54374 |||| || || || |||| ||| || | |||| |||||||| ||||| || |||| Sbjct 1345935 CCCCAGCAGACTTGGAAATTAGTGCACACTGCTTTAGAGTATCATAAATGCCTTCAATAC 1345876 Query 54375 TATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCAT 54434 | ||||| |||| | || || |||||||||| ||| | | | || || |||| Sbjct 1345875 TGTCATCTTTCATACTCAGAAGGGAACAGCTAGAACGTTGAGGGTGGTTGGTACCAGCAT 1345816 Query 54435 TAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGA 54494 | | | || || || || |||||||| || ||||| || || ||||| || || | Sbjct 1345815 TGGAGGGCATGGGGGAGGCATGAGTAAACCAATTCTCAGAGAGAAGGTTGTATGTTTCAA 1345756 Query 54495 TAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAG 54554 |||| | || || || || ||||| || || | || | ||| ||||| || || | Sbjct 1345755 TAGCAGCATCAATGTCTTCTTTGTGAATCCCAACAGATACCCTCATCAACATATGTTGTG 1345696 Query 54555 GTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAAC 54614 |||||||| | || || || |||| ||| ||||| |||| || || |||| Sbjct 1345695 GTCTTTCAGCCCCTTTTCCATTGATCTTCAACAAATAGGACCACTCCAGTGTCTTGAAAC 1345636 Query 54615 CAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTAT 54674 |||| || || || || || |||| || || ||||| |||| || || | ||| |||| Sbjct 1345635 CAAAGTAATTATAAGAGAATTCTCAGTCATAGATAATGGCTGAATTCAGGTGATCTTTAT 1345576 Query 54675 ATTTGTTAACTACATCCATGGTAAT--ACTTGAAATAATCGGAGAATGTTTCCCATTTTT 54732 || | ||||| ||| | || | | || | || |||| ||||| | Sbjct 1345575 TGGCCAAAATAATATCCA--GTATTGACCTGGCCACCATAAGGGAGCGTTTGCCATTATG 1345518 Query 54733 AGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTT 54792 |||||| | ||||| | | || | |||||| ||||| || | ||| || |||||||| Sbjct 1345517 AGGATTTATGTAGTTGTACAGGTCTTCCATCACGTCACTGAACACTTTCTTCGTTTCTTT 1345458 Query 54793 GTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGT 54852 ||| | || || || || | || || || | |||||||| || || || | ||||| Sbjct 1345457 GTGCAAGTTAGAGACAGCAGTCCTTGCTGCCGGGATGGCATAGTCAGGGTGCTTGGTAGT 1345398 Query 54853 ACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 54912 | || || |||||||| || | || |||||| ||| || || || || ||| | || Sbjct 1345397 CAAGGTCGCAGCTATTTCAGCAGCCAAAGTGTCTGGTTCCACAGTGGTGACCCCACTGTA 1345338 Query 54913 TATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATC 54951 || || ||||| || | ||| | || | | |||||| Sbjct 1345337 TAAGCCCTGGATTACTTCCATGGTGATCTAAGCAGGATC 1345299 >seq87 Length=11743621 Score = 313 bits (346), Expect = 3e-80 Identities = 620/912 (68%), Gaps = 18/912 (2%) Strand=Plus/Plus Query 23788 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 23844 |||| |||||| |||| || | |||| ||| ||| | | ||||| ||||| || Sbjct 8842104 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGGCTCGACATCACTCCTATCC 8842163 Query 23845 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 23904 | ||||| || | || ||||| || |||||| | ||||| ||| ||||| | Sbjct 8842164 TCTGGTACTCTC--------TTCTCGAAGAAGTTAGTTCTCCCTTCCTGTGAAATATTCT 8842215 Query 23905 CCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATCA 23964 |||| || || ||||||| || | | | | ||||| |||| ||| || | Sbjct 8842216 CCATAAAGTCAAATGGATTTTCTACTCTGAATACCTTGTTAAAACCCAGTTCCAGCATTA 8842275 Query 23965 ATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 24024 ||| ||||| |||| | | || || ||||| | |||||||||| ||||| | Sbjct 8842276 GTCTCTCTGCTACAA-CGCAATGTACTGCTTCATTAAAGTGCAATTCATTCTGATAAGCT 8842334 Query 24025 TAAC-TGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 24083 | || || ||| ||| ||||||| | || | ||| || || || | | || || Sbjct 8842335 TCACATGCAAG-GCCTCAGTAAGGAGCTCCTATTCTATCCTAACAGCATTAATAATTATT 8842393 Query 24084 GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 24143 | ||||| | | || ||| | | || ||||| ||| | || | || Sbjct 8842394 TCTTTTACTCTCTGCTCCAAAGGTTTGTGTAGCAAGTGTTTGAACGCTATGCAGGTAAAG 8842453 Query 24144 TCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 24203 || ||||||| || ||| ||||| ||||| ||||| |||||| | ||||| || |||||| Sbjct 8842454 TCACAGTGTAAACTCTCATCTCTGCTAATGAATTCATTGGAACATGTGAGGCCAGGCATT 8842513 Query 24204 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCT 24263 | || || || || || || |||||||| ||||| || ||||||||||| ||||||||| Sbjct 8842514 AATCCTCGTTTCTTGAGTCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCT 8842573 Query 24264 ACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCGCTGTCATGTATCCACTTT 24320 | || |||||||| | | | | ||||| | | | | || ||||| | Sbjct 8842574 ATTGGGGCAAAGGCTACATCACACTTACCATAGGTAGCTTCTTTTTCCCCGATCCAATGC 8842633 Query 24321 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAG 24380 |||||||| |||||||| ||||||||||||||||| || || ||||| |||||| | Sbjct 8842634 AAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGT-TCAATGGCATTGAAGAGAAAC 8842692 Query 24381 tttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGA 24440 | |||| || |||||||| || || ||| | | ||| | |||||||| ||||| Sbjct 8842693 TCCCTTTCCTTGGAATCTTTAATGTAAGTGTCAGTAAGGAGATTGTACATTTCAGAATGT 8842752 Query 24441 ATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCT 24500 |||||||| || || ||||| || || |||| ||| | || || |||||||| |||| | Sbjct 8842753 ATGTTTTCCATTGCAATTTGGAAGCCATAGAGACAGCAGGCTTCTGTAATCTGAACTTGT 8842812 Query 24501 ATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCC 24560 | |||||| | || |||||||||| ||| || || || |||||||| || ||| Sbjct 8842813 TGGCTAAATCGCACCAGCAAGTTTTCATTCATTATGCCATCGCTTGCTGCAAAGAAAGCC 8842872 Query 24561 AATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCT 24620 | |||||| | |||||||| |||| | || | || | ||| | | || || Sbjct 8842873 AGAACATGTGATGTAAAATATCTTTCTTTAGGCTTCAGGGCTTCCCAGTGCTGAATGTCC 8842932 Query 24621 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 24680 || || | ||||| || || | |||||||| || | ||| || || |||||||| | | Sbjct 8842933 TTGGAAAGATCCAGCTCCTCAGCAGTCCAAAAGGAAGGCTCAGCTTTCTTATACATCTGC 8842992 Query 24681 CAGATGTCATGA 24692 || || |||||| Sbjct 8842993 CAAATATCATGA 8843004 >seq88 Length=11737398 Score = 125 bits (138), Expect = 8e-24 Identities = 110/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 53150 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 53209 || ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| | Sbjct 362825 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATAAGGTTCAATG 362884 Query 53210 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 53269 ||||||||||| |||| || ||||||||||| ||||| ||||| || || | | |||| Sbjct 362885 GACTCATTATTCCCCAGTATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 362944 Query 53270 CTATTTCTAAGACCGTA 53286 || ||||| | ||| || Sbjct 362945 CTGTTTCTTACACCATA 362961 Score = 120 bits (132), Expect = 4e-22 Identities = 129/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 52875 TCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 52934 |||| ||||| || |||||||| || |||||| ||| | || || || |||||||| | Sbjct 360231 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCGATATGGATGT 360290 Query 52935 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 52994 ||| ||| ||||||||||||||||| || || || || || ||||| || | || || | Sbjct 360291 TCAGAGACTGACTTTGATCGATGAAAGCCCCTCTCTCAGCTGCCATCTTGAGTATGGTTT 360350 Query 52995 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 53045 |||| | |||||||| | || ||||||| | |||| | || || |||| Sbjct 360351 TTTGAGAGATTTCCCACACTGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 360401 Score = 109 bits (120), Expect = 7e-19 Identities = 105/135 (78%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 54025 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 54084 || ||||||||||||||||||||| ||||||||||| || | ||||| || |||| | Sbjct 371360 CTCCACTCGTTTCATAAAGAGATCCGGAATCCAAAGGGCAAAGAATAGGTCCCTGGCACG 371419 Query 54085 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 54144 ||||| || |||||||| ||||| || | ||| |||||| | | || || ||||||| Sbjct 371420 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCA 371479 Query 54145 CGGTTCCAAGTATAT 54159 || |||| ||| || Sbjct 371480 AGGCTCCAGGTAAAT 371494 Score = 91.5 bits (100), Expect = 2e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 53388 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 53447 |||| || || ||||| || | || || || ||||||||||| || || | || || | Sbjct 366487 CATAGGTTTCATATGGGCCATGCTCCTTGGCCAGTTCACAACTGGCTTCCAGGGCTCCAT 366546 Query 53448 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 53507 ||||||||||||| || || | |||||| | || || || | || ||||| |||| Sbjct 366547 AATAAATGGTTTCAAAAATTTGCTTATTCAATAACTGGGCGTCTGGACTCTCAAAAGGAT 366606 Query 53508 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 53567 | | | || ||||| || ||||| | ||||| || ||||| || || || | ||| | Sbjct 366607 ACCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGGC 366666 Query 53568 TCTTATTAGA 53577 ||||| || Sbjct 366667 ATTTATTTGA 366676 Score = 87.8 bits (96), Expect = 2e-12 Identities = 119/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 54768 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 54827 |||| || | ||| || ||||||||||| | || || || || || || || || || | Sbjct 385273 CACTGAACACTTTCTTCGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCAGGA 385332 Query 54828 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCA 54887 ||||||| || || || | ||||| | || || ||| |||| || | || |||||| | Sbjct 385333 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTGTCTA 385392 Query 54888 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 54933 ||| || || || || ||| | |||| || ||||| || ||||| Sbjct 385393 GTTCCACAGTGGTGACCCCACTGTATAAGCCCTGGATTACTTTCAT 385438 >seq23 Length=24341844 Score = 120 bits (132), Expect = 4e-22 Identities = 99/121 (82%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 24157 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 24216 |||| ||||| ||||| | ||| |||||||| ||||| || ||||||| || || || | Sbjct 8996043 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGCCCAGGCATTAATCCTCGTTTCT 8996102 Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276 | ||||| ||||| || ||||| || ||||||||||| ||||||||||| || ||||||| Sbjct 8996103 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCTACGGCTGCAAAGG 8996162 Query 24277 C 24277 | Sbjct 8996163 C 8996163 Score = 104 bits (114), Expect = 3e-17 Identities = 95/120 (79%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 24395 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 24454 |||||||| || || ||||| | |||||||||||||| ||||| |||||||| ||||| Sbjct 8998515 ATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 8998574 Query 24455 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTC 24514 ||||| || || |||||||| | || || |||||||| |||||| | |||||| || Sbjct 8998575 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 8998634 >seq9 Length=34412642 Score = 84.2 bits (92), Expect = 3e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 24519 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 24578 || |||||||| || ||||| ||||||||||||||||| || || || || |||||| Sbjct 15797776 AAGTTTTCATTTACAATTCCATCACTGGCTGCAAAAAAGGCTAAGACGTGGGAGATAAAA 15797717 Query 24579 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATA 24627 || || || |||| ||| || || ||||||| | || ||| || |||| Sbjct 15797716 TACTTCTCATCTGATGTAAGCTTGTTCCAATGAGGGAGATCCTTTGATA 15797668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593674673729040