Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202
012-01-23] 6,323 sequences; 3,103,808,406 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq1 379 2e-100
seq256 170 2e-37
seq35 165 1e-35
seq4 138 1e-27
seq16 127 2e-24
>seq1
Length=45942467
Score = 379 bits (420), Expect = 2e-100
Identities = 630/901 (70%), Gaps = 13/901 (1%)
Strand=Plus/Plus
Query 9460 GCTCAGGTGGTACCCGCCCTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATC 9519
|| ||| || | ||| | |||||| || ||||| | |||| ||||||||||| |
Sbjct 25169706 GCCCAGTTGCTGCCCCCGCTGTATTCCCTGGTGTTCATTGTTGGCCTGTTGGGCAATGTG 25169765
Query 9520 TTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTG 9579
| |||||| | || ||| || ||| || | ||| || | || ||||| | |||
Sbjct 25169766 GTGGTGGTGCTGATCCTCACAAAATATGGGAGGCTCAGAATTATGACCAACATCTACCTG 25169825
Query 9580 TTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTAT 9639
| |||||||| || ||||||||||| ||||| | ||| | ||||| ||||| ||||||
Sbjct 25169826 CTCAACTTGGCGATTTCTGACTTGCTCTTTCTAGTCACTCTTCCATTCTGGATTCACTAT 25169885
Query 9640 ATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTG 9699
||||| || | || | ||| |||||| || | ||||||| | ||| || |
Sbjct 25169886 GTTGGA-TGGAACAAG--TGGGTTTTTGGCCATTACATGTGTAAGTTCCTCTCAGGATTT 25169942
Query 9700 TGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTAT 9759
| | |||| ||||||| || |||||| |||| ||||||| || | ||||||||
Sbjct 25169943 TATCACATAGGCTTGTACAGTGAGATCTTTTTCATCGTCCTGCTGACGATCGACAGGTAC 25170002
Query 9760 CTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCATAGTT 9819
|| || ||||| ||||||| | | || || | | || || |||| ||| || |
Sbjct 25170003 CTGGCCATTGTCCATGCTGTGTTTTCCCTGCGGGTCCGGACTGTCACCTTTGGTATCATA 25170062
Query 9820 ACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCAT 9879
||| || | | |||||| | ||||||||| | | |||||||||||||| |||| | |
Sbjct 25170063 ACCAGTATCTTCACCTGGGTCCTGGCAGGGCTAGCGGCCCTCCCTGAATTTATCTTCCGT 25170122
Query 9880 GGACACCAAGATGACAATGGTAGGGTTCAGTGTGA--TCCTTACTACCCAGAG-ATGTCT 9936
| |||||| || ||| | || || || |||||| ||||||||| |||
Sbjct 25170123 GAGTTCCAAGAGGAGGATG--AACACTCTGTCTGCAGTCCTTATTACCCAGAGGATGAAG 25170180
Query 9937 ACAAATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCT 9996
| | || |||| ||| ||| | | | ||| ||| || |||| | | |||
Sbjct 25170181 A-AGATACCTGGAAGCGTTTCCATGCTCTGAGAATGAGTATCTTGGGTCTTGCTGTCCCT 25170239
Query 9997 CTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGC 10056
|| |||||||||||| ||||||||| | ||| || | || ||| |||| |||| ||
Sbjct 25170240 CTACTCATTATGGCTATCTGCTACTCAGGAATCATTAAAACGCTGCTGAGATGCCCTAGT 25170299
Query 10057 AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTT 10116
| || ||||||||||||||| ||||||| |||||||||||||||| || ||| ||||
Sbjct 25170300 AGAAAAAAGTACAAGGCCATCCGGCTCATTTTTGTCATCATGGTGGTCTTTTTCATTTTC 25170359
Query 10117 TGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTT--AACC 10174
||||||||||||||| | |||||||| || ||||| ||||| | ||||| | | | |
Sbjct 25170360 TGGACACCCTACAACCTGGTTCTCCTTCTTTCTACTTTTCAAGTGACCCTCCCTGAGAAC 25170419
Query 10175 TGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTAGCCT 10234
| ||| ||| ||||| | ||||| |||| || | ||| || | | ||||
Sbjct 25170420 AACTGTGAGCA--GAGCAAACATCTGGACCTGGCCATGGCAGTGACAGAAGTAATCGCCT 25170477
Query 10235 ACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAGAAGAC 10294
|||||||||| ||||||||||| | |||||||| || || || |||| || | | ||
Sbjct 25170478 ACACACACTGCTGCATCAACCCCATCATCTACGCCTTTGTTGGTGAGAGATTCCGGAAAC 25170537
Query 10295 ACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAAGTACATCCCCTTCC 10354
|||| | ||| | ||||||| | |||| ||||||||| |||| ||| | || ||||
Sbjct 25170538 ACCTACATCACCTTTTCCACAGGCATGTGGGCATCTACCTGAGCAAATACCTTCCATTCC 25170597
Query 10355 T 10355
|
Sbjct 25170598 T 25170598
Score = 379 bits (420), Expect = 2e-100
Identities = 630/901 (70%), Gaps = 13/901 (1%)
Strand=Plus/Plus
Query 176346 GCTCAGGTGGTACCCGCCCTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATC 176405
|| ||| || | ||| | |||||| || ||||| | |||| ||||||||||| |
Sbjct 25169706 GCCCAGTTGCTGCCCCCGCTGTATTCCCTGGTGTTCATTGTTGGCCTGTTGGGCAATGTG 25169765
Query 176406 TTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTG 176465
| |||||| | || ||| || ||| || | ||| || | || ||||| | |||
Sbjct 25169766 GTGGTGGTGCTGATCCTCACAAAATATGGGAGGCTCAGAATTATGACCAACATCTACCTG 25169825
Query 176466 TTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTAT 176525
| |||||||| || ||||||||||| ||||| | ||| | ||||| ||||| ||||||
Sbjct 25169826 CTCAACTTGGCGATTTCTGACTTGCTCTTTCTAGTCACTCTTCCATTCTGGATTCACTAT 25169885
Query 176526 ATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTG 176585
||||| || | || | ||| |||||| || | ||||||| | ||| || |
Sbjct 25169886 GTTGGA-TGGAACAAG--TGGGTTTTTGGCCATTACATGTGTAAGTTCCTCTCAGGATTT 25169942
Query 176586 TGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTAT 176645
| | |||| ||||||| || |||||| |||| ||||||| || | ||||||||
Sbjct 25169943 TATCACATAGGCTTGTACAGTGAGATCTTTTTCATCGTCCTGCTGACGATCGACAGGTAC 25170002
Query 176646 CTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCATAGTT 176705
|| || ||||| ||||||| | | || || | | || || |||| ||| || |
Sbjct 25170003 CTGGCCATTGTCCATGCTGTGTTTTCCCTGCGGGTCCGGACTGTCACCTTTGGTATCATA 25170062
Query 176706 ACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCAT 176765
||| || | | |||||| | ||||||||| | | |||||||||||||| |||| | |
Sbjct 25170063 ACCAGTATCTTCACCTGGGTCCTGGCAGGGCTAGCGGCCCTCCCTGAATTTATCTTCCGT 25170122
Query 176766 GGACACCAAGATGACAATGGTAGGGTTCAGTGTGA--TCCTTACTACCCAGAG-ATGTCT 176822
| |||||| || ||| | || || || |||||| ||||||||| |||
Sbjct 25170123 GAGTTCCAAGAGGAGGATG--AACACTCTGTCTGCAGTCCTTATTACCCAGAGGATGAAG 25170180
Query 176823 ACAAATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCT 176882
| | || |||| ||| ||| | | | ||| ||| || |||| | | |||
Sbjct 25170181 A-AGATACCTGGAAGCGTTTCCATGCTCTGAGAATGAGTATCTTGGGTCTTGCTGTCCCT 25170239
Query 176883 CTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGC 176942
|| |||||||||||| ||||||||| | ||| || | || ||| |||| |||| ||
Sbjct 25170240 CTACTCATTATGGCTATCTGCTACTCAGGAATCATTAAAACGCTGCTGAGATGCCCTAGT 25170299
Query 176943 AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTT 177002
| || ||||||||||||||| ||||||| |||||||||||||||| || ||| ||||
Sbjct 25170300 AGAAAAAAGTACAAGGCCATCCGGCTCATTTTTGTCATCATGGTGGTCTTTTTCATTTTC 25170359
Query 177003 TGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTT--AACC 177060
||||||||||||||| | |||||||| || ||||| ||||| | ||||| | | | |
Sbjct 25170360 TGGACACCCTACAACCTGGTTCTCCTTCTTTCTACTTTTCAAGTGACCCTCCCTGAGAAC 25170419
Query 177061 TGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTAGCCT 177120
| ||| ||| ||||| | ||||| |||| || | ||| || | | ||||
Sbjct 25170420 AACTGTGAGCA--GAGCAAACATCTGGACCTGGCCATGGCAGTGACAGAAGTAATCGCCT 25170477
Query 177121 ACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAGAAGAC 177180
|||||||||| ||||||||||| | |||||||| || || || |||| || | | ||
Sbjct 25170478 ACACACACTGCTGCATCAACCCCATCATCTACGCCTTTGTTGGTGAGAGATTCCGGAAAC 25170537
Query 177181 ACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAAGTACATCCCCTTCC 177240
|||| | ||| | ||||||| | |||| ||||||||| |||| ||| | || ||||
Sbjct 25170538 ACCTACATCACCTTTTCCACAGGCATGTGGGCATCTACCTGAGCAAATACCTTCCATTCC 25170597
Query 177241 T 177241
|
Sbjct 25170598 T 25170598
Score = 93.3 bits (102), Expect = 5e-14
Identities = 168/240 (70%), Gaps = 8/240 (3%)
Strand=Plus/Plus
Query 10057 AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTT 10116
||||||||| |||||||| | |||||||||||| ||||||| | | ||| || ||||
Sbjct 25288623 AAGAAGAAGCACAAGGCCGTAAGGCTCATCTTTACCATCATGATTGTCTACTTCCTTTTC 25288682
Query 10117 TGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTTAACCTG 10176
||| | |||||||||||||| || ||| | ||||| || | | || || ||||
Sbjct 25288683 TGGGCTCCCTACAACATTGTCCTTGACCTGACCACCTTCCA-GGAGTTCT--TTGGCCTG 25288739
Query 10177 CA-GTGTGCATTGAGCAGTAAC---TTGGACATGGCTCTGCTGATAACAAAAACAGTAGC 10232
| ||| | ||| |||| ||||| || ||| | | || | || | |
Sbjct 25288740 GATAATTGCGAT-AGCTCTAACAGGCTGGACCAAGCCATGCAGGTGACGGAGACTCTTGG 25288798
Query 10233 CTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAGAAG 10292
|||||||| ||||||||||| | ||||| || ||||| ||||||||||| |||||
Sbjct 25288799 GATGACACACTGCTGCATCAACCCCATCATCTATGCCTTCGTCGGGGAGAAGTTCAGAAG 25288858
Score = 93.3 bits (102), Expect = 5e-14
Identities = 168/240 (70%), Gaps = 8/240 (3%)
Strand=Plus/Plus
Query 176943 AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTT 177002
||||||||| |||||||| | |||||||||||| ||||||| | | ||| || ||||
Sbjct 25288623 AAGAAGAAGCACAAGGCCGTAAGGCTCATCTTTACCATCATGATTGTCTACTTCCTTTTC 25288682
Query 177003 TGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTTAACCTG 177062
||| | |||||||||||||| || ||| | ||||| || | | || || ||||
Sbjct 25288683 TGGGCTCCCTACAACATTGTCCTTGACCTGACCACCTTCCA-GGAGTTCT--TTGGCCTG 25288739
Query 177063 CA-GTGTGCATTGAGCAGTAAC---TTGGACATGGCTCTGCTGATAACAAAAACAGTAGC 177118
| ||| | ||| |||| ||||| || ||| | | || | || | |
Sbjct 25288740 GATAATTGCGAT-AGCTCTAACAGGCTGGACCAAGCCATGCAGGTGACGGAGACTCTTGG 25288798
Query 177119 CTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAGAAG 177178
|||||||| ||||||||||| | ||||| || ||||| ||||||||||| |||||
Sbjct 25288799 GATGACACACTGCTGCATCAACCCCATCATCTATGCCTTCGTCGGGGAGAAGTTCAGAAG 25288858
Score = 89.7 bits (98), Expect = 6e-13
Identities = 196/293 (67%), Gaps = 3/293 (1%)
Strand=Plus/Minus
Query 176373 CTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATAC 176432
|| |||||| || ||| || | ||||| ||| | ||||| | | |||| ||||
Sbjct 25098849 CTGGTGTTTGTCACTGGCCTGGTTGGCAACATCCTGGTGGTCTTGGTCCTCATGCAATAC 25098790
Query 176433 ATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTA 176492
| || | ||| || | | || | ||| | || | ||| |||| || ||||| ||||
Sbjct 25098789 AAGAGGCTCAGAAGCGTGACCAGCATCTACCTCCTCAACCTGGCCATTTCTGATCTGCTC 25098730
Query 176493 TTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTT 176552
|| ||||| || |||| || ||||| |||||| | || | || | ||| |||||
Sbjct 25098729 TTCCTTTTCACGCTGCCCTTCTGGATTGACTATAA---ACTGAAGGATAACTGGGCTTTT 25098673
Query 176553 GGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTC 176612
||| | |||| ||| | ||| || | | |||||| | ||||| || ||
Sbjct 25098672 GGTGAGGTCATGTGCAAATTCCTCTCAGGGTTTTATTACATAGGCTTATACAGTGAGATC 25098613
Query 176613 TTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGT 176665
|||| |||||||||||| || | |||||||| || || | ||| | |||||
Sbjct 25098612 TTTTTCATCATCCTGCTGACGTTCGACAGGTACCTGGCCATCGTCCACGCTGT 25098560
Score = 89.7 bits (98), Expect = 6e-13
Identities = 196/293 (67%), Gaps = 3/293 (1%)
Strand=Plus/Minus
Query 9487 CTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATAC 9546
|| |||||| || ||| || | ||||| ||| | ||||| | | |||| ||||
Sbjct 25098849 CTGGTGTTTGTCACTGGCCTGGTTGGCAACATCCTGGTGGTCTTGGTCCTCATGCAATAC 25098790
Query 9547 ATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTA 9606
| || | ||| || | | || | ||| | || | ||| |||| || ||||| ||||
Sbjct 25098789 AAGAGGCTCAGAAGCGTGACCAGCATCTACCTCCTCAACCTGGCCATTTCTGATCTGCTC 25098730
Query 9607 TTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTT 9666
|| ||||| || |||| || ||||| |||||| | || | || | ||| |||||
Sbjct 25098729 TTCCTTTTCACGCTGCCCTTCTGGATTGACTATAA---ACTGAAGGATAACTGGGCTTTT 25098673
Query 9667 GGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTC 9726
||| | |||| ||| | ||| || | | |||||| | ||||| || ||
Sbjct 25098672 GGTGAGGTCATGTGCAAATTCCTCTCAGGGTTTTATTACATAGGCTTATACAGTGAGATC 25098613
Query 9727 TTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGT 9779
|||| |||||||||||| || | |||||||| || || | ||| | |||||
Sbjct 25098612 TTTTTCATCATCCTGCTGACGTTCGACAGGTACCTGGCCATCGTCCACGCTGT 25098560
>seq256
Length=2651488
Score = 170 bits (188), Expect = 2e-37
Identities = 144/177 (81%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 145752 GCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCAC 145811
||| |||| ||| || | ||||||||| ||||||| ||||||||| |||||||| |||||
Sbjct 779450 GCCGGTGATGTGTGCAATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAAGGCAC 779391
Query 145812 CCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCAC 145871
|||||| |||||||| || || | |||||||||||||||||| ||||| || | ||||
Sbjct 779390 CCCCAGGCCCATGTCGCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACCAC 779331
Query 145872 GTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928
||||||||||| ||| ||||||||| ||||| ||||| || ||||| || ||
Sbjct 779330 ATAGAACTGGCAAAGGGCGTGGCAGGGAGGCAGCGCCATCTGAGGAAGGTCTGCGGG 779274
>seq35
Length=20596549
Score = 165 bits (182), Expect = 1e-35
Identities = 131/157 (83%), Gaps = 3/157 (2%)
Strand=Plus/Minus
Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141
||||||| ||||||| ||||||||||| | ||||||||||||||||||||||| | |||
Sbjct 8448669 CAGCGCCGCAGCCTCGCCCTGAGGGTTGTCAGCTTTTCCCCCAGGGAGTTCACGTGCTCC 8448610
Query 138142 TTTTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACTGG 138201
|| || || || ||||||||| |||| ||||||||| ||||||||||||| | |
Sbjct 8448609 TTGAT---GTTGGGGCCGTGGTTCTCAGCCTTCGGCATCACCACCTCCAGGTAAAATTTG 8448553
Query 138202 ATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCT 138238
|||||||| |||| ||| ||||| |||||||||||||
Sbjct 8448552 ATCATCTCGGACAAGGCTTGGCATCCCAGGTAACCCT 8448516
Score = 118 bits (130), Expect = 1e-21
Identities = 82/93 (88%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 137924 AGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACTCGC 137983
||||||| ||||| | |||||||||| ||||||||||| |||||||||||||| ||||
Sbjct 8450907 AGTTTTTTATCTTCATTGTCATGTAGGTTTCTATGTAGTTGATGAAGATGTCAAATTCGC 8450848
Query 137984 TCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016
|||||||||||||||| ||||| || |||||||
Sbjct 8450847 TCATGGCCTTGTAGACACCTTTCTCTTGGAGCT 8450815
Score = 104 bits (114), Expect = 3e-17
Identities = 127/170 (75%), Gaps = 4/170 (2%)
Strand=Plus/Minus
Query 138297 AAAGAAGGTCTTTACCCTGCTGAAGGCGGCCCTGAGCTCGTGGAGCATGTGGGGCAGGCT 138356
|||||| ||||| |||||| ||||||| || |||||| ||||||||||||||||||
Sbjct 8447348 AAAGAAAGTCTTCACCCTGTTGAAGGCCATCCGGAGCTCTCTGAGCATGTGGGGCAGGCT 8447289
Query 138357 G-GTGGGCAATGTAGG-GCAGTCGTCCCCAGACTCACTGTCATATTTGTTGTCGGCCCAC 138414
| ||||| | ||||| |||| || | |||||| ||| | | | | ||||| |
Sbjct 8447288 GTGTGGG--AAGTAGGTGCAGCTGTTCTCAGACTGGGGGTCCTGGCTCTGGCTGGCCCCC 8447231
Query 138415 ACCCCGGCCAGGAGAACCAGGCAACACAGCAGCGATGCCCTGAACATGGC 138464
||||| ||||||| ||||||||||| ||||| | || | | ||||||
Sbjct 8447230 ACCCCAGCCAGGAAGACCAGGCAACATAGCAGTGCTGAGCGGTGCATGGC 8447181
Score = 82.4 bits (90), Expect = 9e-11
Identities = 121/169 (72%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 138297 AAAGAAGGTCTTTACCCTGCTGAAGGCGGCCCTGAGCTCGTGGAGCATGTGGGGCAGGCT 138356
|||| | |||| |||||| |||||| || |||||| |||||| ||||||||||||
Sbjct 8649478 AAAGGAAGTCTCCACCCTGTCGAAGGCCATCCGGAGCTCTCGGAGCACGTGGGGCAGGCT 8649537
Query 138357 GGTGGGCAATGTAGG-GCAGTCGTCCCCAGACTCACTGTCATATTTGTTGTCGGCCCACA 138415
| || || ||||| |||| || | |||||| ||| | | | | || || ||
Sbjct 8649538 GCCTGGGAA-GTAGGTGCAGCTGTTCTCAGACTGGGGGTCCTGGCTCTGGCTGGTCCCCA 8649596
Query 138416 CCCCGGCCAGGAGAACCAGGCAACACAGCAGCGATGCCCTGAACATGGC 138464
|||| ||||||| ||||||||||| ||||| | || | | ||||||
Sbjct 8649597 CCCCAGCCAGGAAGACCAGGCAACATAGCAGTGCTGAGCGGTGCATGGC 8649645
>seq4
Length=36583390
Score = 138 bits (152), Expect = 1e-27
Identities = 493/757 (65%), Gaps = 23/757 (3%)
Strand=Plus/Minus
Query 145590 AAAGTCCTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGGG 145649
|||||| || | |||| ||||| || ||| || || || || |||||| ||||
Sbjct 19718378 AAAGTCTTCAACTTTGAATTCATCAATTGTCTCAACTTCCCGAAGAATGCTGAGCTTGGG 19718319
Query 145650 -AAAGGGCCGGGGGCTC-CTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAG 145707
||||| | || ||| |||| ||||| | ||||||||||| ||| || || |
Sbjct 19718318 GAAAGGTCTTGGTTCTCTCTGG--AGCTGAACTTTCAGGGGCTCAGTGTGATTCTGGAAA 19718261
Query 145708 ACGTGCGCGTCCCCCAGGACGTGGATG--AAGTCCCCGGGCTCGAGGCCCGTGAGGTGGG 145765
| | || || |||| | || || ||||| | |||| ||||| ||| ||| |
Sbjct 19718260 ATAGGTGCATCTCCCA--AAGTATATTCAAAGTCACGTGGCTTCAGGCCTATGATGTGTG 19718203
Query 145766 CGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGT 145825
|||| ||||||| | | ||| |||||||| ||| |||| || |||||||| |||||||
Sbjct 19718202 CGAC--TGTAGGTGAACTGGGCATAGCTGGCAATGGTGAAAGGTACCCCCAGGCCCATGT 19718145
Query 145826 CCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACA 145885
|| || | ||| ||||||||||||| ||||| | | | |||| |||||||||| |
Sbjct 19718144 ATCCTGACCTCTGCTACAGCTGGCAGGTCAGCTCACTGTTCACCACAGAGAACTGGCAAA 19718085
Query 145886 GGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGA 145945
|| |||||||| | || ||| | || ||| | || ||| | ||| | ||
Sbjct 19718084 GGGCATGGCAGGGAGTTAGCGCCGTCTGAGGAAGGCCTTGTGGATTCTAAGCGCACATGA 19718025
Query 145946 CGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCT----GAGCTGG 146001
|| || ||| | || ||||| | ||||| | |||| ||| ||||||
Sbjct 19718024 TGATTCTTCTG-TGTCAGGGTTGGTTTTGAT----TGTGTCAGTAACCTTTTGCAGCTGG 19717970
Query 146002 TCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTC 146061
|| || || || || ||||| || || || | ||| | || ||||||
Sbjct 19717969 TCTACTCCTTGACCTACACCATCTGAATTCAGATCTTTATATTCTGCCTCAAAATGCCTC 19717910
Query 146062 CACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC-CCTGTGCCCCAGCCCGGCCCG 146120
||||| || || || || || || || || || | ||| | ||| | |
Sbjct 19717909 CACTGAAAGCCATAAACTGGGCCTGAATCTCCTTCTTCTCAGGTGAAGAATCCCAG-GCT 19717851
Query 146121 GGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTC 146180
| | | ||||| |||||||| |||| ||||||||||| || ||| | | || || ||
Sbjct 19717850 GTCCAAAAAGTCTCGGGACCCACTGGCATCCCAGATCTTCACTCCCTTGGAAGACAGTTC 19717791
Query 146181 ATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAA 146240
| | | ||||| || |||| ||| |||| |||||| | || || | || ||
Sbjct 19717790 TCTAGCATTGGTGGA-TCCTTGATACGCCACAGCAACTCTTCCACAACACCTGTGCA-AA 19717733
Query 146241 GACCCTCTTGGTGGTCAGCAGGGGGAACTGGCCCCGCAGGGAGTACTTGGCCTGGTCCCC 146300
|| | |||||| |||||||| || |||| | | |||| ||| | ||||| ||
Sbjct 19717732 CACACGCTTGGTTGTCAGCAGAGGAAACTCATCTCTCAGGTTGTAGTGTGCCTGCATGCC 19717673
Query 146301 GAAGACGGACAGGGTGCCCACGCCCGTCCTGTCCCCC 146337
|| | || |||||| || |||| | | |||| ||
Sbjct 19717672 AAACATGGGCAGGGTACCGGTGCCCATGCAGTCCTCC 19717636
>seq16
Length=28134011
Score = 127 bits (140), Expect = 2e-24
Identities = 195/272 (72%), Gaps = 7/272 (3%)
Strand=Plus/Plus
Query 145633 AGGATCCTGAGCCTGGG-AAAGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTC 145691
|| || |||||| |||| ||||| | || ||| | | ||||| | |||||||||||
Sbjct 9569073 AGAATGCTGAGCTTGGGGAAAGGTCTTGGTTCTCGAG-TGAGCTGAACTTTCAGGGGCTC 9569131
Query 145692 CACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAG 145751
| ||| || ||||| | || || || |||| || | ||||| || |||| ||
Sbjct 9569132 AATGTGATTCAGGTAAATATGTGCATCTCCCAAAGTATGCACAAAGTCACCTGGCTTCAG 9569191
Query 145752 GCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCAC 145811
|| | | | ||| | |||||||| |||||| | ||||||| |||||||| ||||
Sbjct 9569192 GCTCATTATGTGTTTGGTTATGTAGGTGAGCAGGTGGAAGCTGGCCATGTTGAAAGGCA- 9569250
Query 145812 CCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCAC 145871
|||||| |||||||| || || |||||| ||||||||||| ||||| | | ||
Sbjct 9569251 CCCCAGGCCCATGTCTCCTGACTTCTGGTA-AGCTGGCAGGACAGCTCACTG---TTCAT 9569306
Query 145872 GTAGAACTGGCACAGGAGGTGGCAGGGCGGCA 145903
|||| ||||||| |||| ||||| || ||||
Sbjct 9569307 GTAGGACTGGCAAAGGACTTGGCAAGGAGGCA 9569338
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590030161804920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |