Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202 012-01-23] 6,323 sequences; 3,103,808,406 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1 379 2e-100 seq256 170 2e-37 seq35 165 1e-35 seq4 138 1e-27 seq16 127 2e-24 >seq1 Length=45942467 Score = 379 bits (420), Expect = 2e-100 Identities = 630/901 (70%), Gaps = 13/901 (1%) Strand=Plus/Plus Query 9460 GCTCAGGTGGTACCCGCCCTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATC 9519 || ||| || | ||| | |||||| || ||||| | |||| ||||||||||| | Sbjct 25169706 GCCCAGTTGCTGCCCCCGCTGTATTCCCTGGTGTTCATTGTTGGCCTGTTGGGCAATGTG 25169765 Query 9520 TTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTG 9579 | |||||| | || ||| || ||| || | ||| || | || ||||| | ||| Sbjct 25169766 GTGGTGGTGCTGATCCTCACAAAATATGGGAGGCTCAGAATTATGACCAACATCTACCTG 25169825 Query 9580 TTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTAT 9639 | |||||||| || ||||||||||| ||||| | ||| | ||||| ||||| |||||| Sbjct 25169826 CTCAACTTGGCGATTTCTGACTTGCTCTTTCTAGTCACTCTTCCATTCTGGATTCACTAT 25169885 Query 9640 ATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTG 9699 ||||| || | || | ||| |||||| || | ||||||| | ||| || | Sbjct 25169886 GTTGGA-TGGAACAAG--TGGGTTTTTGGCCATTACATGTGTAAGTTCCTCTCAGGATTT 25169942 Query 9700 TGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTAT 9759 | | |||| ||||||| || |||||| |||| ||||||| || | |||||||| Sbjct 25169943 TATCACATAGGCTTGTACAGTGAGATCTTTTTCATCGTCCTGCTGACGATCGACAGGTAC 25170002 Query 9760 CTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCATAGTT 9819 || || ||||| ||||||| | | || || | | || || |||| ||| || | Sbjct 25170003 CTGGCCATTGTCCATGCTGTGTTTTCCCTGCGGGTCCGGACTGTCACCTTTGGTATCATA 25170062 Query 9820 ACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCAT 9879 ||| || | | |||||| | ||||||||| | | |||||||||||||| |||| | | Sbjct 25170063 ACCAGTATCTTCACCTGGGTCCTGGCAGGGCTAGCGGCCCTCCCTGAATTTATCTTCCGT 25170122 Query 9880 GGACACCAAGATGACAATGGTAGGGTTCAGTGTGA--TCCTTACTACCCAGAG-ATGTCT 9936 | |||||| || ||| | || || || |||||| ||||||||| ||| Sbjct 25170123 GAGTTCCAAGAGGAGGATG--AACACTCTGTCTGCAGTCCTTATTACCCAGAGGATGAAG 25170180 Query 9937 ACAAATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCT 9996 | | || |||| ||| ||| | | | ||| ||| || |||| | | ||| Sbjct 25170181 A-AGATACCTGGAAGCGTTTCCATGCTCTGAGAATGAGTATCTTGGGTCTTGCTGTCCCT 25170239 Query 9997 CTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGC 10056 || |||||||||||| ||||||||| | ||| || | || ||| |||| |||| || Sbjct 25170240 CTACTCATTATGGCTATCTGCTACTCAGGAATCATTAAAACGCTGCTGAGATGCCCTAGT 25170299 Query 10057 AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTT 10116 | || ||||||||||||||| ||||||| |||||||||||||||| || ||| |||| Sbjct 25170300 AGAAAAAAGTACAAGGCCATCCGGCTCATTTTTGTCATCATGGTGGTCTTTTTCATTTTC 25170359 Query 10117 TGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTT--AACC 10174 ||||||||||||||| | |||||||| || ||||| ||||| | ||||| | | | | Sbjct 25170360 TGGACACCCTACAACCTGGTTCTCCTTCTTTCTACTTTTCAAGTGACCCTCCCTGAGAAC 25170419 Query 10175 TGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTAGCCT 10234 | ||| ||| ||||| | ||||| |||| || | ||| || | | |||| Sbjct 25170420 AACTGTGAGCA--GAGCAAACATCTGGACCTGGCCATGGCAGTGACAGAAGTAATCGCCT 25170477 Query 10235 ACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAGAAGAC 10294 |||||||||| ||||||||||| | |||||||| || || || |||| || | | || Sbjct 25170478 ACACACACTGCTGCATCAACCCCATCATCTACGCCTTTGTTGGTGAGAGATTCCGGAAAC 25170537 Query 10295 ACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAAGTACATCCCCTTCC 10354 |||| | ||| | ||||||| | |||| ||||||||| |||| ||| | || |||| Sbjct 25170538 ACCTACATCACCTTTTCCACAGGCATGTGGGCATCTACCTGAGCAAATACCTTCCATTCC 25170597 Query 10355 T 10355 | Sbjct 25170598 T 25170598 Score = 379 bits (420), Expect = 2e-100 Identities = 630/901 (70%), Gaps = 13/901 (1%) Strand=Plus/Plus Query 176346 GCTCAGGTGGTACCCGCCCTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATC 176405 || ||| || | ||| | |||||| || ||||| | |||| ||||||||||| | Sbjct 25169706 GCCCAGTTGCTGCCCCCGCTGTATTCCCTGGTGTTCATTGTTGGCCTGTTGGGCAATGTG 25169765 Query 176406 TTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTG 176465 | |||||| | || ||| || ||| || | ||| || | || ||||| | ||| Sbjct 25169766 GTGGTGGTGCTGATCCTCACAAAATATGGGAGGCTCAGAATTATGACCAACATCTACCTG 25169825 Query 176466 TTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTAT 176525 | |||||||| || ||||||||||| ||||| | ||| | ||||| ||||| |||||| Sbjct 25169826 CTCAACTTGGCGATTTCTGACTTGCTCTTTCTAGTCACTCTTCCATTCTGGATTCACTAT 25169885 Query 176526 ATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTG 176585 ||||| || | || | ||| |||||| || | ||||||| | ||| || | Sbjct 25169886 GTTGGA-TGGAACAAG--TGGGTTTTTGGCCATTACATGTGTAAGTTCCTCTCAGGATTT 25169942 Query 176586 TGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTAT 176645 | | |||| ||||||| || |||||| |||| ||||||| || | |||||||| Sbjct 25169943 TATCACATAGGCTTGTACAGTGAGATCTTTTTCATCGTCCTGCTGACGATCGACAGGTAC 25170002 Query 176646 CTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCATAGTT 176705 || || ||||| ||||||| | | || || | | || || |||| ||| || | Sbjct 25170003 CTGGCCATTGTCCATGCTGTGTTTTCCCTGCGGGTCCGGACTGTCACCTTTGGTATCATA 25170062 Query 176706 ACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCAT 176765 ||| || | | |||||| | ||||||||| | | |||||||||||||| |||| | | Sbjct 25170063 ACCAGTATCTTCACCTGGGTCCTGGCAGGGCTAGCGGCCCTCCCTGAATTTATCTTCCGT 25170122 Query 176766 GGACACCAAGATGACAATGGTAGGGTTCAGTGTGA--TCCTTACTACCCAGAG-ATGTCT 176822 | |||||| || ||| | || || || |||||| ||||||||| ||| Sbjct 25170123 GAGTTCCAAGAGGAGGATG--AACACTCTGTCTGCAGTCCTTATTACCCAGAGGATGAAG 25170180 Query 176823 ACAAATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCT 176882 | | || |||| ||| ||| | | | ||| ||| || |||| | | ||| Sbjct 25170181 A-AGATACCTGGAAGCGTTTCCATGCTCTGAGAATGAGTATCTTGGGTCTTGCTGTCCCT 25170239 Query 176883 CTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGC 176942 || |||||||||||| ||||||||| | ||| || | || ||| |||| |||| || Sbjct 25170240 CTACTCATTATGGCTATCTGCTACTCAGGAATCATTAAAACGCTGCTGAGATGCCCTAGT 25170299 Query 176943 AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTT 177002 | || ||||||||||||||| ||||||| |||||||||||||||| || ||| |||| Sbjct 25170300 AGAAAAAAGTACAAGGCCATCCGGCTCATTTTTGTCATCATGGTGGTCTTTTTCATTTTC 25170359 Query 177003 TGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTT--AACC 177060 ||||||||||||||| | |||||||| || ||||| ||||| | ||||| | | | | Sbjct 25170360 TGGACACCCTACAACCTGGTTCTCCTTCTTTCTACTTTTCAAGTGACCCTCCCTGAGAAC 25170419 Query 177061 TGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTAGCCT 177120 | ||| ||| ||||| | ||||| |||| || | ||| || | | |||| Sbjct 25170420 AACTGTGAGCA--GAGCAAACATCTGGACCTGGCCATGGCAGTGACAGAAGTAATCGCCT 25170477 Query 177121 ACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAGAAGAC 177180 |||||||||| ||||||||||| | |||||||| || || || |||| || | | || Sbjct 25170478 ACACACACTGCTGCATCAACCCCATCATCTACGCCTTTGTTGGTGAGAGATTCCGGAAAC 25170537 Query 177181 ACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAAGTACATCCCCTTCC 177240 |||| | ||| | ||||||| | |||| ||||||||| |||| ||| | || |||| Sbjct 25170538 ACCTACATCACCTTTTCCACAGGCATGTGGGCATCTACCTGAGCAAATACCTTCCATTCC 25170597 Query 177241 T 177241 | Sbjct 25170598 T 25170598 Score = 93.3 bits (102), Expect = 5e-14 Identities = 168/240 (70%), Gaps = 8/240 (3%) Strand=Plus/Plus Query 10057 AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTT 10116 ||||||||| |||||||| | |||||||||||| ||||||| | | ||| || |||| Sbjct 25288623 AAGAAGAAGCACAAGGCCGTAAGGCTCATCTTTACCATCATGATTGTCTACTTCCTTTTC 25288682 Query 10117 TGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTTAACCTG 10176 ||| | |||||||||||||| || ||| | ||||| || | | || || |||| Sbjct 25288683 TGGGCTCCCTACAACATTGTCCTTGACCTGACCACCTTCCA-GGAGTTCT--TTGGCCTG 25288739 Query 10177 CA-GTGTGCATTGAGCAGTAAC---TTGGACATGGCTCTGCTGATAACAAAAACAGTAGC 10232 | ||| | ||| |||| ||||| || ||| | | || | || | | Sbjct 25288740 GATAATTGCGAT-AGCTCTAACAGGCTGGACCAAGCCATGCAGGTGACGGAGACTCTTGG 25288798 Query 10233 CTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAGAAG 10292 |||||||| ||||||||||| | ||||| || ||||| ||||||||||| ||||| Sbjct 25288799 GATGACACACTGCTGCATCAACCCCATCATCTATGCCTTCGTCGGGGAGAAGTTCAGAAG 25288858 Score = 93.3 bits (102), Expect = 5e-14 Identities = 168/240 (70%), Gaps = 8/240 (3%) Strand=Plus/Plus Query 176943 AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTT 177002 ||||||||| |||||||| | |||||||||||| ||||||| | | ||| || |||| Sbjct 25288623 AAGAAGAAGCACAAGGCCGTAAGGCTCATCTTTACCATCATGATTGTCTACTTCCTTTTC 25288682 Query 177003 TGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTTAACCTG 177062 ||| | |||||||||||||| || ||| | ||||| || | | || || |||| Sbjct 25288683 TGGGCTCCCTACAACATTGTCCTTGACCTGACCACCTTCCA-GGAGTTCT--TTGGCCTG 25288739 Query 177063 CA-GTGTGCATTGAGCAGTAAC---TTGGACATGGCTCTGCTGATAACAAAAACAGTAGC 177118 | ||| | ||| |||| ||||| || ||| | | || | || | | Sbjct 25288740 GATAATTGCGAT-AGCTCTAACAGGCTGGACCAAGCCATGCAGGTGACGGAGACTCTTGG 25288798 Query 177119 CTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAGAAG 177178 |||||||| ||||||||||| | ||||| || ||||| ||||||||||| ||||| Sbjct 25288799 GATGACACACTGCTGCATCAACCCCATCATCTATGCCTTCGTCGGGGAGAAGTTCAGAAG 25288858 Score = 89.7 bits (98), Expect = 6e-13 Identities = 196/293 (67%), Gaps = 3/293 (1%) Strand=Plus/Minus Query 176373 CTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATAC 176432 || |||||| || ||| || | ||||| ||| | ||||| | | |||| |||| Sbjct 25098849 CTGGTGTTTGTCACTGGCCTGGTTGGCAACATCCTGGTGGTCTTGGTCCTCATGCAATAC 25098790 Query 176433 ATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTA 176492 | || | ||| || | | || | ||| | || | ||| |||| || ||||| |||| Sbjct 25098789 AAGAGGCTCAGAAGCGTGACCAGCATCTACCTCCTCAACCTGGCCATTTCTGATCTGCTC 25098730 Query 176493 TTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTT 176552 || ||||| || |||| || ||||| |||||| | || | || | ||| ||||| Sbjct 25098729 TTCCTTTTCACGCTGCCCTTCTGGATTGACTATAA---ACTGAAGGATAACTGGGCTTTT 25098673 Query 176553 GGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTC 176612 ||| | |||| ||| | ||| || | | |||||| | ||||| || || Sbjct 25098672 GGTGAGGTCATGTGCAAATTCCTCTCAGGGTTTTATTACATAGGCTTATACAGTGAGATC 25098613 Query 176613 TTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGT 176665 |||| |||||||||||| || | |||||||| || || | ||| | ||||| Sbjct 25098612 TTTTTCATCATCCTGCTGACGTTCGACAGGTACCTGGCCATCGTCCACGCTGT 25098560 Score = 89.7 bits (98), Expect = 6e-13 Identities = 196/293 (67%), Gaps = 3/293 (1%) Strand=Plus/Minus Query 9487 CTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATAC 9546 || |||||| || ||| || | ||||| ||| | ||||| | | |||| |||| Sbjct 25098849 CTGGTGTTTGTCACTGGCCTGGTTGGCAACATCCTGGTGGTCTTGGTCCTCATGCAATAC 25098790 Query 9547 ATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTA 9606 | || | ||| || | | || | ||| | || | ||| |||| || ||||| |||| Sbjct 25098789 AAGAGGCTCAGAAGCGTGACCAGCATCTACCTCCTCAACCTGGCCATTTCTGATCTGCTC 25098730 Query 9607 TTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTT 9666 || ||||| || |||| || ||||| |||||| | || | || | ||| ||||| Sbjct 25098729 TTCCTTTTCACGCTGCCCTTCTGGATTGACTATAA---ACTGAAGGATAACTGGGCTTTT 25098673 Query 9667 GGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTC 9726 ||| | |||| ||| | ||| || | | |||||| | ||||| || || Sbjct 25098672 GGTGAGGTCATGTGCAAATTCCTCTCAGGGTTTTATTACATAGGCTTATACAGTGAGATC 25098613 Query 9727 TTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGT 9779 |||| |||||||||||| || | |||||||| || || | ||| | ||||| Sbjct 25098612 TTTTTCATCATCCTGCTGACGTTCGACAGGTACCTGGCCATCGTCCACGCTGT 25098560 >seq256 Length=2651488 Score = 170 bits (188), Expect = 2e-37 Identities = 144/177 (81%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 145752 GCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCAC 145811 ||| |||| ||| || | ||||||||| ||||||| ||||||||| |||||||| ||||| Sbjct 779450 GCCGGTGATGTGTGCAATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAAGGCAC 779391 Query 145812 CCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCAC 145871 |||||| |||||||| || || | |||||||||||||||||| ||||| || | |||| Sbjct 779390 CCCCAGGCCCATGTCGCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACCAC 779331 Query 145872 GTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928 ||||||||||| ||| ||||||||| ||||| ||||| || ||||| || || Sbjct 779330 ATAGAACTGGCAAAGGGCGTGGCAGGGAGGCAGCGCCATCTGAGGAAGGTCTGCGGG 779274 >seq35 Length=20596549 Score = 165 bits (182), Expect = 1e-35 Identities = 131/157 (83%), Gaps = 3/157 (2%) Strand=Plus/Minus Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141 ||||||| ||||||| ||||||||||| | ||||||||||||||||||||||| | ||| Sbjct 8448669 CAGCGCCGCAGCCTCGCCCTGAGGGTTGTCAGCTTTTCCCCCAGGGAGTTCACGTGCTCC 8448610 Query 138142 TTTTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACTGG 138201 || || || || ||||||||| |||| ||||||||| ||||||||||||| | | Sbjct 8448609 TTGAT---GTTGGGGCCGTGGTTCTCAGCCTTCGGCATCACCACCTCCAGGTAAAATTTG 8448553 Query 138202 ATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCT 138238 |||||||| |||| ||| ||||| ||||||||||||| Sbjct 8448552 ATCATCTCGGACAAGGCTTGGCATCCCAGGTAACCCT 8448516 Score = 118 bits (130), Expect = 1e-21 Identities = 82/93 (88%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 137924 AGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACTCGC 137983 ||||||| ||||| | |||||||||| ||||||||||| |||||||||||||| |||| Sbjct 8450907 AGTTTTTTATCTTCATTGTCATGTAGGTTTCTATGTAGTTGATGAAGATGTCAAATTCGC 8450848 Query 137984 TCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016 |||||||||||||||| ||||| || ||||||| Sbjct 8450847 TCATGGCCTTGTAGACACCTTTCTCTTGGAGCT 8450815 Score = 104 bits (114), Expect = 3e-17 Identities = 127/170 (75%), Gaps = 4/170 (2%) Strand=Plus/Minus Query 138297 AAAGAAGGTCTTTACCCTGCTGAAGGCGGCCCTGAGCTCGTGGAGCATGTGGGGCAGGCT 138356 |||||| ||||| |||||| ||||||| || |||||| |||||||||||||||||| Sbjct 8447348 AAAGAAAGTCTTCACCCTGTTGAAGGCCATCCGGAGCTCTCTGAGCATGTGGGGCAGGCT 8447289 Query 138357 G-GTGGGCAATGTAGG-GCAGTCGTCCCCAGACTCACTGTCATATTTGTTGTCGGCCCAC 138414 | ||||| | ||||| |||| || | |||||| ||| | | | | ||||| | Sbjct 8447288 GTGTGGG--AAGTAGGTGCAGCTGTTCTCAGACTGGGGGTCCTGGCTCTGGCTGGCCCCC 8447231 Query 138415 ACCCCGGCCAGGAGAACCAGGCAACACAGCAGCGATGCCCTGAACATGGC 138464 ||||| ||||||| ||||||||||| ||||| | || | | |||||| Sbjct 8447230 ACCCCAGCCAGGAAGACCAGGCAACATAGCAGTGCTGAGCGGTGCATGGC 8447181 Score = 82.4 bits (90), Expect = 9e-11 Identities = 121/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 138297 AAAGAAGGTCTTTACCCTGCTGAAGGCGGCCCTGAGCTCGTGGAGCATGTGGGGCAGGCT 138356 |||| | |||| |||||| |||||| || |||||| |||||| |||||||||||| Sbjct 8649478 AAAGGAAGTCTCCACCCTGTCGAAGGCCATCCGGAGCTCTCGGAGCACGTGGGGCAGGCT 8649537 Query 138357 GGTGGGCAATGTAGG-GCAGTCGTCCCCAGACTCACTGTCATATTTGTTGTCGGCCCACA 138415 | || || ||||| |||| || | |||||| ||| | | | | || || || Sbjct 8649538 GCCTGGGAA-GTAGGTGCAGCTGTTCTCAGACTGGGGGTCCTGGCTCTGGCTGGTCCCCA 8649596 Query 138416 CCCCGGCCAGGAGAACCAGGCAACACAGCAGCGATGCCCTGAACATGGC 138464 |||| ||||||| ||||||||||| ||||| | || | | |||||| Sbjct 8649597 CCCCAGCCAGGAAGACCAGGCAACATAGCAGTGCTGAGCGGTGCATGGC 8649645 >seq4 Length=36583390 Score = 138 bits (152), Expect = 1e-27 Identities = 493/757 (65%), Gaps = 23/757 (3%) Strand=Plus/Minus Query 145590 AAAGTCCTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGGG 145649 |||||| || | |||| ||||| || ||| || || || || |||||| |||| Sbjct 19718378 AAAGTCTTCAACTTTGAATTCATCAATTGTCTCAACTTCCCGAAGAATGCTGAGCTTGGG 19718319 Query 145650 -AAAGGGCCGGGGGCTC-CTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAG 145707 ||||| | || ||| |||| ||||| | ||||||||||| ||| || || | Sbjct 19718318 GAAAGGTCTTGGTTCTCTCTGG--AGCTGAACTTTCAGGGGCTCAGTGTGATTCTGGAAA 19718261 Query 145708 ACGTGCGCGTCCCCCAGGACGTGGATG--AAGTCCCCGGGCTCGAGGCCCGTGAGGTGGG 145765 | | || || |||| | || || ||||| | |||| ||||| ||| ||| | Sbjct 19718260 ATAGGTGCATCTCCCA--AAGTATATTCAAAGTCACGTGGCTTCAGGCCTATGATGTGTG 19718203 Query 145766 CGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGT 145825 |||| ||||||| | | ||| |||||||| ||| |||| || |||||||| ||||||| Sbjct 19718202 CGAC--TGTAGGTGAACTGGGCATAGCTGGCAATGGTGAAAGGTACCCCCAGGCCCATGT 19718145 Query 145826 CCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACA 145885 || || | ||| ||||||||||||| ||||| | | | |||| |||||||||| | Sbjct 19718144 ATCCTGACCTCTGCTACAGCTGGCAGGTCAGCTCACTGTTCACCACAGAGAACTGGCAAA 19718085 Query 145886 GGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGA 145945 || |||||||| | || ||| | || ||| | || ||| | ||| | || Sbjct 19718084 GGGCATGGCAGGGAGTTAGCGCCGTCTGAGGAAGGCCTTGTGGATTCTAAGCGCACATGA 19718025 Query 145946 CGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCT----GAGCTGG 146001 || || ||| | || ||||| | ||||| | |||| ||| |||||| Sbjct 19718024 TGATTCTTCTG-TGTCAGGGTTGGTTTTGAT----TGTGTCAGTAACCTTTTGCAGCTGG 19717970 Query 146002 TCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTC 146061 || || || || || ||||| || || || | ||| | || |||||| Sbjct 19717969 TCTACTCCTTGACCTACACCATCTGAATTCAGATCTTTATATTCTGCCTCAAAATGCCTC 19717910 Query 146062 CACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC-CCTGTGCCCCAGCCCGGCCCG 146120 ||||| || || || || || || || || || | ||| | ||| | | Sbjct 19717909 CACTGAAAGCCATAAACTGGGCCTGAATCTCCTTCTTCTCAGGTGAAGAATCCCAG-GCT 19717851 Query 146121 GGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTC 146180 | | | ||||| |||||||| |||| ||||||||||| || ||| | | || || || Sbjct 19717850 GTCCAAAAAGTCTCGGGACCCACTGGCATCCCAGATCTTCACTCCCTTGGAAGACAGTTC 19717791 Query 146181 ATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAA 146240 | | | ||||| || |||| ||| |||| |||||| | || || | || || Sbjct 19717790 TCTAGCATTGGTGGA-TCCTTGATACGCCACAGCAACTCTTCCACAACACCTGTGCA-AA 19717733 Query 146241 GACCCTCTTGGTGGTCAGCAGGGGGAACTGGCCCCGCAGGGAGTACTTGGCCTGGTCCCC 146300 || | |||||| |||||||| || |||| | | |||| ||| | ||||| || Sbjct 19717732 CACACGCTTGGTTGTCAGCAGAGGAAACTCATCTCTCAGGTTGTAGTGTGCCTGCATGCC 19717673 Query 146301 GAAGACGGACAGGGTGCCCACGCCCGTCCTGTCCCCC 146337 || | || |||||| || |||| | | |||| || Sbjct 19717672 AAACATGGGCAGGGTACCGGTGCCCATGCAGTCCTCC 19717636 >seq16 Length=28134011 Score = 127 bits (140), Expect = 2e-24 Identities = 195/272 (72%), Gaps = 7/272 (3%) Strand=Plus/Plus Query 145633 AGGATCCTGAGCCTGGG-AAAGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTC 145691 || || |||||| |||| ||||| | || ||| | | ||||| | ||||||||||| Sbjct 9569073 AGAATGCTGAGCTTGGGGAAAGGTCTTGGTTCTCGAG-TGAGCTGAACTTTCAGGGGCTC 9569131 Query 145692 CACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAG 145751 | ||| || ||||| | || || || |||| || | ||||| || |||| || Sbjct 9569132 AATGTGATTCAGGTAAATATGTGCATCTCCCAAAGTATGCACAAAGTCACCTGGCTTCAG 9569191 Query 145752 GCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCAC 145811 || | | | ||| | |||||||| |||||| | ||||||| |||||||| |||| Sbjct 9569192 GCTCATTATGTGTTTGGTTATGTAGGTGAGCAGGTGGAAGCTGGCCATGTTGAAAGGCA- 9569250 Query 145812 CCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCAC 145871 |||||| |||||||| || || |||||| ||||||||||| ||||| | | || Sbjct 9569251 CCCCAGGCCCATGTCTCCTGACTTCTGGTA-AGCTGGCAGGACAGCTCACTG---TTCAT 9569306 Query 145872 GTAGAACTGGCACAGGAGGTGGCAGGGCGGCA 145903 |||| ||||||| |||| ||||| || |||| Sbjct 9569307 GTAGGACTGGCAAAGGACTTGGCAAGGAGGCA 9569338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590030161804920