Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202 012-01-23] 6,323 sequences; 3,103,808,406 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq175 82.4 7e-11 >seq175 Length=5584636 Score = 82.4 bits (90), Expect = 7e-11 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||||||||| | | |||||||| ||||| |||||||| |||||| |||||||| Sbjct 1836392 GATAAAGAAGGAATTTCTCCTGATCAACAGAGACTGATCTTTGCTGGCAAAAAACTGGAA 1836451 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGT 29172 ||| ||| || || ||||| ||||| ||||| ||||||||||| | |||| Sbjct 1836452 GATGGACCTACTTTGTTTGACTACAACATTCAAAAGGAGTCTACTCTTCATCTTGTGT 1836509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428302991758565